RNA–Protein interactions for RNA: ENST00000463216.5

TTC3-212, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 842 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-212ENST00000463216 FPGSQ05932 587 aa28.38■■■□□ 2.13
TTC3-212ENST00000463216 RNPC3Q96LT9 517 aaKnown RBP28.38■■■□□ 2.13
TTC3-212ENST00000463216 GUCD1Q96NT3 240 aa28.38■■■□□ 2.13
TTC3-212ENST00000463216 TMEM47Q9BQJ4 181 aa28.38■■■□□ 2.13
TTC3-212ENST00000463216 KATNBL1Q9H079 304 aa28.38■■■□□ 2.13
TTC3-212ENST00000463216 UPF3AQ9H1J1 476 aaKnown RBP28.38■■■□□ 2.13
TTC3-212ENST00000463216 CCDC171Q6TFL3 1326 aa28.38■■■□□ 2.13
TTC3-212ENST00000463216 FGRP09769 529 aa28.37■■■□□ 2.13
TTC3-212ENST00000463216 TOP1P11387 765 aaKnown RBP28.37■■■□□ 2.13
TTC3-212ENST00000463216 EPHB4P54760 987 aa28.37■■■□□ 2.13
TTC3-212ENST00000463216 CYP39A1Q9NYL5 469 aa28.37■■■□□ 2.13
TTC3-212ENST00000463216 ELP1O95163 1332 aa28.37■■■□□ 2.13
TTC3-212ENST00000463216 ICAM1P05362 532 aa28.36■■■□□ 2.13
TTC3-212ENST00000463216 SYDE2Q5VT97 1194 aa28.36■■■□□ 2.13
TTC3-212ENST00000463216 MFSD6Q6ZSS7 791 aa28.36■■■□□ 2.13
TTC3-212ENST00000463216 PURBQ96QR8 312 aaKnown RBP28.36■■■□□ 2.13
TTC3-212ENST00000463216 MROH7Q68CQ1 1323 aa28.36■■■□□ 2.13
TTC3-212ENST00000463216 A0A0U1RQG5 324 aaPredicted RBP28.35■■■□□ 2.13
TTC3-212ENST00000463216 NOVP48745 357 aa28.35■■■□□ 2.13
TTC3-212ENST00000463216 FBXO16Q8IX29 292 aaPredicted RBP28.35■■■□□ 2.13
TTC3-212ENST00000463216 PTGS1P23219 599 aa28.34■■■□□ 2.13
TTC3-212ENST00000463216 TLK2Q86UE8 772 aa28.34■■■□□ 2.13
TTC3-212ENST00000463216 AP5M1Q9H0R1 490 aa28.34■■■□□ 2.13
TTC3-212ENST00000463216 RANBP17Q9H2T7 1088 aaKnown RBP28.34■■■□□ 2.13
TTC3-212ENST00000463216 PDGFCQ9NRA1 345 aa28.34■■■□□ 2.13
TTC3-212ENST00000463216 ASTN1O14525 1302 aa28.34■■■□□ 2.13
TTC3-212ENST00000463216 ARVCFO00192 962 aa28.33■■■□□ 2.13
TTC3-212ENST00000463216 DYNC1LI2O43237 492 aaPredicted RBP28.33■■■□□ 2.13
TTC3-212ENST00000463216 TIMP1P01033 207 aa28.33■■■□□ 2.13
TTC3-212ENST00000463216 SDSP20132 328 aa28.33■■■□□ 2.13
TTC3-212ENST00000463216 MFAP1P55081 439 aaKnown RBP28.33■■■□□ 2.13
TTC3-212ENST00000463216 AAMPQ13685 434 aa28.33■■■□□ 2.13
TTC3-212ENST00000463216 AKNAD1Q5T1N1 836 aa28.33■■■□□ 2.13
TTC3-212ENST00000463216 CHD1LQ86WJ1 897 aa28.33■■■□□ 2.13
TTC3-212ENST00000463216 TCP11L1Q9NUJ3 509 aa28.33■■■□□ 2.13
TTC3-212ENST00000463216 TLR3O15455 904 aaKnown RBP28.32■■■□□ 2.12
TTC3-212ENST00000463216 IGHDP01880 384 aa28.32■■■□□ 2.12
TTC3-212ENST00000463216 SMAD3P84022 425 aaKnown RBP28.32■■■□□ 2.12
TTC3-212ENST00000463216 BAATQ14032 418 aaPredicted RBP28.32■■■□□ 2.12
TTC3-212ENST00000463216 CXCL17Q6UXB2 119 aa28.32■■■□□ 2.12
TTC3-212ENST00000463216 TICAM2Q86XR7 235 aa28.32■■■□□ 2.12
TTC3-212ENST00000463216 TBC1D10CQ8IV04 446 aa28.32■■■□□ 2.12
TTC3-212ENST00000463216 SMC5Q8IY18 1101 aa28.32■■■□□ 2.12
TTC3-212ENST00000463216 ZMYM6O95789 1325 aa28.32■■■□□ 2.12
TTC3-212ENST00000463216 PTPDC1A2A3K4 754 aa28.31■■■□□ 2.12
TTC3-212ENST00000463216 CTAGE5O15320 804 aa28.31■■■□□ 2.12
TTC3-212ENST00000463216 SMPD1P17405 629 aa28.31■■■□□ 2.12
TTC3-212ENST00000463216 CDK7P50613 346 aa28.31■■■□□ 2.12
TTC3-212ENST00000463216 CWC27Q6UX04 472 aaKnown RBP28.31■■■□□ 2.12
TTC3-212ENST00000463216 BTNL9Q6UXG8 535 aa28.31■■■□□ 2.12
TTC3-212ENST00000463216 PLEKHM2Q8IWE5 1019 aa28.31■■■□□ 2.12
TTC3-212ENST00000463216 ZKSCAN3Q9BRR0 538 aa28.31■■■□□ 2.12
TTC3-212ENST00000463216 PPP1R12CQ9BZL4 782 aa28.31■■■□□ 2.12
TTC3-212ENST00000463216 SEMA6BQ9H3T3 888 aa28.31■■■□□ 2.12
TTC3-212ENST00000463216 TBX21Q9UL17 535 aa28.31■■■□□ 2.12
TTC3-212ENST00000463216 GNEQ9Y223 722 aaKnown RBP28.31■■■□□ 2.12
TTC3-212ENST00000463216 NFIBO00712 420 aa28.3■■■□□ 2.12
TTC3-212ENST00000463216 PDHBP11177 359 aa28.3■■■□□ 2.12
TTC3-212ENST00000463216 FSCN1Q16658 493 aaKnown RBP28.3■■■□□ 2.12
TTC3-212ENST00000463216 KIAA1211Q6ZU35 1233 aa28.3■■■□□ 2.12
TTC3-212ENST00000463216 CDX2Q99626 313 aaPredicted RBP28.3■■■□□ 2.12
TTC3-212ENST00000463216 RNF41Q9H4P4 317 aaPredicted RBP28.3■■■□□ 2.12
TTC3-212ENST00000463216 DIAPH3Q9NSV4 1193 aa28.3■■■□□ 2.12
TTC3-212ENST00000463216 LCTP09848 1927 aa28.3■■■□□ 2.12
TTC3-212ENST00000463216 LRRC37A2A6NM11 1700 aa28.29■■■□□ 2.12
TTC3-212ENST00000463216 ZNF213O14771 459 aa28.29■■■□□ 2.12
TTC3-212ENST00000463216 ZEB2O60315 1214 aa28.29■■■□□ 2.12
TTC3-212ENST00000463216 IQSEC1Q6DN90 963 aa28.29■■■□□ 2.12
TTC3-212ENST00000463216 EXOC6Q8TAG9 804 aa28.29■■■□□ 2.12
TTC3-212ENST00000463216 ESR2Q92731 530 aa28.29■■■□□ 2.12
TTC3-212ENST00000463216 NEDD4P46934 1319 aa28.28■■■□□ 2.12
TTC3-212ENST00000463216 CALML3P27482 149 aa28.28■■■□□ 2.12
TTC3-212ENST00000463216 NUCB1Q02818 461 aa28.28■■■□□ 2.12
TTC3-212ENST00000463216 TMEM63BQ5T3F8 832 aa28.28■■■□□ 2.12
TTC3-212ENST00000463216 MFSD5Q6N075 450 aa28.28■■■□□ 2.12
TTC3-212ENST00000463216 TAPT1Q6NXT6 567 aa28.28■■■□□ 2.12
TTC3-212ENST00000463216 FAM126BQ8IXS8 530 aa28.28■■■□□ 2.12
TTC3-212ENST00000463216 TTC14Q96N46 770 aa28.28■■■□□ 2.12
TTC3-212ENST00000463216 ADD3Q9UEY8 706 aaKnown RBP28.28■■■□□ 2.12
TTC3-212ENST00000463216 PCP11498 1178 aaKnown RBP28.27■■■□□ 2.12
TTC3-212ENST00000463216 ALDH5A1P51649 535 aaPredicted RBP28.27■■■□□ 2.12
TTC3-212ENST00000463216 ZNF543Q08ER8 600 aa28.27■■■□□ 2.12
TTC3-212ENST00000463216 TTYH1Q9H313 450 aaPredicted RBP28.27■■■□□ 2.12
TTC3-212ENST00000463216 VTA1Q9NP79 307 aa28.27■■■□□ 2.12
TTC3-212ENST00000463216 A0A0C4DFX4 3053 aa28.26■■■□□ 2.11
TTC3-212ENST00000463216 GOLGA8HP0CJ92 632 aa28.26■■■□□ 2.11
TTC3-212ENST00000463216 CSF2RAP15509 400 aa28.26■■■□□ 2.11
TTC3-212ENST00000463216 PPIGQ13427 754 aaKnown RBP eCLIP28.26■■■□□ 2.117e-7■□□□□ 10
TTC3-212ENST00000463216 SLC30A10Q6XR72 485 aa28.26■■■□□ 2.11
TTC3-212ENST00000463216 TMEM199Q8N511 208 aa28.26■■■□□ 2.11
TTC3-212ENST00000463216 BUD13Q9BRD0 619 aaKnown RBP eCLIP28.26■■■□□ 2.112e-19■□□□□ 11.3
TTC3-212ENST00000463216 CABYRO75952 493 aa28.25■■■□□ 2.11
TTC3-212ENST00000463216 NKX3-2P78367 333 aa28.25■■■□□ 2.11
TTC3-212ENST00000463216 ITGA7Q13683 1181 aa28.25■■■□□ 2.11
TTC3-212ENST00000463216 RNF207Q6ZRF8 634 aa28.25■■■□□ 2.11
TTC3-212ENST00000463216 MYLIPQ8WY64 445 aa28.25■■■□□ 2.11
TTC3-212ENST00000463216 OSBPL3Q9H4L5 887 aa28.25■■■□□ 2.11
TTC3-212ENST00000463216 ACRP10323 421 aa28.24■■■□□ 2.11
TTC3-212ENST00000463216 CYP2C18P33260 490 aa28.24■■■□□ 2.11
TTC3-212ENST00000463216 PSMC6P62333 389 aa28.24■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms