RNA–Protein interactions for RNA: ENST00000462392.5

IMP4-210, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 3

Gene IMP4, Length 1,793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-210ENST00000462392 USP17L13C9JLJ4 530 aa23.32■■□□□ 1.32
IMP4-210ENST00000462392 USP17L11C9JVI0 530 aa23.32■■□□□ 1.32
IMP4-210ENST00000462392 USP17L18D6R9N7 530 aa23.32■■□□□ 1.32
IMP4-210ENST00000462392 USP17L22D6RA61 530 aa23.32■■□□□ 1.32
IMP4-210ENST00000462392 USP17L17D6RBQ6 530 aa23.32■■□□□ 1.32
IMP4-210ENST00000462392 USP17L19D6RCP7 530 aa23.32■■□□□ 1.32
IMP4-210ENST00000462392 USP17L20D6RJB6 530 aa23.32■■□□□ 1.32
IMP4-210ENST00000462392 PTPRAP18433 802 aa23.32■■□□□ 1.32
IMP4-210ENST00000462392 USP17L24Q0WX57 530 aa23.32■■□□□ 1.32
IMP4-210ENST00000462392 MTMR2Q13614 643 aa23.32■■□□□ 1.32
IMP4-210ENST00000462392 LONRF3Q496Y0 759 aa23.32■■□□□ 1.32
IMP4-210ENST00000462392 USP17L6PQ6QN14 398 aa23.32■■□□□ 1.32
IMP4-210ENST00000462392 DLK2Q6UY11 383 aa23.32■■□□□ 1.32
IMP4-210ENST00000462392 SULF1Q8IWU6 871 aa23.32■■□□□ 1.32
IMP4-210ENST00000462392 EPSTI1Q96J88 318 aa23.32■■□□□ 1.32
IMP4-210ENST00000462392 RANBP17Q9H2T7 1088 aaKnown RBP23.32■■□□□ 1.32
IMP4-210ENST00000462392 WDR46O15213 610 aaKnown RBP23.32■■□□□ 1.32
IMP4-210ENST00000462392 TAL1P17542 331 aaPredicted RBP23.32■■□□□ 1.32
IMP4-210ENST00000462392 SPP2Q13103 211 aa23.32■■□□□ 1.32
IMP4-210ENST00000462392 DGKZQ13574 1117 aa23.32■■□□□ 1.32
IMP4-210ENST00000462392 SYMPKQ92797 1274 aaKnown RBP23.32■■□□□ 1.32
IMP4-210ENST00000462392 WDR18Q9BV38 432 aa23.32■■□□□ 1.32
IMP4-210ENST00000462392 POLR2AP24928 1970 aaKnown RBP23.32■■□□□ 1.32
IMP4-210ENST00000462392 ADM5C9JUS6 153 aa23.31■■□□□ 1.32
IMP4-210ENST00000462392 LAD1O00515 517 aa23.31■■□□□ 1.32
IMP4-210ENST00000462392 POLR2DO15514 142 aaKnown RBP23.31■■□□□ 1.32
IMP4-210ENST00000462392 GRIN3BO60391 1043 aa23.31■■□□□ 1.32
IMP4-210ENST00000462392 PRKG1Q13976 671 aa23.31■■□□□ 1.32
IMP4-210ENST00000462392 SAMD1Q6SPF0 538 aaPredicted RBP23.31■■□□□ 1.32
IMP4-210ENST00000462392 KRBA2Q6ZNG9 492 aa23.31■■□□□ 1.32
IMP4-210ENST00000462392 AS3MTQ9HBK9 375 aa23.31■■□□□ 1.32
IMP4-210ENST00000462392 MEIS2O14770 477 aa23.3■■□□□ 1.32
IMP4-210ENST00000462392 CCDC174Q6PII3 467 aa23.3■■□□□ 1.32
IMP4-210ENST00000462392 CNNM3Q8NE01 707 aa23.3■■□□□ 1.32
IMP4-210ENST00000462392 EMILIN3Q9NT22 766 aa23.3■■□□□ 1.32
IMP4-210ENST00000462392 ZC3H4Q9UPT8 1303 aaKnown RBP23.3■■□□□ 1.32
IMP4-210ENST00000462392 EDIL3O43854 480 aa23.29■■□□□ 1.32
IMP4-210ENST00000462392 NEMFO60524 1076 aa23.29■■□□□ 1.32
IMP4-210ENST00000462392 EPHX2P34913 555 aa23.29■■□□□ 1.32
IMP4-210ENST00000462392 USP14P54578 494 aa23.29■■□□□ 1.32
IMP4-210ENST00000462392 TRAF1Q13077 416 aa23.29■■□□□ 1.32
IMP4-210ENST00000462392 ORC2Q13416 577 aaPredicted RBP23.29■■□□□ 1.32
IMP4-210ENST00000462392 DTHD1Q6ZMT9 781 aa23.29■■□□□ 1.32
IMP4-210ENST00000462392 USP50Q70EL3 339 aaPredicted RBP23.29■■□□□ 1.32
IMP4-210ENST00000462392 PDILTQ8N807 584 aa23.29■■□□□ 1.32
IMP4-210ENST00000462392 ZNF280CQ8ND82 737 aa23.29■■□□□ 1.32
IMP4-210ENST00000462392 KIAA1468Q9P260 1216 aa23.29■■□□□ 1.32
IMP4-210ENST00000462392 GLTPD2A6NH11 291 aa23.29■■□□□ 1.32
IMP4-210ENST00000462392 USP2O75604 605 aaPredicted RBP23.29■■□□□ 1.32
IMP4-210ENST00000462392 LONP1P36776 959 aaKnown RBP23.29■■□□□ 1.32
IMP4-210ENST00000462392 PRPHP41219 470 aa23.29■■□□□ 1.32
IMP4-210ENST00000462392 BACE1P56817 501 aa23.29■■□□□ 1.32
IMP4-210ENST00000462392 ANO6Q4KMQ2 910 aa23.29■■□□□ 1.32
IMP4-210ENST00000462392 KRT26Q7Z3Y9 468 aa23.29■■□□□ 1.32
IMP4-210ENST00000462392 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.29■■□□□ 1.322e-6■□□□□ 8.3
IMP4-210ENST00000462392 ZHX2Q9Y6X8 837 aa23.29■■□□□ 1.32
IMP4-210ENST00000462392 OPLAHO14841 1288 aa23.28■■□□□ 1.32
IMP4-210ENST00000462392 OR52Z1P0C646 297 aa23.28■■□□□ 1.32
IMP4-210ENST00000462392 VCAM1P19320 739 aa23.28■■□□□ 1.32
IMP4-210ENST00000462392 NOL9Q5SY16 702 aaKnown RBP23.28■■□□□ 1.32
IMP4-210ENST00000462392 SLF1Q9BQI6 1058 aa23.28■■□□□ 1.32
IMP4-210ENST00000462392 A0A087X0B3 334 aa23.27■■□□□ 1.32
IMP4-210ENST00000462392 AP3B2Q13367 1082 aa23.27■■□□□ 1.32
IMP4-210ENST00000462392 PRPF38AQ8NAV1 312 aaKnown RBP23.27■■□□□ 1.32
IMP4-210ENST00000462392 ANO3Q9BYT9 981 aa23.27■■□□□ 1.32
IMP4-210ENST00000462392 SERTAD1Q9UHV2 236 aa23.27■■□□□ 1.32
IMP4-210ENST00000462392 TDP2O95551 362 aa23.27■■□□□ 1.32
IMP4-210ENST00000462392 POTEDQ86YR6 584 aa23.27■■□□□ 1.32
IMP4-210ENST00000462392 TANGO6Q9C0B7 1094 aa23.27■■□□□ 1.32
IMP4-210ENST00000462392 ACTN4O43707 911 aaKnown RBP23.26■■□□□ 1.31
IMP4-210ENST00000462392 STX1AQ16623 288 aa23.26■■□□□ 1.31
IMP4-210ENST00000462392 MCTP2Q6DN12 878 aa23.26■■□□□ 1.31
IMP4-210ENST00000462392 PPP4R3AQ6IN85 833 aa23.26■■□□□ 1.31
IMP4-210ENST00000462392 ELOA2Q8IYF1 753 aaPredicted RBP23.26■■□□□ 1.31
IMP4-210ENST00000462392 FAM200AQ8TCP9 573 aa23.26■■□□□ 1.31
IMP4-210ENST00000462392 ZC3H15Q8WU90 426 aaKnown RBP23.26■■□□□ 1.31
IMP4-210ENST00000462392 P2RX7Q99572 595 aaKnown RBP23.26■■□□□ 1.31
IMP4-210ENST00000462392 DNAJC25Q9H1X3 360 aa23.26■■□□□ 1.31
IMP4-210ENST00000462392 A0A087WWV3 80 aa23.25■■□□□ 1.31
IMP4-210ENST00000462392 SLC37A4O43826 429 aa23.25■■□□□ 1.31
IMP4-210ENST00000462392 PNOCQ13519 176 aa23.25■■□□□ 1.31
IMP4-210ENST00000462392 DHX58Q96C10 678 aa23.25■■□□□ 1.31
IMP4-210ENST00000462392 RPAP3Q9H6T3 665 aaPredicted RBP23.25■■□□□ 1.31
IMP4-210ENST00000462392 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.24■■□□□ 1.31
IMP4-210ENST00000462392 LDHDQ86WU2 507 aa23.24■■□□□ 1.31
IMP4-210ENST00000462392 FOXN1O15353 648 aa23.24■■□□□ 1.31
IMP4-210ENST00000462392 PPP1R12BO60237 982 aaPredicted RBP23.24■■□□□ 1.31
IMP4-210ENST00000462392 FLOT1O75955 427 aa23.24■■□□□ 1.31
IMP4-210ENST00000462392 FOSP01100 380 aaPredicted RBP23.24■■□□□ 1.31
IMP4-210ENST00000462392 CDC25AP30304 524 aa23.24■■□□□ 1.31
IMP4-210ENST00000462392 HOXA13P31271 388 aaPredicted RBP23.24■■□□□ 1.31
IMP4-210ENST00000462392 HMGCS2P54868 508 aa23.24■■□□□ 1.31
IMP4-210ENST00000462392 MAP3K9P80192 1104 aa23.24■■□□□ 1.31
IMP4-210ENST00000462392 MDM2Q00987 491 aaPredicted RBP23.24■■□□□ 1.31
IMP4-210ENST00000462392 CALCRLQ16602 461 aa23.24■■□□□ 1.31
IMP4-210ENST00000462392 UVSSAQ2YD98 709 aa23.24■■□□□ 1.31
IMP4-210ENST00000462392 ANP32BQ92688 251 aaKnown RBP23.24■■□□□ 1.31
IMP4-210ENST00000462392 MTMR9Q96QG7 549 aa23.24■■□□□ 1.31
IMP4-210ENST00000462392 ANO10Q9NW15 660 aa23.24■■□□□ 1.31
IMP4-210ENST00000462392 HOOK1Q9UJC3 728 aaKnown RBP23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms