RNA–Protein interactions for RNA: ENST00000460176.6

GARNL3-211, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-211ENST00000460176 LLPHQ9BRT6 129 aaKnown RBP11.86□□□□□ -0.51
GARNL3-211ENST00000460176 SLC26A6Q9BXS9 759 aa11.86□□□□□ -0.51
GARNL3-211ENST00000460176 TEX13BQ9BXU2 312 aa11.86□□□□□ -0.51
GARNL3-211ENST00000460176 SPATC1LQ9H0A9 340 aa11.86□□□□□ -0.51
GARNL3-211ENST00000460176 V9GY48 417 aaPredicted RBP11.86□□□□□ -0.51
GARNL3-211ENST00000460176 ZNF236Q9UL36 1845 aa11.86□□□□□ -0.51
GARNL3-211ENST00000460176 PTPDC1A2A3K4 754 aa11.85□□□□□ -0.51
GARNL3-211ENST00000460176 STAT3P40763 770 aa11.85□□□□□ -0.51
GARNL3-211ENST00000460176 SSRP1Q08945 709 aaKnown RBP11.85□□□□□ -0.51
GARNL3-211ENST00000460176 PKN1Q16512 942 aa11.85□□□□□ -0.51
GARNL3-211ENST00000460176 SNRNP48Q6IEG0 339 aaKnown RBP11.85□□□□□ -0.51
GARNL3-211ENST00000460176 FBXO11Q86XK2 927 aa11.85□□□□□ -0.51
GARNL3-211ENST00000460176 RIOX2Q8IUF8 465 aa11.85□□□□□ -0.51
GARNL3-211ENST00000460176 SMARCC2Q8TAQ2 1214 aa11.85□□□□□ -0.51
GARNL3-211ENST00000460176 MOV10L1Q9BXT6 1211 aaKnown RBP11.85□□□□□ -0.51
GARNL3-211ENST00000460176 CCPG1Q9ULG6 757 aa11.85□□□□□ -0.51
GARNL3-211ENST00000460176 RIPK3Q9Y572 518 aa11.85□□□□□ -0.51
GARNL3-211ENST00000460176 CTDP1Q9Y5B0 961 aaPredicted RBP11.85□□□□□ -0.51
GARNL3-211ENST00000460176 LCTP09848 1927 aa11.85□□□□□ -0.51
GARNL3-211ENST00000460176 GPR25O00155 361 aa11.84□□□□□ -0.51
GARNL3-211ENST00000460176 FDPSP14324 419 aaKnown RBP11.84□□□□□ -0.51
GARNL3-211ENST00000460176 PLS1Q14651 629 aa11.84□□□□□ -0.51
GARNL3-211ENST00000460176 PFKFB3Q16875 520 aaPredicted RBP11.84□□□□□ -0.51
GARNL3-211ENST00000460176 NOM1Q5C9Z4 860 aaKnown RBP11.84□□□□□ -0.51
GARNL3-211ENST00000460176 WWC2Q6AWC2 1192 aa11.84□□□□□ -0.51
GARNL3-211ENST00000460176 TRIM22Q8IYM9 498 aa11.84□□□□□ -0.51
GARNL3-211ENST00000460176 SHCBP1Q8NEM2 672 aa11.84□□□□□ -0.51
GARNL3-211ENST00000460176 BEGAINQ9BUH8 593 aa11.84□□□□□ -0.51
GARNL3-211ENST00000460176 AMNQ9BXJ7 453 aa11.84□□□□□ -0.51
GARNL3-211ENST00000460176 PORCNQ9H237 461 aa11.84□□□□□ -0.51
GARNL3-211ENST00000460176 RBM27Q9P2N5 1060 aaKnown RBP11.84□□□□□ -0.51
GARNL3-211ENST00000460176 SEC63Q9UGP8 760 aaKnown RBP11.84□□□□□ -0.51
GARNL3-211ENST00000460176 ABCB11O95342 1321 aa11.84□□□□□ -0.51
GARNL3-211ENST00000460176 DEXIO95424 95 aa11.83□□□□□ -0.52
GARNL3-211ENST00000460176 SLC25A27O95847 323 aa11.83□□□□□ -0.52
GARNL3-211ENST00000460176 ALAS1P13196 640 aa11.83□□□□□ -0.52
GARNL3-211ENST00000460176 SCG2P13521 617 aa11.83□□□□□ -0.52
GARNL3-211ENST00000460176 PRKAR2AP13861 404 aaKnown RBP11.83□□□□□ -0.52
GARNL3-211ENST00000460176 SLC4A3P48751 1232 aa11.83□□□□□ -0.52
GARNL3-211ENST00000460176 AKAP17AQ02040 695 aaKnown RBP11.83□□□□□ -0.52
GARNL3-211ENST00000460176 TKFCQ3LXA3 575 aa11.83□□□□□ -0.52
GARNL3-211ENST00000460176 USH1GQ495M9 461 aa11.83□□□□□ -0.52
GARNL3-211ENST00000460176 MUM1L1Q5H9M0 696 aa11.83□□□□□ -0.52
GARNL3-211ENST00000460176 HEATR3Q7Z4Q2 680 aa11.83□□□□□ -0.52
GARNL3-211ENST00000460176 CLEC4DQ8WXI8 215 aa11.83□□□□□ -0.52
GARNL3-211ENST00000460176 GPKOWQ92917 476 aaPredicted RBP eCLIP11.83□□□□□ -0.52
GARNL3-211ENST00000460176 COA7Q96BR5 231 aa11.83□□□□□ -0.52
GARNL3-211ENST00000460176 SHISA4Q96DD7 197 aa11.83□□□□□ -0.52
GARNL3-211ENST00000460176 DDX11Q96FC9 970 aa11.83□□□□□ -0.52
GARNL3-211ENST00000460176 AIFM3Q96NN9 605 aa11.83□□□□□ -0.52
GARNL3-211ENST00000460176 EFCC1Q9HA90 598 aa11.83□□□□□ -0.52
GARNL3-211ENST00000460176 RNF146Q9NTX7 359 aa11.83□□□□□ -0.52
GARNL3-211ENST00000460176 ORC3Q9UBD5 711 aaPredicted RBP11.83□□□□□ -0.52
GARNL3-211ENST00000460176 TSKSQ9UJT2 592 aa11.83□□□□□ -0.52
GARNL3-211ENST00000460176 PNMA2Q9UL42 364 aa11.83□□□□□ -0.52
GARNL3-211ENST00000460176 ZNFX1Q9P2E3 1918 aaKnown RBP11.83□□□□□ -0.52
GARNL3-211ENST00000460176 PLXNA1Q9UIW2 1896 aa11.83□□□□□ -0.52
GARNL3-211ENST00000460176 STXBP3O00186 592 aa11.82□□□□□ -0.52
GARNL3-211ENST00000460176 OPLAHO14841 1288 aa11.82□□□□□ -0.52
GARNL3-211ENST00000460176 ERCC3P19447 782 aa11.82□□□□□ -0.52
GARNL3-211ENST00000460176 CTGFP29279 349 aa11.82□□□□□ -0.52
GARNL3-211ENST00000460176 COPB2P35606 906 aa11.82□□□□□ -0.52
GARNL3-211ENST00000460176 CCNA1P78396 465 aa11.82□□□□□ -0.52
GARNL3-211ENST00000460176 LACTBP83111 547 aaPredicted RBP11.82□□□□□ -0.52
GARNL3-211ENST00000460176 CAP1Q01518 475 aa11.82□□□□□ -0.52
GARNL3-211ENST00000460176 SP3Q02447 781 aa11.82□□□□□ -0.52
GARNL3-211ENST00000460176 TRAF1Q13077 416 aa11.82□□□□□ -0.52
GARNL3-211ENST00000460176 TYW1BQ6NUM6 668 aa11.82□□□□□ -0.52
GARNL3-211ENST00000460176 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.82□□□□□ -0.52
GARNL3-211ENST00000460176 NCAPG2Q86XI2 1143 aa11.82□□□□□ -0.52
GARNL3-211ENST00000460176 CHST13Q8NET6 341 aa11.82□□□□□ -0.52
GARNL3-211ENST00000460176 TRERF1Q96PN7 1200 aa11.82□□□□□ -0.52
GARNL3-211ENST00000460176 MROH8Q9H579 483 aa11.82□□□□□ -0.52
GARNL3-211ENST00000460176 HOMER2Q9NSB8 354 aa11.82□□□□□ -0.52
GARNL3-211ENST00000460176 BARHL2Q9NY43 387 aa11.82□□□□□ -0.52
GARNL3-211ENST00000460176 PCDHA1Q9Y5I3 950 aa11.82□□□□□ -0.52
GARNL3-211ENST00000460176 hCG_1984214I3L0E3 225 aa11.81□□□□□ -0.52
GARNL3-211ENST00000460176 NFIBO00712 420 aa11.81□□□□□ -0.52
GARNL3-211ENST00000460176 FOXN1O15353 648 aa11.81□□□□□ -0.52
GARNL3-211ENST00000460176 HSPA1AP0DMV8 641 aaKnown RBP11.81□□□□□ -0.52
GARNL3-211ENST00000460176 HSPA1BP0DMV9 641 aaKnown RBP11.81□□□□□ -0.52
GARNL3-211ENST00000460176 MAPK4P31152 587 aa11.81□□□□□ -0.52
GARNL3-211ENST00000460176 HMGN5P82970 282 aaKnown RBP11.81□□□□□ -0.52
GARNL3-211ENST00000460176 PPP1R18Q6NYC8 613 aa11.81□□□□□ -0.52
GARNL3-211ENST00000460176 ZNF713Q8N859 430 aaPredicted RBP11.81□□□□□ -0.52
GARNL3-211ENST00000460176 ZNF296Q8WUU4 475 aaPredicted RBP11.81□□□□□ -0.52
GARNL3-211ENST00000460176 INTS4Q96HW7 963 aaKnown RBP11.81□□□□□ -0.52
GARNL3-211ENST00000460176 ALG1Q9BT22 464 aa11.81□□□□□ -0.52
GARNL3-211ENST00000460176 ARHGAP39Q9C0H5 1083 aa11.81□□□□□ -0.52
GARNL3-211ENST00000460176 ACAD9Q9H845 621 aa11.81□□□□□ -0.52
GARNL3-211ENST00000460176 VPS54Q9P1Q0 977 aa11.81□□□□□ -0.52
GARNL3-211ENST00000460176 FBXO40Q9UH90 709 aa11.81□□□□□ -0.52
GARNL3-211ENST00000460176 MRPL11Q9Y3B7 192 aaKnown RBP11.81□□□□□ -0.52
GARNL3-211ENST00000460176 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.81□□□□□ -0.52
GARNL3-211ENST00000460176 LRRC37A2A6NM11 1700 aa11.8□□□□□ -0.52
GARNL3-211ENST00000460176 FKTNO75072 461 aa11.8□□□□□ -0.52
GARNL3-211ENST00000460176 HSPA8P11142 646 aaKnown RBP11.8□□□□□ -0.52
GARNL3-211ENST00000460176 GHRHRQ02643 423 aa11.8□□□□□ -0.52
GARNL3-211ENST00000460176 WDR78Q5VTH9 848 aa11.8□□□□□ -0.52
GARNL3-211ENST00000460176 GPR142Q7Z601 462 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms