RNA–Protein interactions for RNA: ENST00000461004.1

RTN4-212, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 422 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-212ENST00000461004 TSPY2A6NKD2 308 aa8.62□□□□□ -1.03
RTN4-212ENST00000461004 B4E1Z4 1266 aa8.62□□□□□ -1.03
RTN4-212ENST00000461004 C19orf81C9J6K1 198 aa8.62□□□□□ -1.03
RTN4-212ENST00000461004 GPR25O00155 361 aa8.62□□□□□ -1.03
RTN4-212ENST00000461004 SLC27A2O14975 620 aa8.62□□□□□ -1.03
RTN4-212ENST00000461004 TSPY3P0CV98 308 aa8.62□□□□□ -1.03
RTN4-212ENST00000461004 TSPY8P0CW00 308 aa8.62□□□□□ -1.03
RTN4-212ENST00000461004 VCAM1P19320 739 aa8.62□□□□□ -1.03
RTN4-212ENST00000461004 CTCFP49711 727 aaPredicted RBP8.62□□□□□ -1.03
RTN4-212ENST00000461004 ARID5BQ14865 1188 aa8.62□□□□□ -1.03
RTN4-212ENST00000461004 NECTIN1Q15223 517 aa8.62□□□□□ -1.03
RTN4-212ENST00000461004 IMMTQ16891 758 aaKnown RBP8.62□□□□□ -1.03
RTN4-212ENST00000461004 USP17L2Q6R6M4 530 aa8.62□□□□□ -1.03
RTN4-212ENST00000461004 MFSD6Q6ZSS7 791 aa8.62□□□□□ -1.03
RTN4-212ENST00000461004 KIAA1211Q6ZU35 1233 aa8.62□□□□□ -1.03
RTN4-212ENST00000461004 CYB5R4Q7L1T6 521 aa8.62□□□□□ -1.03
RTN4-212ENST00000461004 VASH1Q7L8A9 365 aaPredicted RBP8.62□□□□□ -1.03
RTN4-212ENST00000461004 CHST3Q7LGC8 479 aa8.62□□□□□ -1.03
RTN4-212ENST00000461004 ZNF296Q8WUU4 475 aaPredicted RBP8.62□□□□□ -1.03
RTN4-212ENST00000461004 KCTD15Q96SI1 283 aaPredicted RBP8.62□□□□□ -1.03
RTN4-212ENST00000461004 P2RX7Q99572 595 aaKnown RBP8.62□□□□□ -1.03
RTN4-212ENST00000461004 ASCC2Q9H1I8 757 aaPredicted RBP8.62□□□□□ -1.03
RTN4-212ENST00000461004 KANSL2Q9H9L4 492 aa8.62□□□□□ -1.03
RTN4-212ENST00000461004 SAGE1Q9NXZ1 904 aa8.62□□□□□ -1.03
RTN4-212ENST00000461004 TMOD4Q9NZQ9 345 aa8.62□□□□□ -1.03
RTN4-212ENST00000461004 ZSWIM5Q9P217 1185 aa8.62□□□□□ -1.03
RTN4-212ENST00000461004 CTNNA3Q9UI47 895 aa8.62□□□□□ -1.03
RTN4-212ENST00000461004 CASP8AP2Q9UKL3 1982 aa8.62□□□□□ -1.03
RTN4-212ENST00000461004 MYH8P13535 1937 aa8.62□□□□□ -1.03
RTN4-212ENST00000461004 ADGRA2Q96PE1 1338 aa8.61□□□□□ -1.03
RTN4-212ENST00000461004 GREB1LQ9C091 1923 aaPredicted RBP8.61□□□□□ -1.03
RTN4-212ENST00000461004 E7EWF7 191 aa8.61□□□□□ -1.03
RTN4-212ENST00000461004 J3QL48 77 aa8.61□□□□□ -1.03
RTN4-212ENST00000461004 CTGFP29279 349 aa8.61□□□□□ -1.03
RTN4-212ENST00000461004 MCCD1P59942 119 aaPredicted RBP8.61□□□□□ -1.03
RTN4-212ENST00000461004 INTS6LQ5JSJ4 861 aaKnown RBP8.61□□□□□ -1.03
RTN4-212ENST00000461004 COL13A1Q5TAT6 717 aaPredicted RBP8.61□□□□□ -1.03
RTN4-212ENST00000461004 CREB3L3Q68CJ9 461 aa8.61□□□□□ -1.03
RTN4-212ENST00000461004 OTUD7BQ6GQQ9 843 aa8.61□□□□□ -1.03
RTN4-212ENST00000461004 RCSD1Q6JBY9 416 aa8.61□□□□□ -1.03
RTN4-212ENST00000461004 C17orf99Q6UX52 265 aa8.61□□□□□ -1.03
RTN4-212ENST00000461004 C12orf42Q96LP6 360 aa8.61□□□□□ -1.03
RTN4-212ENST00000461004 CFHR5Q9BXR6 569 aa8.61□□□□□ -1.03
RTN4-212ENST00000461004 PPP1R12CQ9BZL4 782 aa8.61□□□□□ -1.03
RTN4-212ENST00000461004 RPAP3Q9H6T3 665 aaPredicted RBP8.61□□□□□ -1.03
RTN4-212ENST00000461004 VCPKMTQ9H867 229 aa8.61□□□□□ -1.03
RTN4-212ENST00000461004 ZNF287Q9HBT7 754 aa8.61□□□□□ -1.03
RTN4-212ENST00000461004 ZFYVE28Q9HCC9 887 aa8.61□□□□□ -1.03
RTN4-212ENST00000461004 ARHGEF10LQ9HCE6 1279 aa8.61□□□□□ -1.03
RTN4-212ENST00000461004 FBXO28Q9NVF7 368 aa8.61□□□□□ -1.03
RTN4-212ENST00000461004 TOR4AQ9NXH8 423 aa8.61□□□□□ -1.03
RTN4-212ENST00000461004 NYAP2Q9P242 653 aa8.61□□□□□ -1.03
RTN4-212ENST00000461004 TFIP11Q9UBB9 837 aaKnown RBP8.61□□□□□ -1.03
RTN4-212ENST00000461004 MTMR7Q9Y216 660 aa8.61□□□□□ -1.03
RTN4-212ENST00000461004 PALM3A6NDB9 673 aaPredicted RBP8.6□□□□□ -1.03
RTN4-212ENST00000461004 F5H6K3 240 aa8.6□□□□□ -1.03
RTN4-212ENST00000461004 TLR2O60603 784 aa8.6□□□□□ -1.03
RTN4-212ENST00000461004 RGS20O76081 388 aa8.6□□□□□ -1.03
RTN4-212ENST00000461004 TTLL1O95922 423 aa8.6□□□□□ -1.03
RTN4-212ENST00000461004 NDUFB10O96000 172 aa8.6□□□□□ -1.03
RTN4-212ENST00000461004 ALDH1A1P00352 501 aa8.6□□□□□ -1.03
RTN4-212ENST00000461004 NR3C2P08235 984 aa8.6□□□□□ -1.03
RTN4-212ENST00000461004 HOXA7P31268 230 aaPredicted RBP8.6□□□□□ -1.03
RTN4-212ENST00000461004 NOVP48745 357 aa8.6□□□□□ -1.03
RTN4-212ENST00000461004 USP14P54578 494 aa8.6□□□□□ -1.03
RTN4-212ENST00000461004 ANTXR2P58335 489 aa8.6□□□□□ -1.03
RTN4-212ENST00000461004 KLRC3Q07444 240 aa8.6□□□□□ -1.03
RTN4-212ENST00000461004 FAM83BQ5T0W9 1011 aa8.6□□□□□ -1.03
RTN4-212ENST00000461004 CASC1Q6TDU7 716 aa8.6□□□□□ -1.03
RTN4-212ENST00000461004 CATSPERGQ6ZRH7 1159 aa8.6□□□□□ -1.03
RTN4-212ENST00000461004 CD99L2Q8TCZ2 262 aa8.6□□□□□ -1.03
RTN4-212ENST00000461004 MKL1Q969V6 931 aa8.6□□□□□ -1.03
RTN4-212ENST00000461004 TMEM47Q9BQJ4 181 aa8.6□□□□□ -1.03
RTN4-212ENST00000461004 ARHGAP39Q9C0H5 1083 aa8.6□□□□□ -1.03
RTN4-212ENST00000461004 RNF41Q9H4P4 317 aaPredicted RBP8.6□□□□□ -1.03
RTN4-212ENST00000461004 SENP2Q9HC62 589 aa8.6□□□□□ -1.03
RTN4-212ENST00000461004 TXNRD2Q9NNW7 524 aa8.6□□□□□ -1.03
RTN4-212ENST00000461004 STX8Q9UNK0 236 aa8.6□□□□□ -1.03
RTN4-212ENST00000461004 PLIN4Q96Q06 1357 aa8.6□□□□□ -1.03
RTN4-212ENST00000461004 LOC285556D6RIA3 1793 aa8.59□□□□□ -1.03
RTN4-212ENST00000461004 USP17L15C9J2P7 530 aa8.59□□□□□ -1.03
RTN4-212ENST00000461004 USP17L13C9JLJ4 530 aa8.59□□□□□ -1.03
RTN4-212ENST00000461004 USP17L11C9JVI0 530 aa8.59□□□□□ -1.03
RTN4-212ENST00000461004 USP17L18D6R9N7 530 aa8.59□□□□□ -1.03
RTN4-212ENST00000461004 USP17L22D6RA61 530 aa8.59□□□□□ -1.03
RTN4-212ENST00000461004 USP17L17D6RBQ6 530 aa8.59□□□□□ -1.03
RTN4-212ENST00000461004 USP17L19D6RCP7 530 aa8.59□□□□□ -1.03
RTN4-212ENST00000461004 USP17L20D6RJB6 530 aa8.59□□□□□ -1.03
RTN4-212ENST00000461004 CNMDO75829 334 aa8.59□□□□□ -1.03
RTN4-212ENST00000461004 ADH1CP00326 375 aa8.59□□□□□ -1.03
RTN4-212ENST00000461004 BCRP11274 1271 aa8.59□□□□□ -1.03
RTN4-212ENST00000461004 MCCP23508 829 aa8.59□□□□□ -1.03
RTN4-212ENST00000461004 FSHRP23945 695 aa8.59□□□□□ -1.03
RTN4-212ENST00000461004 RAB15P59190 212 aa8.59□□□□□ -1.03
RTN4-212ENST00000461004 PRR20EP86478 221 aa8.59□□□□□ -1.03
RTN4-212ENST00000461004 PRR20CP86479 221 aa8.59□□□□□ -1.03
RTN4-212ENST00000461004 PRR20DP86480 221 aa8.59□□□□□ -1.03
RTN4-212ENST00000461004 PRR20BP86481 221 aa8.59□□□□□ -1.03
RTN4-212ENST00000461004 PRR20AP86496 221 aa8.59□□□□□ -1.03
RTN4-212ENST00000461004 USP17L24Q0WX57 530 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms