RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 KREMEN2Q8NCW0 462 aa7.76□□□□□ -1.17
CCDC50-203ENST00000460064 FRS2Q8WU20 508 aa7.76□□□□□ -1.17
CCDC50-203ENST00000460064 DCAF4Q8WV16 495 aa7.76□□□□□ -1.17
CCDC50-203ENST00000460064 C1orf159Q96HA4 380 aa7.76□□□□□ -1.17
CCDC50-203ENST00000460064 SPOCK3Q9BQ16 436 aa7.76□□□□□ -1.17
CCDC50-203ENST00000460064 SLC52A2Q9HAB3 445 aa7.76□□□□□ -1.17
CCDC50-203ENST00000460064 PCDH12Q9NPG4 1184 aa7.76□□□□□ -1.17
CCDC50-203ENST00000460064 NOP58Q9Y2X3 529 aaKnown RBP7.76□□□□□ -1.17
CCDC50-203ENST00000460064 TRAF6Q9Y4K3 522 aa7.76□□□□□ -1.17
CCDC50-203ENST00000460064 DYRK3O43781 588 aa7.75□□□□□ -1.17
CCDC50-203ENST00000460064 FKTNO75072 461 aa7.75□□□□□ -1.17
CCDC50-203ENST00000460064 ZNF205O95201 554 aa7.75□□□□□ -1.17
CCDC50-203ENST00000460064 PROCP04070 461 aa7.75□□□□□ -1.17
CCDC50-203ENST00000460064 SDSP20132 328 aa7.75□□□□□ -1.17
CCDC50-203ENST00000460064 ANAPC15P60006 121 aa7.75□□□□□ -1.17
CCDC50-203ENST00000460064 GAB4Q2WGN9 574 aa7.75□□□□□ -1.17
CCDC50-203ENST00000460064 EEF1DP3Q658K8 133 aa7.75□□□□□ -1.17
CCDC50-203ENST00000460064 TMPRSS7Q7RTY8 843 aa7.75□□□□□ -1.17
CCDC50-203ENST00000460064 KSR1Q8IVT5 923 aa7.75□□□□□ -1.17
CCDC50-203ENST00000460064 PPIL6Q8IXY8 311 aa7.75□□□□□ -1.17
CCDC50-203ENST00000460064 CDADC1Q9BWV3 514 aa7.75□□□□□ -1.17
CCDC50-203ENST00000460064 BRINP2Q9C0B6 783 aa7.75□□□□□ -1.17
CCDC50-203ENST00000460064 ATP13A1Q9HD20 1204 aa7.75□□□□□ -1.17
CCDC50-203ENST00000460064 AP5S1Q9NUS5 200 aa7.75□□□□□ -1.17
CCDC50-203ENST00000460064 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.74□□□□□ -1.17
CCDC50-203ENST00000460064 MEFVO15553 781 aaPredicted RBP7.74□□□□□ -1.17
CCDC50-203ENST00000460064 KCNQ2O43526 872 aa7.74□□□□□ -1.17
CCDC50-203ENST00000460064 APPP05067 770 aa7.74□□□□□ -1.17
CCDC50-203ENST00000460064 PLS3P13797 630 aa7.74□□□□□ -1.17
CCDC50-203ENST00000460064 AOC3Q16853 763 aa7.74□□□□□ -1.17
CCDC50-203ENST00000460064 RTP2Q5QGT7 225 aa7.74□□□□□ -1.17
CCDC50-203ENST00000460064 RCSD1Q6JBY9 416 aa7.74□□□□□ -1.17
CCDC50-203ENST00000460064 KCNT2Q6UVM3 1135 aa7.74□□□□□ -1.17
CCDC50-203ENST00000460064 RNF111Q6ZNA4 994 aa7.74□□□□□ -1.17
CCDC50-203ENST00000460064 MAMDC2Q7Z304 686 aaPredicted RBP7.74□□□□□ -1.17
CCDC50-203ENST00000460064 BRAPQ7Z569 592 aa7.74□□□□□ -1.17
CCDC50-203ENST00000460064 ASB11Q8WXH4 323 aa7.74□□□□□ -1.17
CCDC50-203ENST00000460064 HRASLS5Q96KN8 279 aa7.74□□□□□ -1.17
CCDC50-203ENST00000460064 MAGEB10Q96LZ2 347 aaPredicted RBP7.74□□□□□ -1.17
CCDC50-203ENST00000460064 TRIM39Q9HCM9 518 aa7.74□□□□□ -1.17
CCDC50-203ENST00000460064 CLEC1BQ9P126 229 aa7.74□□□□□ -1.17
CCDC50-203ENST00000460064 MAGEC2Q9UBF1 373 aaPredicted RBP7.74□□□□□ -1.17
CCDC50-203ENST00000460064 PCDHA11Q9Y5I1 949 aa7.74□□□□□ -1.17
CCDC50-203ENST00000460064 PITPNM2Q9BZ72 1349 aa7.74□□□□□ -1.17
CCDC50-203ENST00000460064 ASXL2Q76L83 1435 aa7.73□□□□□ -1.17
CCDC50-203ENST00000460064 A0A087X0B3 334 aa7.73□□□□□ -1.17
CCDC50-203ENST00000460064 PAMP19021 973 aa7.73□□□□□ -1.17
CCDC50-203ENST00000460064 RPL10P27635 214 aaKnown RBP7.73□□□□□ -1.17
CCDC50-203ENST00000460064 CNGA1P29973 690 aa7.73□□□□□ -1.17
CCDC50-203ENST00000460064 HOXA10P31260 410 aaPredicted RBP7.73□□□□□ -1.17
CCDC50-203ENST00000460064 EGR3Q06889 387 aa7.73□□□□□ -1.17
CCDC50-203ENST00000460064 KRT26Q7Z3Y9 468 aa7.73□□□□□ -1.17
CCDC50-203ENST00000460064 GSTCDQ8NEC7 633 aa7.73□□□□□ -1.17
CCDC50-203ENST00000460064 NPLOC4Q8TAT6 608 aa7.73□□□□□ -1.17
CCDC50-203ENST00000460064 INTS7Q9NVH2 962 aaKnown RBP7.73□□□□□ -1.17
CCDC50-203ENST00000460064 TMEFF2Q9UIK5 374 aaPredicted RBP7.73□□□□□ -1.17
CCDC50-203ENST00000460064 ARNTLO00327 626 aa7.72□□□□□ -1.17
CCDC50-203ENST00000460064 AQP7O14520 342 aa7.72□□□□□ -1.17
CCDC50-203ENST00000460064 PDE8AO60658 829 aa7.72□□□□□ -1.17
CCDC50-203ENST00000460064 ESR1P03372 595 aa7.72□□□□□ -1.17
CCDC50-203ENST00000460064 VIL1P09327 827 aaKnown RBP7.72□□□□□ -1.17
CCDC50-203ENST00000460064 AMPD3Q01432 767 aa7.72□□□□□ -1.17
CCDC50-203ENST00000460064 ACBD5Q5T8D3 534 aaPredicted RBP7.72□□□□□ -1.17
CCDC50-203ENST00000460064 E4F1Q66K89 784 aaPredicted RBP7.72□□□□□ -1.17
CCDC50-203ENST00000460064 IQCEQ6IPM2 695 aa7.72□□□□□ -1.17
CCDC50-203ENST00000460064 STYK1Q6J9G0 422 aa7.72□□□□□ -1.17
CCDC50-203ENST00000460064 FGD2Q7Z6J4 655 aa7.72□□□□□ -1.17
CCDC50-203ENST00000460064 LRRTM3Q86VH5 581 aa7.72□□□□□ -1.17
CCDC50-203ENST00000460064 NAT16Q8N8M0 369 aa7.72□□□□□ -1.17
CCDC50-203ENST00000460064 CHAC2Q8WUX2 184 aa7.72□□□□□ -1.17
CCDC50-203ENST00000460064 PHF20Q9BVI0 1012 aa7.72□□□□□ -1.17
CCDC50-203ENST00000460064 CAAP1Q9H8G2 361 aa7.72□□□□□ -1.17
CCDC50-203ENST00000460064 VAV3Q9UKW4 847 aa7.72□□□□□ -1.17
CCDC50-203ENST00000460064 PCDHA9Q9Y5H5 950 aa7.72□□□□□ -1.17
CCDC50-203ENST00000460064 NPHP3-ACAD11A0A0J9YXS1 232 aa7.71□□□□□ -1.18
CCDC50-203ENST00000460064 FGF10O15520 208 aaPredicted RBP7.71□□□□□ -1.18
CCDC50-203ENST00000460064 OPA1O60313 960 aa7.71□□□□□ -1.18
CCDC50-203ENST00000460064 DNAJC8O75937 253 aaPredicted RBP7.71□□□□□ -1.18
CCDC50-203ENST00000460064 CRTAMO95727 393 aa7.71□□□□□ -1.18
CCDC50-203ENST00000460064 TBC1D8O95759 1140 aa7.71□□□□□ -1.18
CCDC50-203ENST00000460064 TGFB1P01137 390 aa7.71□□□□□ -1.18
CCDC50-203ENST00000460064 ENDOUP21128 410 aaKnown RBP7.71□□□□□ -1.18
CCDC50-203ENST00000460064 PRKCQQ04759 706 aa7.71□□□□□ -1.18
CCDC50-203ENST00000460064 CT47A1Q5JQC4 288 aaPredicted RBP7.71□□□□□ -1.18
CCDC50-203ENST00000460064 ZPBP2Q6X784 338 aa7.71□□□□□ -1.18
CCDC50-203ENST00000460064 WAPLQ7Z5K2 1190 aa7.71□□□□□ -1.18
CCDC50-203ENST00000460064 THNSL2Q86YJ6 484 aa7.71□□□□□ -1.18
CCDC50-203ENST00000460064 IFNL3Q8IZI9 196 aa7.71□□□□□ -1.18
CCDC50-203ENST00000460064 UBR7Q8N806 425 aa7.71□□□□□ -1.18
CCDC50-203ENST00000460064 DDX1Q92499 740 aaKnown RBP7.71□□□□□ -1.18
CCDC50-203ENST00000460064 DIO2Q92813 273 aa7.71□□□□□ -1.18
CCDC50-203ENST00000460064 SYTL4Q96C24 671 aaPredicted RBP7.71□□□□□ -1.18
CCDC50-203ENST00000460064 SCLYQ96I15 445 aa7.71□□□□□ -1.18
CCDC50-203ENST00000460064 PTCHD1Q96NR3 888 aa7.71□□□□□ -1.18
CCDC50-203ENST00000460064 TARS2Q9BW92 718 aaKnown RBP7.71□□□□□ -1.18
CCDC50-203ENST00000460064 TNPO3Q9Y5L0 923 aaKnown RBP7.71□□□□□ -1.18
CCDC50-203ENST00000460064 TRBV23OR9-2A0A075B6M9 112 aa7.7□□□□□ -1.18
CCDC50-203ENST00000460064 ASLP04424 464 aa7.7□□□□□ -1.18
CCDC50-203ENST00000460064 LTBRP36941 435 aa7.7□□□□□ -1.18
CCDC50-203ENST00000460064 STAT3P40763 770 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms