RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 TBX21Q9UL17 535 aa17.39■□□□□ 0.37
SMPD4-216ENST00000461187 MROH7Q68CQ1 1323 aa17.39■□□□□ 0.37
SMPD4-216ENST00000461187 MYH7BA7E2Y1 1941 aa17.39■□□□□ 0.37
SMPD4-216ENST00000461187 A0A0D9SFI3 127 aa17.38■□□□□ 0.37
SMPD4-216ENST00000461187 ASB14A6NK59 587 aa17.38■□□□□ 0.37
SMPD4-216ENST00000461187 TIMP1P01033 207 aa17.38■□□□□ 0.37
SMPD4-216ENST00000461187 FGAP02671 866 aa17.38■□□□□ 0.37
SMPD4-216ENST00000461187 TNFAIP2Q03169 654 aa17.38■□□□□ 0.37
SMPD4-216ENST00000461187 MCMDC2Q4G0Z9 681 aa17.38■□□□□ 0.37
SMPD4-216ENST00000461187 DCAF4Q8WV16 495 aa17.38■□□□□ 0.37
SMPD4-216ENST00000461187 CYP39A1Q9NYL5 469 aa17.38■□□□□ 0.37
SMPD4-216ENST00000461187 MTMR7Q9Y216 660 aa17.38■□□□□ 0.37
SMPD4-216ENST00000461187 GNEQ9Y223 722 aaKnown RBP17.38■□□□□ 0.37
SMPD4-216ENST00000461187 DDX49Q9Y6V7 483 aaKnown RBP17.38■□□□□ 0.37
SMPD4-216ENST00000461187 SCN5AQ14524 2016 aa17.38■□□□□ 0.37
SMPD4-216ENST00000461187 A0A0U1RQG5 324 aaPredicted RBP17.37■□□□□ 0.37
SMPD4-216ENST00000461187 ARVCFO00192 962 aa17.37■□□□□ 0.37
SMPD4-216ENST00000461187 BEX3Q00994 111 aa17.37■□□□□ 0.37
SMPD4-216ENST00000461187 TTBK2Q6IQ55 1244 aa17.37■□□□□ 0.37
SMPD4-216ENST00000461187 TICAM2Q86XR7 235 aa17.37■□□□□ 0.37
SMPD4-216ENST00000461187 VTI1AQ96AJ9 217 aa17.37■□□□□ 0.37
SMPD4-216ENST00000461187 RANBP17Q9H2T7 1088 aaKnown RBP17.37■□□□□ 0.37
SMPD4-216ENST00000461187 CCPG1Q9ULG6 757 aa17.37■□□□□ 0.37
SMPD4-216ENST00000461187 SCN10AQ9Y5Y9 1956 aa17.37■□□□□ 0.37
SMPD4-216ENST00000461187 VCANP13611 3396 aa17.36■□□□□ 0.37
SMPD4-216ENST00000461187 ICAM1P05362 532 aa17.36■□□□□ 0.37
SMPD4-216ENST00000461187 HSPD1P10809 573 aaKnown RBP17.36■□□□□ 0.37
SMPD4-216ENST00000461187 CCDC96Q2M329 555 aa17.36■□□□□ 0.37
SMPD4-216ENST00000461187 MFSD5Q6N075 450 aa17.36■□□□□ 0.37
SMPD4-216ENST00000461187 BTNL9Q6UXG8 535 aa17.36■□□□□ 0.37
SMPD4-216ENST00000461187 ZNF589Q86UQ0 364 aaPredicted RBP17.36■□□□□ 0.37
SMPD4-216ENST00000461187 FAM126BQ8IXS8 530 aa17.36■□□□□ 0.37
SMPD4-216ENST00000461187 TMEM47Q9BQJ4 181 aa17.36■□□□□ 0.37
SMPD4-216ENST00000461187 TCP11L1Q9NUJ3 509 aa17.36■□□□□ 0.37
SMPD4-216ENST00000461187 ZMYM6O95789 1325 aa17.36■□□□□ 0.37
SMPD4-216ENST00000461187 TOP1P11387 765 aaKnown RBP17.35■□□□□ 0.37
SMPD4-216ENST00000461187 PTGS1P23219 599 aa17.35■□□□□ 0.37
SMPD4-216ENST00000461187 SLC16A2P36021 539 aa17.35■□□□□ 0.37
SMPD4-216ENST00000461187 NMIQ13287 307 aaPredicted RBP17.35■□□□□ 0.37
SMPD4-216ENST00000461187 RRP12Q5JTH9 1297 aaKnown RBP17.35■□□□□ 0.37
SMPD4-216ENST00000461187 TAPT1Q6NXT6 567 aa17.35■□□□□ 0.37
SMPD4-216ENST00000461187 NOL8Q76FK4 1167 aaKnown RBP17.35■□□□□ 0.37
SMPD4-216ENST00000461187 TLK2Q86UE8 772 aa17.35■□□□□ 0.37
SMPD4-216ENST00000461187 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.35■□□□□ 0.37
SMPD4-216ENST00000461187 PURBQ96QR8 312 aaKnown RBP17.35■□□□□ 0.37
SMPD4-216ENST00000461187 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.35■□□□□ 0.372e-6■■■□□ 19.1
SMPD4-216ENST00000461187 PDGFCQ9NRA1 345 aa17.35■□□□□ 0.37
SMPD4-216ENST00000461187 TOMM22Q9NS69 142 aa17.35■□□□□ 0.37
SMPD4-216ENST00000461187 CD4P01730 458 aa17.34■□□□□ 0.37
SMPD4-216ENST00000461187 SMPD1P17405 629 aa17.34■□□□□ 0.37
SMPD4-216ENST00000461187 SYDE2Q5VT97 1194 aa17.34■□□□□ 0.37
SMPD4-216ENST00000461187 CXCL17Q6UXB2 119 aa17.34■□□□□ 0.37
SMPD4-216ENST00000461187 NSMFQ6X4W1 530 aa17.34■□□□□ 0.37
SMPD4-216ENST00000461187 C16orf59Q7L2K0 433 aa17.34■□□□□ 0.37
SMPD4-216ENST00000461187 SLC43A3Q8NBI5 491 aa17.34■□□□□ 0.37
SMPD4-216ENST00000461187 MORC4Q8TE76 937 aa17.34■□□□□ 0.37
SMPD4-216ENST00000461187 MYLIPQ8WY64 445 aa17.34■□□□□ 0.37
SMPD4-216ENST00000461187 LNPKQ9C0E8 428 aa17.34■□□□□ 0.37
SMPD4-216ENST00000461187 FRMPD2Q68DX3 1309 aaPredicted RBP17.33■□□□□ 0.36
SMPD4-216ENST00000461187 CCDC171Q6TFL3 1326 aa17.33■□□□□ 0.36
SMPD4-216ENST00000461187 TMEM265A0A087WTH1 108 aa17.33■□□□□ 0.36
SMPD4-216ENST00000461187 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.33■□□□□ 0.36
SMPD4-216ENST00000461187 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.33■□□□□ 0.36
SMPD4-216ENST00000461187 TLR3O15455 904 aaKnown RBP17.33■□□□□ 0.36
SMPD4-216ENST00000461187 HAND2P61296 217 aa17.33■□□□□ 0.36
SMPD4-216ENST00000461187 PPIGQ13427 754 aaKnown RBP eCLIP17.33■□□□□ 0.365e-13■■■■□ 22
SMPD4-216ENST00000461187 FSCN1Q16658 493 aaKnown RBP17.33■□□□□ 0.36
SMPD4-216ENST00000461187 TMEM63BQ5T3F8 832 aa17.33■□□□□ 0.36
SMPD4-216ENST00000461187 IQSEC1Q6DN90 963 aa17.33■□□□□ 0.36
SMPD4-216ENST00000461187 EEPD1Q7L9B9 569 aa17.33■□□□□ 0.36
SMPD4-216ENST00000461187 FBXO16Q8IX29 292 aaPredicted RBP17.33■□□□□ 0.36
SMPD4-216ENST00000461187 AP5M1Q9H0R1 490 aa17.33■□□□□ 0.36
SMPD4-216ENST00000461187 Q9Y3F1 56 aa17.33■□□□□ 0.36
SMPD4-216ENST00000461187 BAZ2BQ9UIF8 2168 aaKnown RBP17.32■□□□□ 0.36
SMPD4-216ENST00000461187 TET1Q8NFU7 2136 aa17.32■□□□□ 0.36
SMPD4-216ENST00000461187 GRIN2DO15399 1336 aa17.32■□□□□ 0.36
SMPD4-216ENST00000461187 TRIM6-TRIM34B2RNG4 842 aa17.32■□□□□ 0.36
SMPD4-216ENST00000461187 NFIBO00712 420 aa17.32■□□□□ 0.36
SMPD4-216ENST00000461187 DYNC1LI2O43237 492 aaPredicted RBP17.32■□□□□ 0.36
SMPD4-216ENST00000461187 CABYRO75952 493 aa17.32■□□□□ 0.36
SMPD4-216ENST00000461187 PDHBP11177 359 aa17.32■□□□□ 0.36
SMPD4-216ENST00000461187 CSF2RAP15509 400 aa17.32■□□□□ 0.36
SMPD4-216ENST00000461187 BAATQ14032 418 aaPredicted RBP17.32■□□□□ 0.36
SMPD4-216ENST00000461187 TMEM240Q5SV17 173 aa17.32■□□□□ 0.36
SMPD4-216ENST00000461187 SMC5Q8IY18 1101 aa17.32■□□□□ 0.36
SMPD4-216ENST00000461187 MAFAQ8NHW3 353 aaPredicted RBP17.32■□□□□ 0.36
SMPD4-216ENST00000461187 PPP1R12CQ9BZL4 782 aa17.32■□□□□ 0.36
SMPD4-216ENST00000461187 VTA1Q9NP79 307 aa17.32■□□□□ 0.36
SMPD4-216ENST00000461187 GPCPD1Q9NPB8 672 aa17.32■□□□□ 0.36
SMPD4-216ENST00000461187 CHD9Q3L8U1 2897 aa17.31■□□□□ 0.36
SMPD4-216ENST00000461187 DNAJB2P25686 324 aa17.31■□□□□ 0.36
SMPD4-216ENST00000461187 ALDH5A1P51649 535 aaPredicted RBP17.31■□□□□ 0.36
SMPD4-216ENST00000461187 ITGA7Q13683 1181 aa17.31■□□□□ 0.36
SMPD4-216ENST00000461187 AKNAD1Q5T1N1 836 aa17.31■□□□□ 0.36
SMPD4-216ENST00000461187 RASIP1Q5U651 963 aa17.31■□□□□ 0.36
SMPD4-216ENST00000461187 TBC1D10CQ8IV04 446 aa17.31■□□□□ 0.36
SMPD4-216ENST00000461187 TMEM199Q8N511 208 aa17.31■□□□□ 0.36
SMPD4-216ENST00000461187 CLEC4DQ8WXI8 215 aa17.31■□□□□ 0.36
SMPD4-216ENST00000461187 RILPL2Q969X0 211 aa17.31■□□□□ 0.36
SMPD4-216ENST00000461187 TTC14Q96N46 770 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms