RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 EPHB3P54753 998 aa5.19□□□□□ -1.58
RFC4-211ENST00000460408 SLC7A5Q01650 507 aa5.19□□□□□ -1.58
RFC4-211ENST00000460408 RASGRF1Q13972 1273 aa5.19□□□□□ -1.58
RFC4-211ENST00000460408 NCAPHQ15003 741 aa5.19□□□□□ -1.58
RFC4-211ENST00000460408 NFE2L2Q16236 605 aa5.19□□□□□ -1.58
RFC4-211ENST00000460408 NBPF12Q5TAG4 269 aaPredicted RBP5.19□□□□□ -1.58
RFC4-211ENST00000460408 GIMAP6Q6P9H5 292 aa5.19□□□□□ -1.58
RFC4-211ENST00000460408 NOP9Q86U38 636 aaKnown RBP5.19□□□□□ -1.58
RFC4-211ENST00000460408 SIRT2Q8IXJ6 389 aa5.19□□□□□ -1.58
RFC4-211ENST00000460408 ENOX1Q8TC92 643 aaKnown RBP5.19□□□□□ -1.58
RFC4-211ENST00000460408 DEPDC7Q96QD5 511 aa5.19□□□□□ -1.58
RFC4-211ENST00000460408 CNTD2Q9H8S5 307 aa5.19□□□□□ -1.58
RFC4-211ENST00000460408 SIRT5Q9NXA8 310 aa5.19□□□□□ -1.58
RFC4-211ENST00000460408 IRS4O14654 1257 aaPredicted RBP5.18□□□□□ -1.58
RFC4-211ENST00000460408 SHOXO15266 292 aa5.18□□□□□ -1.58
RFC4-211ENST00000460408 CBFA2T2O43439 604 aa5.18□□□□□ -1.58
RFC4-211ENST00000460408 DDAH1O94760 285 aa5.18□□□□□ -1.58
RFC4-211ENST00000460408 VIPR1P32241 457 aa5.18□□□□□ -1.58
RFC4-211ENST00000460408 KIR2DL1P43626 348 aaPredicted RBP5.18□□□□□ -1.58
RFC4-211ENST00000460408 KIR2DL2P43627 348 aaPredicted RBP5.18□□□□□ -1.58
RFC4-211ENST00000460408 YBX1P67809 324 aaKnown RBP5.18□□□□□ -1.58
RFC4-211ENST00000460408 BBS9Q3SYG4 887 aa5.18□□□□□ -1.58
RFC4-211ENST00000460408 TDRD10Q5VZ19 366 aaKnown RBP5.18□□□□□ -1.58
RFC4-211ENST00000460408 ERICH6BQ5W0A0 696 aa5.18□□□□□ -1.58
RFC4-211ENST00000460408 KRTAP5-3Q6L8H2 238 aa5.18□□□□□ -1.58
RFC4-211ENST00000460408 KIAA1211LQ6NV74 962 aa5.18□□□□□ -1.58
RFC4-211ENST00000460408 RNF111Q6ZNA4 994 aa5.18□□□□□ -1.58
RFC4-211ENST00000460408 SMARCC1Q92922 1105 aaPredicted RBP5.18□□□□□ -1.58
RFC4-211ENST00000460408 SRPK1Q96SB4 655 aaKnown RBP5.18□□□□□ -1.58
RFC4-211ENST00000460408 SUSD2Q9UGT4 822 aa5.18□□□□□ -1.58
RFC4-211ENST00000460408 PDPK1O15530 556 aa5.17□□□□□ -1.58
RFC4-211ENST00000460408 USP2O75604 605 aaPredicted RBP5.17□□□□□ -1.58
RFC4-211ENST00000460408 ADRB1P08588 477 aa5.17□□□□□ -1.58
RFC4-211ENST00000460408 CLEC16AQ2KHT3 1053 aa5.17□□□□□ -1.58
RFC4-211ENST00000460408 GNPTABQ3T906 1256 aa5.17□□□□□ -1.58
RFC4-211ENST00000460408 ANKRD39Q53RE8 183 aa5.17□□□□□ -1.58
RFC4-211ENST00000460408 AXDND1Q5T1B0 1012 aaPredicted RBP5.17□□□□□ -1.58
RFC4-211ENST00000460408 SP8Q8IXZ3 490 aa5.17□□□□□ -1.58
RFC4-211ENST00000460408 USHBP1Q8N6Y0 703 aa5.17□□□□□ -1.58
RFC4-211ENST00000460408 ZNF513Q8N8E2 541 aaPredicted RBP5.17□□□□□ -1.58
RFC4-211ENST00000460408 ST13P5Q8NFI4 369 aaPredicted RBP5.17□□□□□ -1.58
RFC4-211ENST00000460408 FEZF2Q8TBJ5 459 aa5.17□□□□□ -1.58
RFC4-211ENST00000460408 BORCS6Q96GS4 357 aa5.17□□□□□ -1.58
RFC4-211ENST00000460408 MAP6Q96JE9 813 aa5.17□□□□□ -1.58
RFC4-211ENST00000460408 ZNF512BQ96KM6 892 aaPredicted RBP5.17□□□□□ -1.58
RFC4-211ENST00000460408 TBX22Q9Y458 520 aa5.17□□□□□ -1.58
RFC4-211ENST00000460408 SUSD5O60279 629 aa5.16□□□□□ -1.58
RFC4-211ENST00000460408 PNLIPP16233 465 aa5.16□□□□□ -1.58
RFC4-211ENST00000460408 RPL10P27635 214 aaKnown RBP5.16□□□□□ -1.58
RFC4-211ENST00000460408 RNF4P78317 190 aa5.16□□□□□ -1.58
RFC4-211ENST00000460408 DCAF15Q66K64 600 aa5.16□□□□□ -1.58
RFC4-211ENST00000460408 EEPD1Q7L9B9 569 aa5.16□□□□□ -1.58
RFC4-211ENST00000460408 JAZF1Q86VZ6 243 aa5.16□□□□□ -1.58
RFC4-211ENST00000460408 TMEFF1Q8IYR6 380 aa5.16□□□□□ -1.58
RFC4-211ENST00000460408 SYTL5Q8TDW5 730 aaPredicted RBP5.16□□□□□ -1.58
RFC4-211ENST00000460408 ZNF669Q96BR6 464 aaPredicted RBP5.16□□□□□ -1.58
RFC4-211ENST00000460408 MRFAP1L1Q96HT8 127 aa5.16□□□□□ -1.58
RFC4-211ENST00000460408 TEPSINQ96N21 525 aa5.16□□□□□ -1.58
RFC4-211ENST00000460408 HAUS7Q99871 368 aa5.16□□□□□ -1.58
RFC4-211ENST00000460408 HDAC8Q9BY41 377 aa5.16□□□□□ -1.58
RFC4-211ENST00000460408 KLHL25Q9H0H3 589 aa5.16□□□□□ -1.58
RFC4-211ENST00000460408 CCDC85CA6NKD9 419 aa5.15□□□□□ -1.59
RFC4-211ENST00000460408 ABLIM1O14639 778 aa5.15□□□□□ -1.59
RFC4-211ENST00000460408 TP53P04637 393 aaPredicted RBP5.15□□□□□ -1.59
RFC4-211ENST00000460408 EPHX1P07099 455 aa5.15□□□□□ -1.59
RFC4-211ENST00000460408 CDR1P51861 262 aa5.15□□□□□ -1.59
RFC4-211ENST00000460408 ZNF143P52747 638 aaPredicted RBP5.15□□□□□ -1.59
RFC4-211ENST00000460408 ERVFRD-1P60508 538 aa5.15□□□□□ -1.59
RFC4-211ENST00000460408 NMIQ13287 307 aaPredicted RBP5.15□□□□□ -1.59
RFC4-211ENST00000460408 SLC14A2Q15849 920 aa5.15□□□□□ -1.59
RFC4-211ENST00000460408 NBPF9Q3BBW0 867 aa5.15□□□□□ -1.59
RFC4-211ENST00000460408 SLC10A6Q3KNW5 377 aa5.15□□□□□ -1.59
RFC4-211ENST00000460408 OLFML2BQ68BL8 750 aa5.15□□□□□ -1.59
RFC4-211ENST00000460408 CNKSR3Q6P9H4 555 aa5.15□□□□□ -1.59
RFC4-211ENST00000460408 SPATC1Q76KD6 591 aa5.15□□□□□ -1.59
RFC4-211ENST00000460408 WAPLQ7Z5K2 1190 aa5.15□□□□□ -1.59
RFC4-211ENST00000460408 FAM129CQ86XR2 697 aa5.15□□□□□ -1.59
RFC4-211ENST00000460408 CCDC144CPQ8IYA2 1237 aa5.15□□□□□ -1.59
RFC4-211ENST00000460408 C7orf61Q8IZ16 206 aa5.15□□□□□ -1.59
RFC4-211ENST00000460408 JMYQ8N9B5 988 aa5.15□□□□□ -1.59
RFC4-211ENST00000460408 DAGLBQ8NCG7 672 aa5.15□□□□□ -1.59
RFC4-211ENST00000460408 MZB1Q8WU39 189 aa5.15□□□□□ -1.59
RFC4-211ENST00000460408 MKRN2Q9H000 416 aaKnown RBP5.15□□□□□ -1.59
RFC4-211ENST00000460408 LUC7LQ9NQ29 371 aaKnown RBP5.15□□□□□ -1.59
RFC4-211ENST00000460408 FAM86C1Q9NVL1 165 aa5.15□□□□□ -1.59
RFC4-211ENST00000460408 ZMYM5Q9UJ78 669 aa5.15□□□□□ -1.59
RFC4-211ENST00000460408 TMEM82A0PJX8 343 aa5.14□□□□□ -1.59
RFC4-211ENST00000460408 ZC3H12DA2A288 527 aaKnown RBP5.14□□□□□ -1.59
RFC4-211ENST00000460408 ANKRD34BA5PLL1 514 aa5.14□□□□□ -1.59
RFC4-211ENST00000460408 CD247P20963 164 aa5.14□□□□□ -1.59
RFC4-211ENST00000460408 EFEMP1Q12805 493 aa5.14□□□□□ -1.59
RFC4-211ENST00000460408 SNW1Q13573 536 aaKnown RBP5.14□□□□□ -1.59
RFC4-211ENST00000460408 AUHQ13825 339 aaKnown RBP5.14□□□□□ -1.59
RFC4-211ENST00000460408 VMACQ2NL98 169 aa5.14□□□□□ -1.59
RFC4-211ENST00000460408 CEP128Q6ZU80 1094 aa5.14□□□□□ -1.59
RFC4-211ENST00000460408 ZDHHC14Q8IZN3 488 aa5.14□□□□□ -1.59
RFC4-211ENST00000460408 NLGN1Q8N2Q7 840 aa5.14□□□□□ -1.59
RFC4-211ENST00000460408 SYT8Q8NBV8 401 aa5.14□□□□□ -1.59
RFC4-211ENST00000460408 HHIPL1Q96JK4 782 aa5.14□□□□□ -1.59
RFC4-211ENST00000460408 DNAJC7Q99615 494 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms