RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 TIMP1P01033 207 aa21.07■□□□□ 0.96
SSB-206ENST00000461708 TNFAIP2Q03169 654 aa21.07■□□□□ 0.96
SSB-206ENST00000461708 FPGSQ05932 587 aa21.07■□□□□ 0.96
SSB-206ENST00000461708 NMIQ13287 307 aaPredicted RBP21.07■□□□□ 0.96
SSB-206ENST00000461708 CCDC96Q2M329 555 aa21.07■□□□□ 0.96
SSB-206ENST00000461708 CCDC174Q6PII3 467 aa21.07■□□□□ 0.96
SSB-206ENST00000461708 MORC4Q8TE76 937 aa21.07■□□□□ 0.96
SSB-206ENST00000461708 TMEM47Q9BQJ4 181 aa21.07■□□□□ 0.96
SSB-206ENST00000461708 SEZ6LQ9BYH1 1024 aa21.07■□□□□ 0.96
SSB-206ENST00000461708 LNPKQ9C0E8 428 aa21.07■□□□□ 0.96
SSB-206ENST00000461708 CCPG1Q9ULG6 757 aa21.07■□□□□ 0.96
SSB-206ENST00000461708 GNEQ9Y223 722 aaKnown RBP21.07■□□□□ 0.96
SSB-206ENST00000461708 Q9Y3F1 56 aa21.07■□□□□ 0.96
SSB-206ENST00000461708 A0A0U1RQG5 324 aaPredicted RBP21.06■□□□□ 0.96
SSB-206ENST00000461708 ARVCFO00192 962 aa21.06■□□□□ 0.96
SSB-206ENST00000461708 CABYRO75952 493 aa21.06■□□□□ 0.96
SSB-206ENST00000461708 MUM1L1Q5H9M0 696 aa21.06■□□□□ 0.96
SSB-206ENST00000461708 AKNAD1Q5T1N1 836 aa21.06■□□□□ 0.96
SSB-206ENST00000461708 IQSEC1Q6DN90 963 aa21.06■□□□□ 0.96
SSB-206ENST00000461708 ZNF589Q86UQ0 364 aaPredicted RBP21.06■□□□□ 0.96
SSB-206ENST00000461708 TOMM22Q9NS69 142 aa21.06■□□□□ 0.96
SSB-206ENST00000461708 ASTN1O14525 1302 aa21.05■□□□□ 0.96
SSB-206ENST00000461708 UNC80Q8N2C7 3258 aa21.05■□□□□ 0.96
SSB-206ENST00000461708 LRRC37A2A6NM11 1700 aa21.05■□□□□ 0.96
SSB-206ENST00000461708 TMEM265A0A087WTH1 108 aa21.05■□□□□ 0.96
SSB-206ENST00000461708 TRIM6-TRIM34B2RNG4 842 aa21.05■□□□□ 0.96
SSB-206ENST00000461708 EPHB4P54760 987 aa21.05■□□□□ 0.96
SSB-206ENST00000461708 SYDE2Q5VT97 1194 aa21.05■□□□□ 0.96
SSB-206ENST00000461708 MFSD6Q6ZSS7 791 aa21.05■□□□□ 0.96
SSB-206ENST00000461708 RASGRP2Q7LDG7 609 aa21.05■□□□□ 0.96
SSB-206ENST00000461708 CHMP4CQ96CF2 233 aa21.05■□□□□ 0.96
SSB-206ENST00000461708 RNF41Q9H4P4 317 aaPredicted RBP21.05■□□□□ 0.96
SSB-206ENST00000461708 VTA1Q9NP79 307 aa21.05■□□□□ 0.96
SSB-206ENST00000461708 LCTP09848 1927 aa21.04■□□□□ 0.96
SSB-206ENST00000461708 SNAP25P60880 206 aa21.04■□□□□ 0.96
SSB-206ENST00000461708 IRX5P78411 483 aaPredicted RBP21.04■□□□□ 0.96
SSB-206ENST00000461708 RRP12Q5JTH9 1297 aaKnown RBP21.04■□□□□ 0.96
SSB-206ENST00000461708 MFSD5Q6N075 450 aa21.04■□□□□ 0.96
SSB-206ENST00000461708 CHD1LQ86WJ1 897 aa21.04■□□□□ 0.96
SSB-206ENST00000461708 RNPC3Q96LT9 517 aaKnown RBP21.04■□□□□ 0.96
SSB-206ENST00000461708 SEMA6BQ9H3T3 888 aa21.04■□□□□ 0.96
SSB-206ENST00000461708 ADD3Q9UEY8 706 aaKnown RBP21.04■□□□□ 0.96
SSB-206ENST00000461708 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.03■□□□□ 0.96
SSB-206ENST00000461708 DLL1O00548 723 aa21.03■□□□□ 0.96
SSB-206ENST00000461708 SNHG28P0DPA3 235 aa21.03■□□□□ 0.96
SSB-206ENST00000461708 PDHBP11177 359 aa21.03■□□□□ 0.96
SSB-206ENST00000461708 SDSP20132 328 aa21.03■□□□□ 0.96
SSB-206ENST00000461708 NUCB1Q02818 461 aa21.03■□□□□ 0.96
SSB-206ENST00000461708 TTBK2Q6IQ55 1244 aa21.03■□□□□ 0.96
SSB-206ENST00000461708 TAPT1Q6NXT6 567 aa21.03■□□□□ 0.96
SSB-206ENST00000461708 NSMFQ6X4W1 530 aa21.03■□□□□ 0.96
SSB-206ENST00000461708 TLK2Q86UE8 772 aa21.03■□□□□ 0.96
SSB-206ENST00000461708 PLEKHM2Q8IWE5 1019 aa21.03■□□□□ 0.96
SSB-206ENST00000461708 FAM126BQ8IXS8 530 aa21.03■□□□□ 0.96
SSB-206ENST00000461708 SLC43A3Q8NBI5 491 aa21.03■□□□□ 0.96
SSB-206ENST00000461708 RILPL2Q969X0 211 aa21.03■□□□□ 0.96
SSB-206ENST00000461708 VTI1AQ96AJ9 217 aa21.03■□□□□ 0.96
SSB-206ENST00000461708 AP5M1Q9H0R1 490 aa21.03■□□□□ 0.96
SSB-206ENST00000461708 TLR3O15455 904 aaKnown RBP21.02■□□□□ 0.96
SSB-206ENST00000461708 ZEB2O60315 1214 aa21.02■□□□□ 0.96
SSB-206ENST00000461708 SMPD1P17405 629 aa21.02■□□□□ 0.96
SSB-206ENST00000461708 SLC16A2P36021 539 aa21.02■□□□□ 0.96
SSB-206ENST00000461708 HAND2P61296 217 aa21.02■□□□□ 0.96
SSB-206ENST00000461708 ZNF543Q08ER8 600 aa21.02■□□□□ 0.96
SSB-206ENST00000461708 FSCN1Q16658 493 aaKnown RBP21.02■□□□□ 0.96
SSB-206ENST00000461708 NOL8Q76FK4 1167 aaKnown RBP21.02■□□□□ 0.96
SSB-206ENST00000461708 MTMR7Q9Y216 660 aa21.02■□□□□ 0.96
SSB-206ENST00000461708 WDR19Q8NEZ3 1342 aa21.02■□□□□ 0.95
SSB-206ENST00000461708 CD4P01730 458 aa21.01■□□□□ 0.95
SSB-206ENST00000461708 PPIGQ13427 754 aaKnown RBP eCLIP21.01■□□□□ 0.95
SSB-206ENST00000461708 BAATQ14032 418 aaPredicted RBP21.01■□□□□ 0.95
SSB-206ENST00000461708 DGKHQ86XP1 1220 aa21.01■□□□□ 0.95
SSB-206ENST00000461708 ESR2Q92731 530 aa21.01■□□□□ 0.95
SSB-206ENST00000461708 MAF1Q9H063 256 aa21.01■□□□□ 0.95
SSB-206ENST00000461708 LAMA4Q16363 1823 aa21■□□□□ 0.95
SSB-206ENST00000461708 HIP1O00291 1037 aa21■□□□□ 0.95
SSB-206ENST00000461708 BEX3Q00994 111 aa21■□□□□ 0.95
SSB-206ENST00000461708 CCDC178Q5BJE1 867 aa21■□□□□ 0.95
SSB-206ENST00000461708 GPATCH4Q5T3I0 446 aaKnown RBP21■□□□□ 0.95
SSB-206ENST00000461708 B4GALNT3Q6L9W6 998 aa21■□□□□ 0.95
SSB-206ENST00000461708 TBC1D10CQ8IV04 446 aa21■□□□□ 0.95
SSB-206ENST00000461708 TMEM199Q8N511 208 aa21■□□□□ 0.95
SSB-206ENST00000461708 FAM161BQ96MY7 647 aa21■□□□□ 0.95
SSB-206ENST00000461708 CDX2Q99626 313 aaPredicted RBP21■□□□□ 0.95
SSB-206ENST00000461708 GPCPD1Q9NPB8 672 aa21■□□□□ 0.95
SSB-206ENST00000461708 PDGFCQ9NRA1 345 aa21■□□□□ 0.95
SSB-206ENST00000461708 FRMPD2Q68DX3 1309 aaPredicted RBP21■□□□□ 0.95
SSB-206ENST00000461708 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.99■□□□□ 0.95
SSB-206ENST00000461708 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.99■□□□□ 0.95
SSB-206ENST00000461708 NFIBO00712 420 aa20.99■□□□□ 0.95
SSB-206ENST00000461708 ZNF213O14771 459 aa20.99■□□□□ 0.95
SSB-206ENST00000461708 DYNC1LI2O43237 492 aaPredicted RBP20.99■□□□□ 0.95
SSB-206ENST00000461708 ALDH5A1P51649 535 aaPredicted RBP20.99■□□□□ 0.95
SSB-206ENST00000461708 DUSP28Q4G0W2 176 aa20.99■□□□□ 0.95
SSB-206ENST00000461708 CXCL17Q6UXB2 119 aa20.99■□□□□ 0.95
SSB-206ENST00000461708 FBXO16Q8IX29 292 aaPredicted RBP20.99■□□□□ 0.95
SSB-206ENST00000461708 CLEC4DQ8WXI8 215 aa20.99■□□□□ 0.95
SSB-206ENST00000461708 TTYH1Q9H313 450 aaPredicted RBP20.99■□□□□ 0.95
SSB-206ENST00000461708 PRUNE2Q8WUY3 3088 aa20.98■□□□□ 0.95
SSB-206ENST00000461708 RBM47A0AV96 593 aaKnown RBP20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms