RNA–Protein interactions for RNA: ENST00000463005.1

GARNL3-212, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 887 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-212ENST00000463005 PARP14Q460N5 1801 aa9.63□□□□□ -0.87
GARNL3-212ENST00000463005 LAMA2P24043 3122 aaKnown RBP9.62□□□□□ -0.87
GARNL3-212ENST00000463005 A0A1W2PRG0 241 aa9.62□□□□□ -0.87
GARNL3-212ENST00000463005 MPHOSPH10O00566 681 aaKnown RBP9.62□□□□□ -0.87
GARNL3-212ENST00000463005 ITGB8P26012 769 aa9.62□□□□□ -0.87
GARNL3-212ENST00000463005 EPHB4P54760 987 aa9.62□□□□□ -0.87
GARNL3-212ENST00000463005 AKNAD1Q5T1N1 836 aa9.62□□□□□ -0.87
GARNL3-212ENST00000463005 TMEM179Q6ZVK1 233 aa9.62□□□□□ -0.87
GARNL3-212ENST00000463005 ANKRD33Q7Z3H0 272 aa9.62□□□□□ -0.87
GARNL3-212ENST00000463005 SLC44A5Q8NCS7 719 aa9.62□□□□□ -0.87
GARNL3-212ENST00000463005 NUP133Q8WUM0 1156 aa9.62□□□□□ -0.87
GARNL3-212ENST00000463005 ZNF516Q92618 1163 aa9.62□□□□□ -0.87
GARNL3-212ENST00000463005 GAS2L1Q99501 681 aaPredicted RBP9.62□□□□□ -0.87
GARNL3-212ENST00000463005 TINF2Q9BSI4 451 aa9.62□□□□□ -0.87
GARNL3-212ENST00000463005 SH2D4AQ9H788 454 aa9.62□□□□□ -0.87
GARNL3-212ENST00000463005 ARHGEF10LQ9HCE6 1279 aa9.62□□□□□ -0.87
GARNL3-212ENST00000463005 NOP58Q9Y2X3 529 aaKnown RBP9.62□□□□□ -0.87
GARNL3-212ENST00000463005 A0A1W2PQ45 241 aaPredicted RBP9.61□□□□□ -0.87
GARNL3-212ENST00000463005 A0A1W2PQY0 241 aa9.61□□□□□ -0.87
GARNL3-212ENST00000463005 PQBP1O60828 265 aaKnown RBP9.61□□□□□ -0.87
GARNL3-212ENST00000463005 FLOT1O75955 427 aa9.61□□□□□ -0.87
GARNL3-212ENST00000463005 TIMP1P01033 207 aa9.61□□□□□ -0.87
GARNL3-212ENST00000463005 AKR1A1P14550 325 aa9.61□□□□□ -0.87
GARNL3-212ENST00000463005 JUNDP17535 347 aa9.61□□□□□ -0.87
GARNL3-212ENST00000463005 COPB2P35606 906 aa9.61□□□□□ -0.87
GARNL3-212ENST00000463005 FAAP100Q0VG06 881 aa9.61□□□□□ -0.87
GARNL3-212ENST00000463005 TTF1Q15361 905 aaPredicted RBP9.61□□□□□ -0.87
GARNL3-212ENST00000463005 MFSD5Q6N075 450 aa9.61□□□□□ -0.87
GARNL3-212ENST00000463005 RIOX2Q8IUF8 465 aa9.61□□□□□ -0.87
GARNL3-212ENST00000463005 MSL3Q8N5Y2 521 aaKnown RBP9.61□□□□□ -0.87
GARNL3-212ENST00000463005 TIFAQ96CG3 184 aa9.61□□□□□ -0.87
GARNL3-212ENST00000463005 MMP19Q99542 508 aa9.61□□□□□ -0.87
GARNL3-212ENST00000463005 SPSB2Q99619 263 aa9.61□□□□□ -0.87
GARNL3-212ENST00000463005 MTRQ99707 1265 aa9.61□□□□□ -0.87
GARNL3-212ENST00000463005 RIOK1Q9BRS2 568 aaKnown RBP9.61□□□□□ -0.87
GARNL3-212ENST00000463005 CRNKL1Q9BZJ0 848 aaKnown RBP9.61□□□□□ -0.87
GARNL3-212ENST00000463005 CCDC8Q9H0W5 538 aaPredicted RBP9.61□□□□□ -0.87
GARNL3-212ENST00000463005 SWAP70Q9UH65 585 aa9.61□□□□□ -0.87
GARNL3-212ENST00000463005 DBNLQ9UJU6 430 aaKnown RBP9.61□□□□□ -0.87
GARNL3-212ENST00000463005 ADAMTS5Q9UNA0 930 aa9.61□□□□□ -0.87
GARNL3-212ENST00000463005 TMX2Q9Y320 296 aa9.61□□□□□ -0.87
GARNL3-212ENST00000463005 NAV1Q8NEY1 1877 aa9.61□□□□□ -0.87
GARNL3-212ENST00000463005 MROH7Q68CQ1 1323 aa9.6□□□□□ -0.87
GARNL3-212ENST00000463005 TTC28Q96AY4 2481 aa9.6□□□□□ -0.87
GARNL3-212ENST00000463005 MAGEB6P1A0A0J9YX57 407 aa9.6□□□□□ -0.87
GARNL3-212ENST00000463005 WDR46O15213 610 aaKnown RBP9.6□□□□□ -0.87
GARNL3-212ENST00000463005 PGK1P00558 417 aa9.6□□□□□ -0.87
GARNL3-212ENST00000463005 ZNF865P0CJ78 1059 aaPredicted RBP9.6□□□□□ -0.87
GARNL3-212ENST00000463005 TRIM27P14373 513 aa9.6□□□□□ -0.87
GARNL3-212ENST00000463005 PPIGQ13427 754 aaKnown RBP eCLIP9.6□□□□□ -0.87
GARNL3-212ENST00000463005 KCTD2Q14681 263 aa9.6□□□□□ -0.87
GARNL3-212ENST00000463005 ZNF792Q3KQV3 632 aa9.6□□□□□ -0.87
GARNL3-212ENST00000463005 DESI1Q6ICB0 168 aa9.6□□□□□ -0.87
GARNL3-212ENST00000463005 USP38Q8NB14 1042 aa9.6□□□□□ -0.87
GARNL3-212ENST00000463005 EAF2Q96CJ1 260 aaPredicted RBP9.6□□□□□ -0.87
GARNL3-212ENST00000463005 ATG4CQ96DT6 458 aa9.6□□□□□ -0.87
GARNL3-212ENST00000463005 CCDC17Q96LX7 622 aa9.6□□□□□ -0.87
GARNL3-212ENST00000463005 ASB2Q96Q27 587 aa9.6□□□□□ -0.87
GARNL3-212ENST00000463005 VCPKMTQ9H867 229 aa9.6□□□□□ -0.87
GARNL3-212ENST00000463005 STARD7Q9NQZ5 370 aa9.6□□□□□ -0.87
GARNL3-212ENST00000463005 MCM9Q9NXL9 1143 aa9.6□□□□□ -0.87
GARNL3-212ENST00000463005 CNPY2Q9Y2B0 182 aa9.6□□□□□ -0.87
GARNL3-212ENST00000463005 ROBO3Q96MS0 1386 aa9.6□□□□□ -0.87
GARNL3-212ENST00000463005 ELP1O95163 1332 aa9.59□□□□□ -0.87
GARNL3-212ENST00000463005 PRUNE2Q8WUY3 3088 aa9.59□□□□□ -0.87
GARNL3-212ENST00000463005 NCOR1O75376 2440 aa9.59□□□□□ -0.87
GARNL3-212ENST00000463005 ADAMTS4O75173 837 aa9.59□□□□□ -0.87
GARNL3-212ENST00000463005 F12P00748 615 aaPredicted RBP9.59□□□□□ -0.87
GARNL3-212ENST00000463005 CTHP32929 405 aa9.59□□□□□ -0.87
GARNL3-212ENST00000463005 STAT3P40763 770 aa9.59□□□□□ -0.87
GARNL3-212ENST00000463005 ACLYP53396 1101 aa9.59□□□□□ -0.87
GARNL3-212ENST00000463005 MRPS5P82675 430 aaKnown RBP9.59□□□□□ -0.87
GARNL3-212ENST00000463005 TMEM132BQ14DG7 1078 aa9.59□□□□□ -0.87
GARNL3-212ENST00000463005 SIAH1Q8IUQ4 282 aa9.59□□□□□ -0.87
GARNL3-212ENST00000463005 ITPRIPQ8IWB1 547 aa9.59□□□□□ -0.87
GARNL3-212ENST00000463005 TMEM199Q8N511 208 aa9.59□□□□□ -0.87
GARNL3-212ENST00000463005 PCSK9Q8NBP7 692 aaKnown RBP9.59□□□□□ -0.87
GARNL3-212ENST00000463005 KLHDC9Q8NEP7 349 aa9.59□□□□□ -0.87
GARNL3-212ENST00000463005 GLT1D1Q96MS3 346 aa9.59□□□□□ -0.87
GARNL3-212ENST00000463005 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.59□□□□□ -0.87
GARNL3-212ENST00000463005 CHMP4BQ9H444 224 aaKnown RBP9.59□□□□□ -0.87
GARNL3-212ENST00000463005 ANTXR1Q9H6X2 564 aa9.59□□□□□ -0.87
GARNL3-212ENST00000463005 THEGQ9P2T0 379 aa9.59□□□□□ -0.87
GARNL3-212ENST00000463005 FAM184BQ9ULE4 1060 aa9.59□□□□□ -0.87
GARNL3-212ENST00000463005 TCF20Q9UGU0 1960 aaKnown RBP9.58□□□□□ -0.88
GARNL3-212ENST00000463005 DUSP11O75319 330 aaKnown RBP9.58□□□□□ -0.88
GARNL3-212ENST00000463005 CDK7P50613 346 aa9.58□□□□□ -0.88
GARNL3-212ENST00000463005 IRX6P78412 446 aaPredicted RBP9.58□□□□□ -0.88
GARNL3-212ENST00000463005 RAB30Q15771 203 aa9.58□□□□□ -0.88
GARNL3-212ENST00000463005 KCNA10Q16322 511 aa9.58□□□□□ -0.88
GARNL3-212ENST00000463005 KIAA1755Q5JYT7 1200 aa9.58□□□□□ -0.88
GARNL3-212ENST00000463005 TMEM240Q5SV17 173 aa9.58□□□□□ -0.88
GARNL3-212ENST00000463005 RASIP1Q5U651 963 aa9.58□□□□□ -0.88
GARNL3-212ENST00000463005 CCDC129Q6ZRS4 1044 aa9.58□□□□□ -0.88
GARNL3-212ENST00000463005 PBX4Q9BYU1 374 aa9.58□□□□□ -0.88
GARNL3-212ENST00000463005 SPC25Q9HBM1 224 aa9.58□□□□□ -0.88
GARNL3-212ENST00000463005 DCP1AQ9NPI6 582 aaPredicted RBP9.58□□□□□ -0.88
GARNL3-212ENST00000463005 MSRAQ9UJ68 235 aa9.58□□□□□ -0.88
GARNL3-212ENST00000463005 TBX21Q9UL17 535 aa9.58□□□□□ -0.88
GARNL3-212ENST00000463005 BAZ2AQ9UIF9 1905 aaKnown RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms