RNA–Protein interactions for RNA: ENST00000461488.5

SMIM7-204, Transcript of small integral membrane protein 7, human

TSL 3

Gene SMIM7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMIM7-204	ENST00000461488	KCTD2	Q14681	263 aa		11.79	□□□□□ -0.52
SMIM7-204	ENST00000461488	NBPF11	Q86T75	865 aa		11.79	□□□□□ -0.52
SMIM7-204	ENST00000461488	HOMER1	Q86YM7	354 aa		11.79	□□□□□ -0.52
SMIM7-204	ENST00000461488	SRBD1	Q8N5C6	995 aa	Known RBP	11.79	□□□□□ -0.52
SMIM7-204	ENST00000461488	ZNF713	Q8N859	430 aa	Predicted RBP	11.79	□□□□□ -0.52
SMIM7-204	ENST00000461488	ZSCAN31	Q96LW9	406 aa	Predicted RBP	11.79	□□□□□ -0.52
SMIM7-204	ENST00000461488	AGBL1	Q96MI9	1066 aa		11.79	□□□□□ -0.52
SMIM7-204	ENST00000461488	TRERF1	Q96PN7	1200 aa		11.79	□□□□□ -0.52
SMIM7-204	ENST00000461488	PIGS	Q96S52	555 aa		11.79	□□□□□ -0.52
SMIM7-204	ENST00000461488	NUDT12	Q9BQG2	462 aa		11.79	□□□□□ -0.52
SMIM7-204	ENST00000461488	SLK	Q9H2G2	1235 aa	Predicted RBP	11.79	□□□□□ -0.52
SMIM7-204	ENST00000461488	FAM217B	Q9NTX9	383 aa	Predicted RBP	11.79	□□□□□ -0.52
SMIM7-204	ENST00000461488	SLC5A4	Q9NY91	659 aa		11.79	□□□□□ -0.52
SMIM7-204	ENST00000461488	LIMCH1	Q9UPQ0	1083 aa		11.79	□□□□□ -0.52
SMIM7-204	ENST00000461488	MRPL11	Q9Y3B7	192 aa	Known RBP	11.79	□□□□□ -0.52
SMIM7-204	ENST00000461488	PFAS	O15067	1338 aa		11.79	□□□□□ -0.52
SMIM7-204	ENST00000461488	CPLX1	O14810	134 aa		11.78	□□□□□ -0.52
SMIM7-204	ENST00000461488	CDKL5	O76039	1030 aa		11.78	□□□□□ -0.52
SMIM7-204	ENST00000461488	ADD1	P35611	737 aa	Known RBP	11.78	□□□□□ -0.52
SMIM7-204	ENST00000461488	RGS2	P41220	211 aa		11.78	□□□□□ -0.52
SMIM7-204	ENST00000461488	SLC4A3	P48751	1232 aa		11.78	□□□□□ -0.52
SMIM7-204	ENST00000461488	MCM2	P49736	904 aa		11.78	□□□□□ -0.52
SMIM7-204	ENST00000461488	SNAP25	P60880	206 aa		11.78	□□□□□ -0.52
SMIM7-204	ENST00000461488	CCT2	P78371	535 aa	Known RBP	11.78	□□□□□ -0.52
SMIM7-204	ENST00000461488	MAP2K5	Q13163	448 aa		11.78	□□□□□ -0.52
SMIM7-204	ENST00000461488	IRF5	Q13568	498 aa		11.78	□□□□□ -0.52
SMIM7-204	ENST00000461488	SLC35G1	Q2M3R5	365 aa		11.78	□□□□□ -0.52
SMIM7-204	ENST00000461488	MORN1	Q5T089	497 aa		11.78	□□□□□ -0.52
SMIM7-204	ENST00000461488	FBXO46	Q6PJ61	603 aa	Predicted RBP	11.78	□□□□□ -0.52
SMIM7-204	ENST00000461488	TRMT44	Q8IYL2	757 aa	Known RBP	11.78	□□□□□ -0.52
SMIM7-204	ENST00000461488	SAMD3	Q8N6K7	520 aa		11.78	□□□□□ -0.52
SMIM7-204	ENST00000461488	ABHD8	Q96I13	439 aa		11.78	□□□□□ -0.52
SMIM7-204	ENST00000461488	MMP19	Q99542	508 aa		11.78	□□□□□ -0.52
SMIM7-204	ENST00000461488	RNF26	Q9BY78	433 aa	Predicted RBP	11.78	□□□□□ -0.52
SMIM7-204	ENST00000461488	SH2B1	Q9NRF2	756 aa	Predicted RBP	11.78	□□□□□ -0.52
SMIM7-204	ENST00000461488	TPCN1	Q9ULQ1	816 aa		11.78	□□□□□ -0.52
SMIM7-204	ENST00000461488	RIPK3	Q9Y572	518 aa		11.78	□□□□□ -0.52
SMIM7-204	ENST00000461488	MYH7B	A7E2Y1	1941 aa		11.78	□□□□□ -0.52
SMIM7-204	ENST00000461488	HOXC6	P09630	235 aa		11.77	□□□□□ -0.53
SMIM7-204	ENST00000461488	XRCC5	P13010	732 aa	Known RBP	11.77	□□□□□ -0.53
SMIM7-204	ENST00000461488	CAP1	Q01518	475 aa		11.77	□□□□□ -0.53
SMIM7-204	ENST00000461488	AKAP17A	Q02040	695 aa	Known RBP	11.77	□□□□□ -0.53
SMIM7-204	ENST00000461488	PRKCZ	Q05513	592 aa		11.77	□□□□□ -0.53
SMIM7-204	ENST00000461488	FUT2	Q10981	343 aa		11.77	□□□□□ -0.53
SMIM7-204	ENST00000461488	STK3	Q13188	491 aa		11.77	□□□□□ -0.53
SMIM7-204	ENST00000461488	NTRK3	Q16288	839 aa		11.77	□□□□□ -0.53
SMIM7-204	ENST00000461488	USH1G	Q495M9	461 aa		11.77	□□□□□ -0.53
SMIM7-204	ENST00000461488	NOL8	Q76FK4	1167 aa	Known RBP	11.77	□□□□□ -0.53
SMIM7-204	ENST00000461488	MCF2L2	Q86YR7	1114 aa		11.77	□□□□□ -0.53
SMIM7-204	ENST00000461488	TRIM22	Q8IYM9	498 aa		11.77	□□□□□ -0.53
SMIM7-204	ENST00000461488	CMTR1	Q8N1G2	835 aa	Known RBP	11.77	□□□□□ -0.53
SMIM7-204	ENST00000461488	ANKRD35	Q8N283	1001 aa		11.77	□□□□□ -0.53
SMIM7-204	ENST00000461488	RGS22	Q8NE09	1264 aa		11.77	□□□□□ -0.53
SMIM7-204	ENST00000461488	RAET1E	Q8TD07	263 aa		11.77	□□□□□ -0.53
SMIM7-204	ENST00000461488	USP6NL	Q92738	828 aa		11.77	□□□□□ -0.53
SMIM7-204	ENST00000461488	GTF3C6	Q969F1	213 aa		11.77	□□□□□ -0.53
SMIM7-204	ENST00000461488	APBA2	Q99767	749 aa		11.77	□□□□□ -0.53
SMIM7-204	ENST00000461488	HOMER2	Q9NSB8	354 aa		11.77	□□□□□ -0.53
SMIM7-204	ENST00000461488	GJD2	Q9UKL4	321 aa		11.77	□□□□□ -0.53
SMIM7-204	ENST00000461488	PTPN22	Q9Y2R2	807 aa		11.77	□□□□□ -0.53
SMIM7-204	ENST00000461488	PCDHA1	Q9Y5I3	950 aa		11.77	□□□□□ -0.53
SMIM7-204	ENST00000461488	PRPF3	O43395	683 aa	Known RBP	11.76	□□□□□ -0.53
SMIM7-204	ENST00000461488	ECM2	O94769	699 aa	Predicted RBP	11.76	□□□□□ -0.53
SMIM7-204	ENST00000461488	ADORA2A	P29274	412 aa		11.76	□□□□□ -0.53
SMIM7-204	ENST00000461488	FLT3LG	P49771	235 aa		11.76	□□□□□ -0.53
SMIM7-204	ENST00000461488	SSRP1	Q08945	709 aa	Known RBP	11.76	□□□□□ -0.53
SMIM7-204	ENST00000461488	SCRN1	Q12765	414 aa		11.76	□□□□□ -0.53
SMIM7-204	ENST00000461488	ME3	Q16798	604 aa		11.76	□□□□□ -0.53
SMIM7-204	ENST00000461488	MUM1L1	Q5H9M0	696 aa		11.76	□□□□□ -0.53
SMIM7-204	ENST00000461488	PPP1R18	Q6NYC8	613 aa		11.76	□□□□□ -0.53
SMIM7-204	ENST00000461488	DPP9	Q86TI2	863 aa		11.76	□□□□□ -0.53
SMIM7-204	ENST00000461488	TEX2	Q8IWB9	1127 aa		11.76	□□□□□ -0.53
SMIM7-204	ENST00000461488	CCDC82	Q8N4S0	544 aa		11.76	□□□□□ -0.53
SMIM7-204	ENST00000461488	SLAIN1	Q8ND83	568 aa		11.76	□□□□□ -0.53
SMIM7-204	ENST00000461488	DDX11	Q96FC9	970 aa		11.76	□□□□□ -0.53
SMIM7-204	ENST00000461488	LARP6	Q9BRS8	491 aa	Known RBP	11.76	□□□□□ -0.53
SMIM7-204	ENST00000461488	NCOA5	Q9HCD5	579 aa	Known RBP	11.76	□□□□□ -0.53
SMIM7-204	ENST00000461488	MAP3K20	Q9NYL2	800 aa	Known RBP	11.76	□□□□□ -0.53
SMIM7-204	ENST00000461488	GABRQ	Q9UN88	632 aa		11.76	□□□□□ -0.53
SMIM7-204	ENST00000461488	DIS3	Q9Y2L1	958 aa	Known RBP	11.76	□□□□□ -0.53
SMIM7-204	ENST00000461488	STK36	Q9NRP7	1315 aa		11.76	□□□□□ -0.53
SMIM7-204	ENST00000461488	DNAJC25-GNG10	A0A024R161	153 aa		11.75	□□□□□ -0.53
SMIM7-204	ENST00000461488	LOC102724159	A0A0B4J2E5	919 aa		11.75	□□□□□ -0.53
SMIM7-204	ENST00000461488	ADCY3	O60266	1144 aa		11.75	□□□□□ -0.53
SMIM7-204	ENST00000461488	PPP1R11	O60927	126 aa	Predicted RBP	11.75	□□□□□ -0.53
SMIM7-204	ENST00000461488	LARGE1	O95461	756 aa		11.75	□□□□□ -0.53
SMIM7-204	ENST00000461488	GHRHR	Q02643	423 aa		11.75	□□□□□ -0.53
SMIM7-204	ENST00000461488	PWP2	Q15269	919 aa	Known RBP	11.75	□□□□□ -0.53
SMIM7-204	ENST00000461488	PFKFB3	Q16875	520 aa	Predicted RBP	11.75	□□□□□ -0.53
SMIM7-204	ENST00000461488	NSMF	Q6X4W1	530 aa		11.75	□□□□□ -0.53
SMIM7-204	ENST00000461488	FAM177A1	Q8N128	213 aa	Predicted RBP	11.75	□□□□□ -0.53
SMIM7-204	ENST00000461488	PXYLP1	Q8TE99	480 aa		11.75	□□□□□ -0.53
SMIM7-204	ENST00000461488	CCDC12	Q8WUD4	166 aa	Predicted RBP	11.75	□□□□□ -0.53
SMIM7-204	ENST00000461488	CLEC4D	Q8WXI8	215 aa		11.75	□□□□□ -0.53
SMIM7-204	ENST00000461488	PIBF1	Q8WXW3	757 aa		11.75	□□□□□ -0.53
SMIM7-204	ENST00000461488	A1CF	Q9NQ94	594 aa	Known RBP	11.75	□□□□□ -0.53
SMIM7-204	ENST00000461488	PTCH2	Q9Y6C5	1203 aa		11.75	□□□□□ -0.53
SMIM7-204	ENST00000461488		V9GY48	417 aa	Predicted RBP	11.75	□□□□□ -0.53
SMIM7-204	ENST00000461488	POTEB2	H3BUK9	544 aa		11.74	□□□□□ -0.53
SMIM7-204	ENST00000461488	NFIB	O00712	420 aa		11.74	□□□□□ -0.53

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