RNA–Protein interactions for RNA: ENST00000458362.5

CRAT-207, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 1 (best)

Gene CRAT, Length 2,253 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-207ENST00000458362 NEDD1Q8NHV4 660 aa23.17■■□□□ 1.3
CRAT-207ENST00000458362 LUC7L2Q9Y383 392 aaKnown RBP23.17■■□□□ 1.3
CRAT-207ENST00000458362 RASSF10A6NK89 507 aa23.16■■□□□ 1.3
CRAT-207ENST00000458362 RFC4P35249 363 aa23.16■■□□□ 1.3
CRAT-207ENST00000458362 PIP4K2BP78356 416 aa23.16■■□□□ 1.3
CRAT-207ENST00000458362 AMPD2Q01433 879 aa23.16■■□□□ 1.3
CRAT-207ENST00000458362 C15orf52Q6ZUT6 534 aaKnown RBP23.16■■□□□ 1.3
CRAT-207ENST00000458362 MSANTD4Q8NCY6 345 aa23.16■■□□□ 1.3
CRAT-207ENST00000458362 DHTKD1Q96HY7 919 aaPredicted RBP23.16■■□□□ 1.3
CRAT-207ENST00000458362 TRIM9Q9C026 710 aa23.16■■□□□ 1.3
CRAT-207ENST00000458362 VAT1LQ9HCJ6 419 aa23.16■■□□□ 1.3
CRAT-207ENST00000458362 ZCCHC17Q9NP64 241 aaKnown RBP23.16■■□□□ 1.3
CRAT-207ENST00000458362 MYO1AQ9UBC5 1043 aa23.16■■□□□ 1.3
CRAT-207ENST00000458362 MAGEC2Q9UBF1 373 aaPredicted RBP23.16■■□□□ 1.3
CRAT-207ENST00000458362 TFR2Q9UP52 801 aa23.16■■□□□ 1.3
CRAT-207ENST00000458362 GPR75-ASB3A0A0A6YYF3 556 aa23.16■■□□□ 1.3
CRAT-207ENST00000458362 OAS2P29728 719 aaKnown RBP23.16■■□□□ 1.3
CRAT-207ENST00000458362 KLK7P49862 253 aa23.16■■□□□ 1.3
CRAT-207ENST00000458362 HERVK_113P62684 666 aa23.16■■□□□ 1.3
CRAT-207ENST00000458362 SMC1AQ14683 1233 aaKnown RBP23.16■■□□□ 1.3
CRAT-207ENST00000458362 ANKRD40Q6AI12 368 aa23.16■■□□□ 1.3
CRAT-207ENST00000458362 CSGALNACT2Q8N6G5 542 aa23.16■■□□□ 1.3
CRAT-207ENST00000458362 CNBD1Q8NA66 436 aa23.16■■□□□ 1.3
CRAT-207ENST00000458362 AK8Q96MA6 479 aa23.16■■□□□ 1.3
CRAT-207ENST00000458362 MMTAG2Q9BU76 263 aaKnown RBP23.16■■□□□ 1.3
CRAT-207ENST00000458362 CUEDC2Q9H467 287 aa23.16■■□□□ 1.3
CRAT-207ENST00000458362 CD209Q9NNX6 404 aa23.16■■□□□ 1.3
CRAT-207ENST00000458362 GUCA1BQ9UMX6 200 aa23.16■■□□□ 1.3
CRAT-207ENST00000458362 SRGNP10124 158 aa23.15■■□□□ 1.3
CRAT-207ENST00000458362 FAM193AP78312 1265 aa23.15■■□□□ 1.3
CRAT-207ENST00000458362 PDE4DQ08499 809 aa23.15■■□□□ 1.3
CRAT-207ENST00000458362 STK4Q13043 487 aa23.15■■□□□ 1.3
CRAT-207ENST00000458362 P2RX5Q93086 422 aa23.15■■□□□ 1.3
CRAT-207ENST00000458362 CEP95Q96GE4 821 aa23.15■■□□□ 1.3
CRAT-207ENST00000458362 NGLY1Q96IV0 654 aa23.15■■□□□ 1.3
CRAT-207ENST00000458362 PIGSQ96S52 555 aa23.15■■□□□ 1.3
CRAT-207ENST00000458362 TUBGCP2Q9BSJ2 902 aa23.15■■□□□ 1.3
CRAT-207ENST00000458362 FCER1AP12319 257 aa23.15■■□□□ 1.3
CRAT-207ENST00000458362 TECP42680 631 aa23.15■■□□□ 1.3
CRAT-207ENST00000458362 NEK8Q86SG6 692 aa23.15■■□□□ 1.3
CRAT-207ENST00000458362 RRP36Q96EU6 259 aaKnown RBP23.15■■□□□ 1.3
CRAT-207ENST00000458362 C7orf25Q9BPX7 421 aa23.15■■□□□ 1.3
CRAT-207ENST00000458362 MAGEF1Q9HAY2 307 aa23.15■■□□□ 1.3
CRAT-207ENST00000458362 C6orf50Q9HD87 102 aa23.15■■□□□ 1.3
CRAT-207ENST00000458362 TMEM260Q9NX78 707 aa23.15■■□□□ 1.3
CRAT-207ENST00000458362 RAB21Q9UL25 225 aa23.15■■□□□ 1.3
CRAT-207ENST00000458362 ERICH4A6NGS2 130 aa23.14■■□□□ 1.29
CRAT-207ENST00000458362 UFL1O94874 794 aa23.14■■□□□ 1.29
CRAT-207ENST00000458362 CCNE1P24864 410 aa23.14■■□□□ 1.29
CRAT-207ENST00000458362 DNM2P50570 870 aa23.14■■□□□ 1.29
CRAT-207ENST00000458362 ASIC1P78348 528 aa23.14■■□□□ 1.29
CRAT-207ENST00000458362 SEMA3FQ13275 785 aa23.14■■□□□ 1.29
CRAT-207ENST00000458362 WHAMMP3Q1A5X7 153 aa23.14■■□□□ 1.29
CRAT-207ENST00000458362 NOC3LQ8WTT2 800 aaKnown RBP23.14■■□□□ 1.29
CRAT-207ENST00000458362 ZNF287Q9HBT7 754 aa23.14■■□□□ 1.29
CRAT-207ENST00000458362 EXOC1Q9NV70 894 aa23.14■■□□□ 1.29
CRAT-207ENST00000458362 BIN2Q9UBW5 565 aaPredicted RBP23.14■■□□□ 1.29
CRAT-207ENST00000458362 USP17L5A8MUK1 530 aa23.13■■□□□ 1.29
CRAT-207ENST00000458362 NKRFO15226 690 aaKnown RBP eCLIP23.13■■□□□ 1.29
CRAT-207ENST00000458362 CYP2C19P33261 490 aa23.13■■□□□ 1.29
CRAT-207ENST00000458362 RHBDL3P58872 404 aa23.13■■□□□ 1.29
CRAT-207ENST00000458362 TBCKQ8TEA7 893 aa23.13■■□□□ 1.29
CRAT-207ENST00000458362 HPS3Q969F9 1004 aa23.13■■□□□ 1.29
CRAT-207ENST00000458362 TTYH3Q9C0H2 523 aa23.13■■□□□ 1.29
CRAT-207ENST00000458362 UBA5Q9GZZ9 404 aa23.13■■□□□ 1.29
CRAT-207ENST00000458362 AGPAT5Q9NUQ2 364 aa23.13■■□□□ 1.29
CRAT-207ENST00000458362 RHOXF2BP0C7M4 288 aa23.13■■□□□ 1.29
CRAT-207ENST00000458362 TRAPPC3LQ5T215 181 aa23.13■■□□□ 1.29
CRAT-207ENST00000458362 POTEDQ86YR6 584 aa23.13■■□□□ 1.29
CRAT-207ENST00000458362 RHOXF2Q9BQY4 288 aa23.13■■□□□ 1.29
CRAT-207ENST00000458362 MYO6Q9UM54 1294 aa23.13■■□□□ 1.29
CRAT-207ENST00000458362 LY75O60449 1722 aa23.13■■□□□ 1.29
CRAT-207ENST00000458362 MAP2K7O14733 419 aa23.12■■□□□ 1.29
CRAT-207ENST00000458362 BEND6Q5SZJ8 279 aaPredicted RBP23.12■■□□□ 1.29
CRAT-207ENST00000458362 NCAPH2Q6IBW4 605 aa23.12■■□□□ 1.29
CRAT-207ENST00000458362 CNOT6LQ96LI5 555 aaKnown RBP23.12■■□□□ 1.29
CRAT-207ENST00000458362 ZKSCAN7Q9P0L1 754 aaPredicted RBP23.12■■□□□ 1.29
CRAT-207ENST00000458362 CTAGE15A4D2H0 777 aa23.12■■□□□ 1.29
CRAT-207ENST00000458362 CTAGE8P0CG41 777 aa23.12■■□□□ 1.29
CRAT-207ENST00000458362 GNA11P29992 359 aa23.12■■□□□ 1.29
CRAT-207ENST00000458362 PRR5LQ6MZQ0 368 aa23.12■■□□□ 1.29
CRAT-207ENST00000458362 CTAGE6Q86UF2 777 aa23.12■■□□□ 1.29
CRAT-207ENST00000458362 CTAGE4Q8IX94 777 aa23.12■■□□□ 1.29
CRAT-207ENST00000458362 NOA1Q8NC60 698 aaKnown RBP23.12■■□□□ 1.29
CRAT-207ENST00000458362 HNRNPLLQ8WVV9 542 aaKnown RBP23.12■■□□□ 1.29
CRAT-207ENST00000458362 POTEB2H3BUK9 544 aa23.11■■□□□ 1.29
CRAT-207ENST00000458362 IL1R1P14778 569 aa23.11■■□□□ 1.29
CRAT-207ENST00000458362 MEA1Q16626 185 aa23.11■■□□□ 1.29
CRAT-207ENST00000458362 MIIPQ5JXC2 388 aa23.11■■□□□ 1.29
CRAT-207ENST00000458362 SOGA3Q5TF21 947 aa23.11■■□□□ 1.29
CRAT-207ENST00000458362 FAM196AQ6ZSG2 479 aa23.11■■□□□ 1.29
CRAT-207ENST00000458362 SEC63Q9UGP8 760 aaKnown RBP23.11■■□□□ 1.29
CRAT-207ENST00000458362 H3BQF6 201 aa23.11■■□□□ 1.29
CRAT-207ENST00000458362 FNBP4Q8N3X1 1017 aaPredicted RBP23.11■■□□□ 1.29
CRAT-207ENST00000458362 KIAA0895Q8NCT3 520 aa23.11■■□□□ 1.29
CRAT-207ENST00000458362 RPGRQ92834 1020 aaKnown RBP23.11■■□□□ 1.29
CRAT-207ENST00000458362 HDAC6Q9UBN7 1215 aa23.11■■□□□ 1.29
CRAT-207ENST00000458362 FRMPD2Q68DX3 1309 aaPredicted RBP23.1■■□□□ 1.29
CRAT-207ENST00000458362 TBC1D8BQ0IIM8 1120 aa23.1■■□□□ 1.29
CRAT-207ENST00000458362 HAUS4Q9H6D7 363 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms