RNA–Protein interactions for RNA: ENST00000459902.1

CKAP2-204, Transcript of cytoskeleton associated protein 2, humanhuman

TSL 2

Gene CKAP2, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-204ENST00000459902 SP110Q9HB58 689 aa9.38□□□□□ -0.91
CKAP2-204ENST00000459902 TNFRSF10DQ9UBN6 386 aa9.38□□□□□ -0.91
CKAP2-204ENST00000459902 DLX3O60479 287 aa9.37□□□□□ -0.91
CKAP2-204ENST00000459902 USP2O75604 605 aaPredicted RBP9.37□□□□□ -0.91
CKAP2-204ENST00000459902 PABPC1P11940 636 aaKnown RBP9.37□□□□□ -0.91
CKAP2-204ENST00000459902 KIR2DL1P43626 348 aaPredicted RBP9.37□□□□□ -0.91
CKAP2-204ENST00000459902 KIR2DL2P43627 348 aaPredicted RBP9.37□□□□□ -0.91
CKAP2-204ENST00000459902 KCNJ6P48051 423 aa9.37□□□□□ -0.91
CKAP2-204ENST00000459902 ANKS4BQ8N8V4 417 aa9.37□□□□□ -0.91
CKAP2-204ENST00000459902 TMEM145Q8NBT3 493 aa9.37□□□□□ -0.91
CKAP2-204ENST00000459902 KREMEN2Q8NCW0 462 aa9.37□□□□□ -0.91
CKAP2-204ENST00000459902 THAP3Q8WTV1 239 aaPredicted RBP9.37□□□□□ -0.91
CKAP2-204ENST00000459902 OSBP2Q969R2 916 aa9.37□□□□□ -0.91
CKAP2-204ENST00000459902 KANSL2Q9H9L4 492 aa9.37□□□□□ -0.91
CKAP2-204ENST00000459902 CLEC1BQ9P126 229 aa9.37□□□□□ -0.91
CKAP2-204ENST00000459902 NOTOA8MTQ0 251 aa9.36□□□□□ -0.91
CKAP2-204ENST00000459902 CPP00450 1065 aa9.36□□□□□ -0.91
CKAP2-204ENST00000459902 HPXP02790 462 aa9.36□□□□□ -0.91
CKAP2-204ENST00000459902 PLS3P13797 630 aa9.36□□□□□ -0.91
CKAP2-204ENST00000459902 LONRF2Q1L5Z9 754 aa9.36□□□□□ -0.91
CKAP2-204ENST00000459902 C2orf27AQ580R0 203 aa9.36□□□□□ -0.91
CKAP2-204ENST00000459902 DENND5AQ6IQ26 1287 aa9.36□□□□□ -0.91
CKAP2-204ENST00000459902 CYP2R1Q6VVX0 501 aa9.36□□□□□ -0.91
CKAP2-204ENST00000459902 NSMFQ6X4W1 530 aa9.36□□□□□ -0.91
CKAP2-204ENST00000459902 KSR1Q8IVT5 923 aa9.36□□□□□ -0.91
CKAP2-204ENST00000459902 NPLOC4Q8TAT6 608 aa9.36□□□□□ -0.91
CKAP2-204ENST00000459902 C1orf159Q96HA4 380 aa9.36□□□□□ -0.91
CKAP2-204ENST00000459902 ARNTLO00327 626 aa9.35□□□□□ -0.91
CKAP2-204ENST00000459902 TBC1D8O95759 1140 aa9.35□□□□□ -0.91
CKAP2-204ENST00000459902 CHRNEQ04844 493 aa9.35□□□□□ -0.91
CKAP2-204ENST00000459902 FAM209AQ5JX71 171 aa9.35□□□□□ -0.91
CKAP2-204ENST00000459902 SLC35F1Q5T1Q4 408 aa9.35□□□□□ -0.91
CKAP2-204ENST00000459902 HLA-DQA1Q5Y7H0 255 aa9.35□□□□□ -0.91
CKAP2-204ENST00000459902 GIMAP6Q6P9H5 292 aa9.35□□□□□ -0.91
CKAP2-204ENST00000459902 SPPL2CQ8IUH8 684 aa9.35□□□□□ -0.91
CKAP2-204ENST00000459902 OXR1Q8N573 874 aa9.35□□□□□ -0.91
CKAP2-204ENST00000459902 SH3TC2Q8TF17 1288 aa9.35□□□□□ -0.91
CKAP2-204ENST00000459902 KCTD13Q8WZ19 329 aa9.35□□□□□ -0.91
CKAP2-204ENST00000459902 RNPC3Q96LT9 517 aaKnown RBP9.35□□□□□ -0.91
CKAP2-204ENST00000459902 CDC6Q99741 560 aa9.35□□□□□ -0.91
CKAP2-204ENST00000459902 C19orf44Q9H6X5 657 aa9.35□□□□□ -0.91
CKAP2-204ENST00000459902 NPHP3-ACAD11A0A0J9YXS1 232 aa9.34□□□□□ -0.91
CKAP2-204ENST00000459902 FITM1A5D6W6 292 aa9.34□□□□□ -0.91
CKAP2-204ENST00000459902 PAMP19021 973 aa9.34□□□□□ -0.91
CKAP2-204ENST00000459902 L1CAMP32004 1257 aa9.34□□□□□ -0.91
CKAP2-204ENST00000459902 TRHRP34981 398 aaPredicted RBP9.34□□□□□ -0.91
CKAP2-204ENST00000459902 RTP1P59025 263 aa9.34□□□□□ -0.91
CKAP2-204ENST00000459902 MAP4K2Q12851 820 aa9.34□□□□□ -0.91
CKAP2-204ENST00000459902 CEP128Q6ZU80 1094 aa9.34□□□□□ -0.91
CKAP2-204ENST00000459902 SLCO6A1Q86UG4 719 aa9.34□□□□□ -0.91
CKAP2-204ENST00000459902 JAZF1Q86VZ6 243 aa9.34□□□□□ -0.91
CKAP2-204ENST00000459902 CPNE8Q86YQ8 564 aa9.34□□□□□ -0.91
CKAP2-204ENST00000459902 SCUBE1Q8IWY4 988 aa9.34□□□□□ -0.91
CKAP2-204ENST00000459902 FLAD1Q8NFF5 587 aa9.34□□□□□ -0.91
CKAP2-204ENST00000459902 EXOC2Q96KP1 924 aa9.34□□□□□ -0.91
CKAP2-204ENST00000459902 TMEFF2Q9UIK5 374 aaPredicted RBP9.34□□□□□ -0.91
CKAP2-204ENST00000459902 PTCH2Q9Y6C5 1203 aa9.34□□□□□ -0.91
CKAP2-204ENST00000459902 TRBV23-1A0A0A0MS06 115 aa9.33□□□□□ -0.92
CKAP2-204ENST00000459902 A0A1W2PQ45 241 aaPredicted RBP9.33□□□□□ -0.92
CKAP2-204ENST00000459902 A0A1W2PQY0 241 aa9.33□□□□□ -0.92
CKAP2-204ENST00000459902 NR0B2Q15466 257 aa9.33□□□□□ -0.92
CKAP2-204ENST00000459902 SLC14A2Q15849 920 aa9.33□□□□□ -0.92
CKAP2-204ENST00000459902 TIGD5Q53EQ6 642 aa9.33□□□□□ -0.92
CKAP2-204ENST00000459902 MYLIPQ8WY64 445 aa9.33□□□□□ -0.92
CKAP2-204ENST00000459902 JMJD8Q96S16 334 aa9.33□□□□□ -0.92
CKAP2-204ENST00000459902 NRDCO43847 1150 aa9.32□□□□□ -0.92
CKAP2-204ENST00000459902 PSPNO60542 156 aa9.32□□□□□ -0.92
CKAP2-204ENST00000459902 EFEMP2O95967 443 aa9.32□□□□□ -0.92
CKAP2-204ENST00000459902 SQSTM1Q13501 440 aa9.32□□□□□ -0.92
CKAP2-204ENST00000459902 LAPTM5Q13571 262 aa9.32□□□□□ -0.92
CKAP2-204ENST00000459902 HSF5Q4G112 596 aaPredicted RBP9.32□□□□□ -0.92
CKAP2-204ENST00000459902 FYB2Q5VWT5 728 aa9.32□□□□□ -0.92
CKAP2-204ENST00000459902 MBLAC2Q68D91 279 aa9.32□□□□□ -0.92
CKAP2-204ENST00000459902 ATG4DQ86TL0 474 aaPredicted RBP9.32□□□□□ -0.92
CKAP2-204ENST00000459902 CCDC103Q8IW40 242 aa9.32□□□□□ -0.92
CKAP2-204ENST00000459902 SLC26A8Q96RN1 970 aa9.32□□□□□ -0.92
CKAP2-204ENST00000459902 MMP19Q99542 508 aa9.32□□□□□ -0.92
CKAP2-204ENST00000459902 DHRS4Q9BTZ2 278 aa9.32□□□□□ -0.92
CKAP2-204ENST00000459902 MRPL42Q9Y6G3 142 aaKnown RBP9.32□□□□□ -0.92
CKAP2-204ENST00000459902 TRBV23OR9-2A0A075B6M9 112 aa9.31□□□□□ -0.92
CKAP2-204ENST00000459902 BLACEA4D250 179 aa9.31□□□□□ -0.92
CKAP2-204ENST00000459902 RAC2P15153 192 aa9.31□□□□□ -0.92
CKAP2-204ENST00000459902 AFMP43652 599 aa9.31□□□□□ -0.92
CKAP2-204ENST00000459902 NTRK3Q16288 839 aa9.31□□□□□ -0.92
CKAP2-204ENST00000459902 ZC3H12BQ5HYM0 836 aaKnown RBP9.31□□□□□ -0.92
CKAP2-204ENST00000459902 ACBD5Q5T8D3 534 aaPredicted RBP9.31□□□□□ -0.92
CKAP2-204ENST00000459902 JAMLQ86YT9 394 aa9.31□□□□□ -0.92
CKAP2-204ENST00000459902 PPIL6Q8IXY8 311 aa9.31□□□□□ -0.92
CKAP2-204ENST00000459902 ZSWIM2Q8NEG5 633 aa9.31□□□□□ -0.92
CKAP2-204ENST00000459902 KISS1RQ969F8 398 aaPredicted RBP9.31□□□□□ -0.92
CKAP2-204ENST00000459902 IPO9Q96P70 1041 aaKnown RBP9.31□□□□□ -0.92
CKAP2-204ENST00000459902 TBX22Q9Y458 520 aa9.31□□□□□ -0.92
CKAP2-204ENST00000459902 WTIPA6NIX2 430 aaPredicted RBP9.3□□□□□ -0.92
CKAP2-204ENST00000459902 MEFVO15553 781 aaPredicted RBP9.3□□□□□ -0.92
CKAP2-204ENST00000459902 KIR3DS1Q14943 382 aa9.3□□□□□ -0.92
CKAP2-204ENST00000459902 TESK1Q15569 626 aa9.3□□□□□ -0.92
CKAP2-204ENST00000459902 INF2Q27J81 1249 aa9.3□□□□□ -0.92
CKAP2-204ENST00000459902 TMEM67Q5HYA8 995 aa9.3□□□□□ -0.92
CKAP2-204ENST00000459902 E4F1Q66K89 784 aaPredicted RBP9.3□□□□□ -0.92
CKAP2-204ENST00000459902 ABHD4Q8TB40 342 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms