RNA–Protein interactions for RNA: ENST00000460514.1

ABCA4-202, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 5

Gene ABCA4, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-202ENST00000460514 ADGRF4Q8IZF3 695 aa8.78□□□□□ -1
ABCA4-202ENST00000460514 SRBD1Q8N5C6 995 aaKnown RBP8.78□□□□□ -1
ABCA4-202ENST00000460514 ZNF713Q8N859 430 aaPredicted RBP8.78□□□□□ -1
ABCA4-202ENST00000460514 NECAB1Q8N987 351 aa8.78□□□□□ -1
ABCA4-202ENST00000460514 FAM184AQ8NB25 1140 aa8.78□□□□□ -1
ABCA4-202ENST00000460514 SMCR8Q8TEV9 937 aaPredicted RBP8.78□□□□□ -1
ABCA4-202ENST00000460514 INTS4Q96HW7 963 aaKnown RBP8.78□□□□□ -1
ABCA4-202ENST00000460514 UBA5Q9GZZ9 404 aa8.78□□□□□ -1
ABCA4-202ENST00000460514 ASCC2Q9H1I8 757 aaPredicted RBP8.78□□□□□ -1
ABCA4-202ENST00000460514 RIOX1Q9H6W3 641 aa8.78□□□□□ -1
ABCA4-202ENST00000460514 NCOA5Q9HCD5 579 aaKnown RBP8.78□□□□□ -1
ABCA4-202ENST00000460514 FAM217BQ9NTX9 383 aaPredicted RBP8.78□□□□□ -1
ABCA4-202ENST00000460514 PRR12Q9ULL5 1215 aa8.78□□□□□ -1
ABCA4-202ENST00000460514 SMC3Q9UQE7 1217 aa8.78□□□□□ -1
ABCA4-202ENST00000460514 CNTNAP5Q8WYK1 1306 aa8.78□□□□□ -1
ABCA4-202ENST00000460514 STK36Q9NRP7 1315 aa8.78□□□□□ -1
ABCA4-202ENST00000460514 PNMA6FA0A0J9YX94 578 aa8.77□□□□□ -1.01
ABCA4-202ENST00000460514 ZBTB5O15062 677 aa8.77□□□□□ -1.01
ABCA4-202ENST00000460514 PRPF3O43395 683 aaKnown RBP8.77□□□□□ -1.01
ABCA4-202ENST00000460514 FMNL1O95466 1100 aaPredicted RBP8.77□□□□□ -1.01
ABCA4-202ENST00000460514 PDIA4P13667 645 aaKnown RBP8.77□□□□□ -1.01
ABCA4-202ENST00000460514 COPB2P35606 906 aa8.77□□□□□ -1.01
ABCA4-202ENST00000460514 SLC16A2P36021 539 aa8.77□□□□□ -1.01
ABCA4-202ENST00000460514 VEGFBP49765 207 aa8.77□□□□□ -1.01
ABCA4-202ENST00000460514 OAZ1P54368 228 aa8.77□□□□□ -1.01
ABCA4-202ENST00000460514 HERVK_113P62684 666 aa8.77□□□□□ -1.01
ABCA4-202ENST00000460514 DGKZQ13574 1117 aa8.77□□□□□ -1.01
ABCA4-202ENST00000460514 TAF1CQ15572 869 aaPredicted RBP8.77□□□□□ -1.01
ABCA4-202ENST00000460514 NTRK3Q16288 839 aa8.77□□□□□ -1.01
ABCA4-202ENST00000460514 LBX2Q6XYB7 198 aa8.77□□□□□ -1.01
ABCA4-202ENST00000460514 RASGRP2Q7LDG7 609 aa8.77□□□□□ -1.01
ABCA4-202ENST00000460514 FAM177A1Q8N128 213 aaPredicted RBP8.77□□□□□ -1.01
ABCA4-202ENST00000460514 CCDC82Q8N4S0 544 aa8.77□□□□□ -1.01
ABCA4-202ENST00000460514 CCDC12Q8WUD4 166 aaPredicted RBP8.77□□□□□ -1.01
ABCA4-202ENST00000460514 SLC26A6Q9BXS9 759 aa8.77□□□□□ -1.01
ABCA4-202ENST00000460514 RANBP17Q9H2T7 1088 aaKnown RBP8.77□□□□□ -1.01
ABCA4-202ENST00000460514 ZFYVE28Q9HCC9 887 aa8.77□□□□□ -1.01
ABCA4-202ENST00000460514 VAT1LQ9HCJ6 419 aa8.77□□□□□ -1.01
ABCA4-202ENST00000460514 FBXO28Q9NVF7 368 aa8.77□□□□□ -1.01
ABCA4-202ENST00000460514 ORC3Q9UBD5 711 aaPredicted RBP8.77□□□□□ -1.01
ABCA4-202ENST00000460514 PTPDC1A2A3K4 754 aa8.76□□□□□ -1.01
ABCA4-202ENST00000460514 C2orf72A6NCS6 295 aa8.76□□□□□ -1.01
ABCA4-202ENST00000460514 SPDYE16A6NNV3 312 aaPredicted RBP8.76□□□□□ -1.01
ABCA4-202ENST00000460514 VWA5AO00534 786 aa8.76□□□□□ -1.01
ABCA4-202ENST00000460514 AOC2O75106 756 aa8.76□□□□□ -1.01
ABCA4-202ENST00000460514 SCG2P13521 617 aa8.76□□□□□ -1.01
ABCA4-202ENST00000460514 PDCP20941 246 aa8.76□□□□□ -1.01
ABCA4-202ENST00000460514 CCNA1P78396 465 aa8.76□□□□□ -1.01
ABCA4-202ENST00000460514 FUT2Q10981 343 aa8.76□□□□□ -1.01
ABCA4-202ENST00000460514 TRIM29Q14134 588 aa8.76□□□□□ -1.01
ABCA4-202ENST00000460514 CDC37Q16543 378 aaPredicted RBP8.76□□□□□ -1.01
ABCA4-202ENST00000460514 TKFCQ3LXA3 575 aa8.76□□□□□ -1.01
ABCA4-202ENST00000460514 FBXO11Q86XK2 927 aa8.76□□□□□ -1.01
ABCA4-202ENST00000460514 HOMER1Q86YM7 354 aa8.76□□□□□ -1.01
ABCA4-202ENST00000460514 TEX2Q8IWB9 1127 aa8.76□□□□□ -1.01
ABCA4-202ENST00000460514 CMTR1Q8N1G2 835 aaKnown RBP8.76□□□□□ -1.01
ABCA4-202ENST00000460514 FAM43AQ8N2R8 423 aa8.76□□□□□ -1.01
ABCA4-202ENST00000460514 NSUN7Q8NE18 718 aaKnown RBP8.76□□□□□ -1.01
ABCA4-202ENST00000460514 CCDC148Q8NFR7 591 aa8.76□□□□□ -1.01
ABCA4-202ENST00000460514 PHKBQ93100 1093 aa8.76□□□□□ -1.01
ABCA4-202ENST00000460514 ATG4CQ96DT6 458 aa8.76□□□□□ -1.01
ABCA4-202ENST00000460514 MTMR8Q96EF0 704 aa8.76□□□□□ -1.01
ABCA4-202ENST00000460514 P2RX7Q99572 595 aaKnown RBP8.76□□□□□ -1.01
ABCA4-202ENST00000460514 PTPN18Q99952 460 aa8.76□□□□□ -1.01
ABCA4-202ENST00000460514 BEGAINQ9BUH8 593 aa8.76□□□□□ -1.01
ABCA4-202ENST00000460514 AMNQ9BXJ7 453 aa8.76□□□□□ -1.01
ABCA4-202ENST00000460514 JMJD4Q9H9V9 463 aa8.76□□□□□ -1.01
ABCA4-202ENST00000460514 SLC38A10Q9HBR0 1119 aa8.76□□□□□ -1.01
ABCA4-202ENST00000460514 ADAMTS5Q9UNA0 930 aa8.76□□□□□ -1.01
ABCA4-202ENST00000460514 RABGAP1Q9Y3P9 1069 aa8.76□□□□□ -1.01
ABCA4-202ENST00000460514 V9GY48 417 aaPredicted RBP8.76□□□□□ -1.01
ABCA4-202ENST00000460514 IGF2BP3O00425 579 aaKnown RBP eCLIP8.75□□□□□ -1.01
ABCA4-202ENST00000460514 ATP2A1O14983 1001 aa8.75□□□□□ -1.01
ABCA4-202ENST00000460514 CA12O43570 354 aa8.75□□□□□ -1.01
ABCA4-202ENST00000460514 CYTH3O43739 400 aa8.75□□□□□ -1.01
ABCA4-202ENST00000460514 SLC34A2O95436 690 aa8.75□□□□□ -1.01
ABCA4-202ENST00000460514 SLC25A27O95847 323 aa8.75□□□□□ -1.01
ABCA4-202ENST00000460514 ICAM1P05362 532 aa8.75□□□□□ -1.01
ABCA4-202ENST00000460514 HTRA3P83110 453 aa8.75□□□□□ -1.01
ABCA4-202ENST00000460514 MAP2K1Q02750 393 aaPredicted RBP8.75□□□□□ -1.01
ABCA4-202ENST00000460514 PFKFB3Q16875 520 aaPredicted RBP8.75□□□□□ -1.01
ABCA4-202ENST00000460514 QRICH1Q2TAL8 776 aa8.75□□□□□ -1.01
ABCA4-202ENST00000460514 PPP1R18Q6NYC8 613 aa8.75□□□□□ -1.01
ABCA4-202ENST00000460514 CCDC174Q6PII3 467 aa8.75□□□□□ -1.01
ABCA4-202ENST00000460514 NBPF11Q86T75 865 aa8.75□□□□□ -1.01
ABCA4-202ENST00000460514 CCAR1Q8IX12 1150 aaKnown RBP8.75□□□□□ -1.01
ABCA4-202ENST00000460514 SMARCC2Q8TAQ2 1214 aa8.75□□□□□ -1.01
ABCA4-202ENST00000460514 PIBF1Q8WXW3 757 aa8.75□□□□□ -1.01
ABCA4-202ENST00000460514 PIGSQ96S52 555 aa8.75□□□□□ -1.01
ABCA4-202ENST00000460514 PAGR1Q9BTK6 254 aa8.75□□□□□ -1.01
ABCA4-202ENST00000460514 TEX13BQ9BXU2 312 aa8.75□□□□□ -1.01
ABCA4-202ENST00000460514 MAF1Q9H063 256 aa8.75□□□□□ -1.01
ABCA4-202ENST00000460514 CRISPLD2Q9H0B8 497 aa8.75□□□□□ -1.01
ABCA4-202ENST00000460514 GLT8D2Q9H1C3 349 aa8.75□□□□□ -1.01
ABCA4-202ENST00000460514 CPVLQ9H3G5 476 aa8.75□□□□□ -1.01
ABCA4-202ENST00000460514 CWC22Q9HCG8 908 aaKnown RBP8.75□□□□□ -1.01
ABCA4-202ENST00000460514 SH3GLB2Q9NR46 395 aa8.75□□□□□ -1.01
ABCA4-202ENST00000460514 CCPG1Q9ULG6 757 aa8.75□□□□□ -1.01
ABCA4-202ENST00000460514 MRPL11Q9Y3B7 192 aaKnown RBP8.75□□□□□ -1.01
ABCA4-202ENST00000460514 ABCB11O95342 1321 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms