RNA–Protein interactions for RNA: ENST00000461578.1

PABPC4-208, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 193 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-208ENST00000461578 HMMRO75330 724 aa16.42■□□□□ 0.22
PABPC4-208ENST00000461578 ATP2A2P16615 1042 aaKnown RBP16.42■□□□□ 0.22
PABPC4-208ENST00000461578 SMPD1P17405 629 aa16.42■□□□□ 0.22
PABPC4-208ENST00000461578 AAK1Q2M2I8 961 aa16.42■□□□□ 0.22
PABPC4-208ENST00000461578 SBK1Q52WX2 424 aa16.42■□□□□ 0.22
PABPC4-208ENST00000461578 TMEM63BQ5T3F8 832 aa16.42■□□□□ 0.22
PABPC4-208ENST00000461578 SIRT2Q8IXJ6 389 aa16.42■□□□□ 0.22
PABPC4-208ENST00000461578 RPUSD2Q8IZ73 545 aaKnown RBP16.42■□□□□ 0.22
PABPC4-208ENST00000461578 FAM133AQ8N9E0 248 aa16.42■□□□□ 0.22
PABPC4-208ENST00000461578 CEP95Q96GE4 821 aa16.42■□□□□ 0.22
PABPC4-208ENST00000461578 AGBL1Q96MI9 1066 aa16.42■□□□□ 0.22
PABPC4-208ENST00000461578 STRBPQ96SI9 672 aaKnown RBP16.42■□□□□ 0.22
PABPC4-208ENST00000461578 A1CFQ9NQ94 594 aaKnown RBP16.42■□□□□ 0.22
PABPC4-208ENST00000461578 PDGFCQ9NRA1 345 aa16.42■□□□□ 0.22
PABPC4-208ENST00000461578 RNF146Q9NTX7 359 aa16.42■□□□□ 0.22
PABPC4-208ENST00000461578 COG6Q9Y2V7 657 aa16.42■□□□□ 0.22
PABPC4-208ENST00000461578 ASB14A6NK59 587 aa16.41■□□□□ 0.22
PABPC4-208ENST00000461578 TMEM232C9JQI7 657 aa16.41■□□□□ 0.22
PABPC4-208ENST00000461578 RAB11FIP3O75154 756 aa16.41■□□□□ 0.22
PABPC4-208ENST00000461578 CA3P07451 260 aa16.41■□□□□ 0.22
PABPC4-208ENST00000461578 OAZ1P54368 228 aa16.41■□□□□ 0.22
PABPC4-208ENST00000461578 IKQ13123 557 aaPredicted RBP16.41■□□□□ 0.22
PABPC4-208ENST00000461578 TTLL4Q14679 1199 aa16.41■□□□□ 0.22
PABPC4-208ENST00000461578 SLFN13Q68D06 897 aa16.41■□□□□ 0.22
PABPC4-208ENST00000461578 KRT40Q6A162 431 aa16.41■□□□□ 0.22
PABPC4-208ENST00000461578 DEFB128Q7Z7B8 93 aa16.41■□□□□ 0.22
PABPC4-208ENST00000461578 FBXO16Q8IX29 292 aaPredicted RBP16.41■□□□□ 0.22
PABPC4-208ENST00000461578 ZNF444Q8N0Y2 327 aaPredicted RBP16.41■□□□□ 0.22
PABPC4-208ENST00000461578 VWCEQ96DN2 955 aa16.41■□□□□ 0.22
PABPC4-208ENST00000461578 XIRP2A4UGR9 3374 aa16.41■□□□□ 0.22
PABPC4-208ENST00000461578 GTPBP6O43824 516 aaPredicted RBP16.4■□□□□ 0.22
PABPC4-208ENST00000461578 CYP2C9P11712 490 aa16.4■□□□□ 0.22
PABPC4-208ENST00000461578 BMP3P12645 472 aa16.4■□□□□ 0.22
PABPC4-208ENST00000461578 ALAS1P13196 640 aa16.4■□□□□ 0.22
PABPC4-208ENST00000461578 SNAP25P60880 206 aa16.4■□□□□ 0.22
PABPC4-208ENST00000461578 TMEM67Q5HYA8 995 aa16.4■□□□□ 0.22
PABPC4-208ENST00000461578 RPAP2Q8IXW5 612 aaPredicted RBP16.4■□□□□ 0.22
PABPC4-208ENST00000461578 EPHX3Q9H6B9 360 aa16.4■□□□□ 0.22
PABPC4-208ENST00000461578 TRMT13Q9NUP7 481 aaKnown RBP16.4■□□□□ 0.22
PABPC4-208ENST00000461578 MTMR4Q9NYA4 1195 aa16.4■□□□□ 0.22
PABPC4-208ENST00000461578 MTCH2Q9Y6C9 303 aa16.4■□□□□ 0.22
PABPC4-208ENST00000461578 PRRC2BQ5JSZ5 2229 aaKnown RBP16.39■□□□□ 0.22
PABPC4-208ENST00000461578 EPOPA6NHQ4 379 aa16.39■□□□□ 0.21
PABPC4-208ENST00000461578 ERC2O15083 957 aa16.39■□□□□ 0.21
PABPC4-208ENST00000461578 TTLL1O95922 423 aa16.39■□□□□ 0.21
PABPC4-208ENST00000461578 TDO2P48775 406 aa16.39■□□□□ 0.21
PABPC4-208ENST00000461578 STAT2P52630 851 aa16.39■□□□□ 0.21
PABPC4-208ENST00000461578 GMCL1P1Q8NEA9 526 aa16.39■□□□□ 0.21
PABPC4-208ENST00000461578 MKL1Q969V6 931 aa16.39■□□□□ 0.21
PABPC4-208ENST00000461578 TRERF1Q96PN7 1200 aa16.39■□□□□ 0.21
PABPC4-208ENST00000461578 ALDH8A1Q9H2A2 487 aaPredicted RBP16.39■□□□□ 0.21
PABPC4-208ENST00000461578 EPB41L4AQ9HCS5 686 aaPredicted RBP16.39■□□□□ 0.21
PABPC4-208ENST00000461578 SCN5AQ14524 2016 aa16.39■□□□□ 0.21
PABPC4-208ENST00000461578 APPP05067 770 aa16.38■□□□□ 0.21
PABPC4-208ENST00000461578 HOXD11P31277 338 aaPredicted RBP16.38■□□□□ 0.21
PABPC4-208ENST00000461578 TAPT1Q6NXT6 567 aa16.38■□□□□ 0.21
PABPC4-208ENST00000461578 KIAA1211Q6ZU35 1233 aa16.38■□□□□ 0.21
PABPC4-208ENST00000461578 OSBP2Q969R2 916 aa16.38■□□□□ 0.21
PABPC4-208ENST00000461578 PURBQ96QR8 312 aaKnown RBP16.38■□□□□ 0.21
PABPC4-208ENST00000461578 LRFN3Q9BTN0 628 aa16.38■□□□□ 0.21
PABPC4-208ENST00000461578 ZNF536O15090 1300 aa16.38■□□□□ 0.21
PABPC4-208ENST00000461578 SMARCA5O60264 1052 aaPredicted RBP16.37■□□□□ 0.21
PABPC4-208ENST00000461578 TSPY3P0CV98 308 aa16.37■□□□□ 0.21
PABPC4-208ENST00000461578 TSPY8P0CW00 308 aa16.37■□□□□ 0.21
PABPC4-208ENST00000461578 FDX1P10109 184 aa16.37■□□□□ 0.21
PABPC4-208ENST00000461578 HNRNPUQ00839 825 aaKnown RBP eCLIP16.37■□□□□ 0.21
PABPC4-208ENST00000461578 MUM1L1Q5H9M0 696 aa16.37■□□□□ 0.21
PABPC4-208ENST00000461578 IQSEC1Q6DN90 963 aa16.37■□□□□ 0.21
PABPC4-208ENST00000461578 GIMAP6Q6P9H5 292 aa16.37■□□□□ 0.21
PABPC4-208ENST00000461578 PPP1R13LQ8WUF5 828 aa16.37■□□□□ 0.21
PABPC4-208ENST00000461578 ARNTL2Q8WYA1 636 aa16.37■□□□□ 0.21
PABPC4-208ENST00000461578 SEZ6LQ9BYH1 1024 aa16.37■□□□□ 0.21
PABPC4-208ENST00000461578 ZNF287Q9HBT7 754 aa16.37■□□□□ 0.21
PABPC4-208ENST00000461578 HCN4Q9Y3Q4 1203 aa16.37■□□□□ 0.21
PABPC4-208ENST00000461578 TNKSO95271 1327 aa16.37■□□□□ 0.21
PABPC4-208ENST00000461578 GPAA1O43292 621 aa16.36■□□□□ 0.21
PABPC4-208ENST00000461578 ARHGEF15O94989 841 aa16.36■□□□□ 0.21
PABPC4-208ENST00000461578 MYL3P08590 195 aa16.36■□□□□ 0.21
PABPC4-208ENST00000461578 MCCP23508 829 aa16.36■□□□□ 0.21
PABPC4-208ENST00000461578 SLC1A4P43007 532 aa16.36■□□□□ 0.21
PABPC4-208ENST00000461578 TKFCQ3LXA3 575 aa16.36■□□□□ 0.21
PABPC4-208ENST00000461578 NSMFQ6X4W1 530 aa16.36■□□□□ 0.21
PABPC4-208ENST00000461578 FAM160B2Q86V87 743 aa16.36■□□□□ 0.21
PABPC4-208ENST00000461578 CHURC1Q8WUH1 139 aa16.36■□□□□ 0.21
PABPC4-208ENST00000461578 STAG1Q8WVM7 1258 aa16.36■□□□□ 0.21
PABPC4-208ENST00000461578 LCTP09848 1927 aa16.35■□□□□ 0.21
PABPC4-208ENST00000461578 M0R2C6 588 aa16.35■□□□□ 0.21
PABPC4-208ENST00000461578 PFKMP08237 780 aa16.35■□□□□ 0.21
PABPC4-208ENST00000461578 SUPT20HL2P0C7V6 817 aa16.35■□□□□ 0.21
PABPC4-208ENST00000461578 ACTN1P12814 892 aa16.35■□□□□ 0.21
PABPC4-208ENST00000461578 FAM47CQ5HY64 1035 aa16.35■□□□□ 0.21
PABPC4-208ENST00000461578 KCTD1Q719H9 257 aa16.35■□□□□ 0.21
PABPC4-208ENST00000461578 RASGRP2Q7LDG7 609 aa16.35■□□□□ 0.21
PABPC4-208ENST00000461578 APPBP2Q92624 585 aa16.35■□□□□ 0.21
PABPC4-208ENST00000461578 CYP39A1Q9NYL5 469 aa16.35■□□□□ 0.21
PABPC4-208ENST00000461578 SYNPO2Q9UMS6 1093 aa16.35■□□□□ 0.21
PABPC4-208ENST00000461578 MTMR7Q9Y216 660 aa16.35■□□□□ 0.21
PABPC4-208ENST00000461578 Q9Y3F1 56 aa16.35■□□□□ 0.21
PABPC4-208ENST00000461578 FAM86C2PA6NEL3 165 aa16.34■□□□□ 0.21
PABPC4-208ENST00000461578 TLL1O43897 1013 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms