RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 AGBL1Q96MI9 1066 aa12.39□□□□□ -0.43
HDLBP-227ENST00000458564 NAPBQ9H115 298 aa12.39□□□□□ -0.43
HDLBP-227ENST00000458564 IL23AQ9NPF7 189 aa12.39□□□□□ -0.43
HDLBP-227ENST00000458564 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.39□□□□□ -0.43
HDLBP-227ENST00000458564 Q9Y3F1 56 aa12.39□□□□□ -0.43
HDLBP-227ENST00000458564 ERC2O15083 957 aa12.38□□□□□ -0.43
HDLBP-227ENST00000458564 FOXP2O15409 715 aa12.38□□□□□ -0.43
HDLBP-227ENST00000458564 PBX2P40425 430 aa12.38□□□□□ -0.43
HDLBP-227ENST00000458564 NOVP48745 357 aa12.38□□□□□ -0.43
HDLBP-227ENST00000458564 RAB30Q15771 203 aa12.38□□□□□ -0.43
HDLBP-227ENST00000458564 FSCN1Q16658 493 aaKnown RBP12.38□□□□□ -0.43
HDLBP-227ENST00000458564 CXCL17Q6UXB2 119 aa12.38□□□□□ -0.43
HDLBP-227ENST00000458564 MORC4Q8TE76 937 aa12.38□□□□□ -0.43
HDLBP-227ENST00000458564 TRERF1Q96PN7 1200 aa12.38□□□□□ -0.43
HDLBP-227ENST00000458564 SEC62Q99442 399 aaKnown RBP12.38□□□□□ -0.43
HDLBP-227ENST00000458564 GAS2L1Q99501 681 aaPredicted RBP12.38□□□□□ -0.43
HDLBP-227ENST00000458564 PPP1R12CQ9BZL4 782 aa12.38□□□□□ -0.43
HDLBP-227ENST00000458564 MTIF3Q9H2K0 278 aaKnown RBP12.38□□□□□ -0.43
HDLBP-227ENST00000458564 HIPK3Q9H422 1215 aa12.38□□□□□ -0.43
HDLBP-227ENST00000458564 CYP39A1Q9NYL5 469 aa12.38□□□□□ -0.43
HDLBP-227ENST00000458564 GRIN2DO15399 1336 aa12.37□□□□□ -0.43
HDLBP-227ENST00000458564 GRXCR1A8MXD5 290 aa12.37□□□□□ -0.43
HDLBP-227ENST00000458564 ACRP10323 421 aa12.37□□□□□ -0.43
HDLBP-227ENST00000458564 MCCP23508 829 aa12.37□□□□□ -0.43
HDLBP-227ENST00000458564 CYP2C18P33260 490 aa12.37□□□□□ -0.43
HDLBP-227ENST00000458564 BEX3Q00994 111 aa12.37□□□□□ -0.43
HDLBP-227ENST00000458564 IKQ13123 557 aaPredicted RBP12.37□□□□□ -0.43
HDLBP-227ENST00000458564 ITGA7Q13683 1181 aa12.37□□□□□ -0.43
HDLBP-227ENST00000458564 IQSEC1Q6DN90 963 aa12.37□□□□□ -0.43
HDLBP-227ENST00000458564 RCSD1Q6JBY9 416 aa12.37□□□□□ -0.43
HDLBP-227ENST00000458564 NCOR1O75376 2440 aa12.36□□□□□ -0.43
HDLBP-227ENST00000458564 LOC102724159A0A0B4J2E5 919 aa12.36□□□□□ -0.43
HDLBP-227ENST00000458564 ZEB2O60315 1214 aa12.36□□□□□ -0.43
HDLBP-227ENST00000458564 ALAS1P13196 640 aa12.36□□□□□ -0.43
HDLBP-227ENST00000458564 SMPD1P17405 629 aa12.36□□□□□ -0.43
HDLBP-227ENST00000458564 PWP2Q15269 919 aaKnown RBP12.36□□□□□ -0.43
HDLBP-227ENST00000458564 TAPT1Q6NXT6 567 aa12.36□□□□□ -0.43
HDLBP-227ENST00000458564 KCTD1Q719H9 257 aa12.36□□□□□ -0.43
HDLBP-227ENST00000458564 NOL8Q76FK4 1167 aaKnown RBP12.36□□□□□ -0.43
HDLBP-227ENST00000458564 ATXN2LQ8WWM7 1075 aaKnown RBP12.36□□□□□ -0.43
HDLBP-227ENST00000458564 FSD1Q9BTV5 496 aa12.36□□□□□ -0.43
HDLBP-227ENST00000458564 NOC4LQ9BVI4 516 aaKnown RBP12.36□□□□□ -0.43
HDLBP-227ENST00000458564 AP5M1Q9H0R1 490 aa12.36□□□□□ -0.43
HDLBP-227ENST00000458564 PRDM12Q9H4Q4 367 aa12.36□□□□□ -0.43
HDLBP-227ENST00000458564 VTA1Q9NP79 307 aa12.36□□□□□ -0.43
HDLBP-227ENST00000458564 IL17RBQ9NRM6 502 aa12.36□□□□□ -0.43
HDLBP-227ENST00000458564 CXXC1Q9P0U4 656 aaPredicted RBP12.36□□□□□ -0.43
HDLBP-227ENST00000458564 MSRAQ9UJ68 235 aa12.36□□□□□ -0.43
HDLBP-227ENST00000458564 ANAPC4Q9UJX5 808 aa12.36□□□□□ -0.43
HDLBP-227ENST00000458564 PRR12Q9ULL5 1215 aa12.36□□□□□ -0.43
HDLBP-227ENST00000458564 ISY1Q9ULR0 285 aaKnown RBP12.36□□□□□ -0.43
HDLBP-227ENST00000458564 STX8Q9UNK0 236 aa12.36□□□□□ -0.43
HDLBP-227ENST00000458564 TSPY2A6NKD2 308 aa12.35□□□□□ -0.43
HDLBP-227ENST00000458564 B4GALT4O60513 344 aa12.35□□□□□ -0.43
HDLBP-227ENST00000458564 FGBP02675 491 aa12.35□□□□□ -0.43
HDLBP-227ENST00000458564 ICAM1P05362 532 aa12.35□□□□□ -0.43
HDLBP-227ENST00000458564 FGRP09769 529 aa12.35□□□□□ -0.43
HDLBP-227ENST00000458564 MUM1L1Q5H9M0 696 aa12.35□□□□□ -0.43
HDLBP-227ENST00000458564 FBXO16Q8IX29 292 aaPredicted RBP12.35□□□□□ -0.43
HDLBP-227ENST00000458564 WNT8AQ9H1J5 351 aa12.35□□□□□ -0.43
HDLBP-227ENST00000458564 RANBP17Q9H2T7 1088 aaKnown RBP12.35□□□□□ -0.43
HDLBP-227ENST00000458564 PDGFCQ9NRA1 345 aa12.35□□□□□ -0.43
HDLBP-227ENST00000458564 THEGQ9P2T0 379 aa12.35□□□□□ -0.43
HDLBP-227ENST00000458564 CCPG1Q9ULG6 757 aa12.35□□□□□ -0.43
HDLBP-227ENST00000458564 LCTP09848 1927 aa12.35□□□□□ -0.43
HDLBP-227ENST00000458564 UMODL1Q5DID0 1318 aa12.35□□□□□ -0.43
HDLBP-227ENST00000458564 SALL3Q9BXA9 1300 aa12.35□□□□□ -0.43
HDLBP-227ENST00000458564 MYO9BQ13459 2157 aa12.35□□□□□ -0.43
HDLBP-227ENST00000458564 TNFRSF10AO00220 468 aa12.34□□□□□ -0.43
HDLBP-227ENST00000458564 DYNC1LI2O43237 492 aaPredicted RBP12.34□□□□□ -0.43
HDLBP-227ENST00000458564 ORC4O43929 436 aa12.34□□□□□ -0.43
HDLBP-227ENST00000458564 NMT2O60551 498 aa12.34□□□□□ -0.43
HDLBP-227ENST00000458564 MX1P20591 662 aa12.34□□□□□ -0.43
HDLBP-227ENST00000458564 ADGRE1Q14246 886 aa12.34□□□□□ -0.43
HDLBP-227ENST00000458564 DUSP28Q4G0W2 176 aa12.34□□□□□ -0.43
HDLBP-227ENST00000458564 BTNL9Q6UXG8 535 aa12.34□□□□□ -0.43
HDLBP-227ENST00000458564 RASGRP2Q7LDG7 609 aa12.34□□□□□ -0.43
HDLBP-227ENST00000458564 OTUD7AQ8TE49 926 aaPredicted RBP12.34□□□□□ -0.43
HDLBP-227ENST00000458564 DCAF4Q8WV16 495 aa12.34□□□□□ -0.43
HDLBP-227ENST00000458564 VWCEQ96DN2 955 aa12.34□□□□□ -0.43
HDLBP-227ENST00000458564 TRPV6Q9H1D0 765 aa12.34□□□□□ -0.43
HDLBP-227ENST00000458564 ALDH8A1Q9H2A2 487 aaPredicted RBP12.34□□□□□ -0.43
HDLBP-227ENST00000458564 TRANK1O15050 2925 aa12.34□□□□□ -0.43
HDLBP-227ENST00000458564 REV3LO60673 3130 aa12.33□□□□□ -0.44
HDLBP-227ENST00000458564 RBM47A0AV96 593 aaKnown RBP12.33□□□□□ -0.44
HDLBP-227ENST00000458564 PFKMP08237 780 aa12.33□□□□□ -0.44
HDLBP-227ENST00000458564 PTGS1P23219 599 aa12.33□□□□□ -0.44
HDLBP-227ENST00000458564 ALX1Q15699 326 aa12.33□□□□□ -0.44
HDLBP-227ENST00000458564 NSMFQ6X4W1 530 aa12.33□□□□□ -0.44
HDLBP-227ENST00000458564 EEPD1Q7L9B9 569 aa12.33□□□□□ -0.44
HDLBP-227ENST00000458564 OTOP2Q7RTS6 562 aa12.33□□□□□ -0.44
HDLBP-227ENST00000458564 RPUSD2Q8IZ73 545 aaKnown RBP12.33□□□□□ -0.44
HDLBP-227ENST00000458564 ASB2Q96Q27 587 aa12.33□□□□□ -0.44
HDLBP-227ENST00000458564 SLC28A3Q9HAS3 691 aa12.33□□□□□ -0.44
HDLBP-227ENST00000458564 ADD3Q9UEY8 706 aaKnown RBP12.33□□□□□ -0.44
HDLBP-227ENST00000458564 YBX2Q9Y2T7 364 aaKnown RBP12.33□□□□□ -0.44
HDLBP-227ENST00000458564 DDX49Q9Y6V7 483 aaKnown RBP12.33□□□□□ -0.44
HDLBP-227ENST00000458564 SUPT20HL2P0C7V6 817 aa12.32□□□□□ -0.44
HDLBP-227ENST00000458564 ALDH5A1P51649 535 aaPredicted RBP12.32□□□□□ -0.44
HDLBP-227ENST00000458564 CCL23P55773 120 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms