RNA–Protein interactions for RNA: ENST00000461525.5

COL1A2-202, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL1A2, Length 776 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-202ENST00000461525 PCSK9Q8NBP7 692 aaKnown RBP20.81■□□□□ 0.92
COL1A2-202ENST00000461525 TRIM43Q96BQ3 446 aaPredicted RBP20.81■□□□□ 0.92
COL1A2-202ENST00000461525 UPF3AQ9H1J1 476 aaKnown RBP20.81■□□□□ 0.92
COL1A2-202ENST00000461525 NT5C2P49902 561 aa20.8■□□□□ 0.92
COL1A2-202ENST00000461525 GJA9P57773 515 aa20.8■□□□□ 0.92
COL1A2-202ENST00000461525 ZNF543Q08ER8 600 aa20.8■□□□□ 0.92
COL1A2-202ENST00000461525 NOL8Q76FK4 1167 aaKnown RBP20.8■□□□□ 0.92
COL1A2-202ENST00000461525 GLT1D1Q96MS3 346 aa20.8■□□□□ 0.92
COL1A2-202ENST00000461525 SMCHD1A6NHR9 2005 aa20.79■□□□□ 0.92
COL1A2-202ENST00000461525 DCDC2CA8MYV0 355 aa20.79■□□□□ 0.92
COL1A2-202ENST00000461525 IRX5P78411 483 aaPredicted RBP20.79■□□□□ 0.92
COL1A2-202ENST00000461525 TNFAIP2Q03169 654 aa20.79■□□□□ 0.92
COL1A2-202ENST00000461525 DSCC1Q9BVC3 393 aa20.79■□□□□ 0.92
COL1A2-202ENST00000461525 PNMA2Q9UL42 364 aa20.79■□□□□ 0.92
COL1A2-202ENST00000461525 ASTN1O14525 1302 aa20.78■□□□□ 0.92
COL1A2-202ENST00000461525 ELP1O95163 1332 aa20.78■□□□□ 0.92
COL1A2-202ENST00000461525 ASGR1P07306 291 aa20.78■□□□□ 0.92
COL1A2-202ENST00000461525 SNHG28P0DPA3 235 aa20.78■□□□□ 0.92
COL1A2-202ENST00000461525 CCDC178Q5BJE1 867 aa20.78■□□□□ 0.92
COL1A2-202ENST00000461525 GNASQ5JWF2 1037 aa20.78■□□□□ 0.92
COL1A2-202ENST00000461525 Q7L0L9 218 aa20.78■□□□□ 0.92
COL1A2-202ENST00000461525 ANKRD33Q7Z3H0 272 aa20.78■□□□□ 0.92
COL1A2-202ENST00000461525 IQCA1Q86XH1 822 aa20.78■□□□□ 0.92
COL1A2-202ENST00000461525 DGKHQ86XP1 1220 aa20.78■□□□□ 0.92
COL1A2-202ENST00000461525 TOX2Q96NM4 488 aa20.78■□□□□ 0.92
COL1A2-202ENST00000461525 ZKSCAN3Q9BRR0 538 aa20.78■□□□□ 0.92
COL1A2-202ENST00000461525 TMEM39AQ9NV64 488 aa20.78■□□□□ 0.92
COL1A2-202ENST00000461525 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.77■□□□□ 0.92
COL1A2-202ENST00000461525 NFIBO00712 420 aa20.77■□□□□ 0.92
COL1A2-202ENST00000461525 KIAA0355O15063 1070 aa20.77■□□□□ 0.92
COL1A2-202ENST00000461525 KDM4AO75164 1064 aa20.77■□□□□ 0.92
COL1A2-202ENST00000461525 RAG1P15918 1043 aa20.77■□□□□ 0.92
COL1A2-202ENST00000461525 BAATQ14032 418 aaPredicted RBP20.77■□□□□ 0.92
COL1A2-202ENST00000461525 SHHQ15465 462 aa20.77■□□□□ 0.92
COL1A2-202ENST00000461525 IMMTQ16891 758 aaKnown RBP20.77■□□□□ 0.92
COL1A2-202ENST00000461525 GPATCH4Q5T3I0 446 aaKnown RBP20.77■□□□□ 0.92
COL1A2-202ENST00000461525 VTI1AQ96AJ9 217 aa20.77■□□□□ 0.92
COL1A2-202ENST00000461525 ADD3Q9UEY8 706 aaKnown RBP20.77■□□□□ 0.92
COL1A2-202ENST00000461525 CTNNA3Q9UI47 895 aa20.77■□□□□ 0.92
COL1A2-202ENST00000461525 DDX49Q9Y6V7 483 aaKnown RBP20.77■□□□□ 0.92
COL1A2-202ENST00000461525 ITGB8P26012 769 aa20.76■□□□□ 0.91
COL1A2-202ENST00000461525 C9orf50Q5SZB4 431 aa20.76■□□□□ 0.91
COL1A2-202ENST00000461525 EEPD1Q7L9B9 569 aa20.76■□□□□ 0.91
COL1A2-202ENST00000461525 TLK2Q86UE8 772 aa20.76■□□□□ 0.91
COL1A2-202ENST00000461525 FBXO16Q8IX29 292 aaPredicted RBP20.76■□□□□ 0.91
COL1A2-202ENST00000461525 MROH7Q68CQ1 1323 aa20.76■□□□□ 0.91
COL1A2-202ENST00000461525 WDR19Q8NEZ3 1342 aa20.76■□□□□ 0.91
COL1A2-202ENST00000461525 A0A0U1RQG5 324 aaPredicted RBP20.75■□□□□ 0.91
COL1A2-202ENST00000461525 PTPDC1A2A3K4 754 aa20.75■□□□□ 0.91
COL1A2-202ENST00000461525 B4E1Z4 1266 aa20.75■□□□□ 0.91
COL1A2-202ENST00000461525 CTAGE5O15320 804 aa20.75■□□□□ 0.91
COL1A2-202ENST00000461525 PDE4AP27815 886 aa20.75■□□□□ 0.91
COL1A2-202ENST00000461525 NKX3-2P78367 333 aa20.75■□□□□ 0.91
COL1A2-202ENST00000461525 BEX3Q00994 111 aa20.75■□□□□ 0.91
COL1A2-202ENST00000461525 FAAP100Q0VG06 881 aa20.75■□□□□ 0.91
COL1A2-202ENST00000461525 PNMA1Q8ND90 353 aa20.75■□□□□ 0.91
COL1A2-202ENST00000461525 PURBQ96QR8 312 aaKnown RBP20.75■□□□□ 0.91
COL1A2-202ENST00000461525 AP5M1Q9H0R1 490 aa20.75■□□□□ 0.91
COL1A2-202ENST00000461525 KAT14Q9H8E8 782 aa20.75■□□□□ 0.91
COL1A2-202ENST00000461525 VTA1Q9NP79 307 aa20.75■□□□□ 0.91
COL1A2-202ENST00000461525 GNEQ9Y223 722 aaKnown RBP20.75■□□□□ 0.91
COL1A2-202ENST00000461525 LTBP2Q14767 1821 aa20.74■□□□□ 0.91
COL1A2-202ENST00000461525 GOLGA8HP0CJ92 632 aa20.74■□□□□ 0.91
COL1A2-202ENST00000461525 SMPD1P17405 629 aa20.74■□□□□ 0.91
COL1A2-202ENST00000461525 ALDH5A1P51649 535 aaPredicted RBP20.74■□□□□ 0.91
COL1A2-202ENST00000461525 TTC22Q5TAA0 569 aa20.74■□□□□ 0.91
COL1A2-202ENST00000461525 IQSEC1Q6DN90 963 aa20.74■□□□□ 0.91
COL1A2-202ENST00000461525 SLC30A10Q6XR72 485 aa20.74■□□□□ 0.91
COL1A2-202ENST00000461525 MORC4Q8TE76 937 aa20.74■□□□□ 0.91
COL1A2-202ENST00000461525 CLEC4DQ8WXI8 215 aa20.74■□□□□ 0.91
COL1A2-202ENST00000461525 ZSCAN10Q96SZ4 725 aaPredicted RBP20.74■□□□□ 0.91
COL1A2-202ENST00000461525 PDGFCQ9NRA1 345 aa20.74■□□□□ 0.91
COL1A2-202ENST00000461525 MTMR10Q9NXD2 777 aa20.74■□□□□ 0.91
COL1A2-202ENST00000461525 LOC102724159A0A0B4J2E5 919 aa20.73■□□□□ 0.91
COL1A2-202ENST00000461525 ARVCFO00192 962 aa20.73■□□□□ 0.91
COL1A2-202ENST00000461525 DYNC1LI2O43237 492 aaPredicted RBP20.73■□□□□ 0.91
COL1A2-202ENST00000461525 GSPT1P15170 499 aaKnown RBP20.73■□□□□ 0.91
COL1A2-202ENST00000461525 CALML3P27482 149 aa20.73■□□□□ 0.91
COL1A2-202ENST00000461525 FPGSQ05932 587 aa20.73■□□□□ 0.91
COL1A2-202ENST00000461525 PWP2Q15269 919 aaKnown RBP20.73■□□□□ 0.91
COL1A2-202ENST00000461525 FSCN1Q16658 493 aaKnown RBP20.73■□□□□ 0.91
COL1A2-202ENST00000461525 TAPT1Q6NXT6 567 aa20.73■□□□□ 0.91
COL1A2-202ENST00000461525 RNF207Q6ZRF8 634 aa20.73■□□□□ 0.91
COL1A2-202ENST00000461525 KRT23Q9C075 422 aa20.73■□□□□ 0.91
COL1A2-202ENST00000461525 CNNM2Q9H8M5 875 aa20.73■□□□□ 0.91
COL1A2-202ENST00000461525 CABYRO75952 493 aa20.72■□□□□ 0.91
COL1A2-202ENST00000461525 CDK7P50613 346 aa20.72■□□□□ 0.91
COL1A2-202ENST00000461525 IRX6P78412 446 aaPredicted RBP20.72■□□□□ 0.91
COL1A2-202ENST00000461525 FAM109BQ6ICB4 259 aaPredicted RBP20.72■□□□□ 0.91
COL1A2-202ENST00000461525 CXCL17Q6UXB2 119 aa20.72■□□□□ 0.91
COL1A2-202ENST00000461525 KIAA1211Q6ZU35 1233 aa20.72■□□□□ 0.91
COL1A2-202ENST00000461525 ENAHQ8N8S7 591 aaPredicted RBP20.72■□□□□ 0.91
COL1A2-202ENST00000461525 ANKS1AQ92625 1134 aa20.72■□□□□ 0.91
COL1A2-202ENST00000461525 UBAC1Q9BSL1 405 aa20.72■□□□□ 0.91
COL1A2-202ENST00000461525 UBA5Q9GZZ9 404 aa20.72■□□□□ 0.91
COL1A2-202ENST00000461525 IL25Q9H293 177 aa20.72■□□□□ 0.91
COL1A2-202ENST00000461525 ZSWIM5Q9P217 1185 aa20.72■□□□□ 0.91
COL1A2-202ENST00000461525 TBX21Q9UL17 535 aa20.72■□□□□ 0.91
COL1A2-202ENST00000461525 Q9Y3F1 56 aa20.72■□□□□ 0.91
COL1A2-202ENST00000461525 DNAH12Q6ZR08 3092 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms