RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 TTC28Q96AY4 2481 aa17.14■□□□□ 0.33
UPF3AP2-201ENST00000457924 ADCY6O43306 1168 aa17.13■□□□□ 0.33
UPF3AP2-201ENST00000457924 ACRP10323 421 aa17.13■□□□□ 0.33
UPF3AP2-201ENST00000457924 RASIP1Q5U651 963 aa17.13■□□□□ 0.33
UPF3AP2-201ENST00000457924 GIMAP6Q6P9H5 292 aa17.13■□□□□ 0.33
UPF3AP2-201ENST00000457924 ZNF365Q70YC5 407 aa17.13■□□□□ 0.33
UPF3AP2-201ENST00000457924 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.13■□□□□ 0.33
UPF3AP2-201ENST00000457924 FAM126BQ8IXS8 530 aa17.13■□□□□ 0.33
UPF3AP2-201ENST00000457924 ATXN2LQ8WWM7 1075 aaKnown RBP17.13■□□□□ 0.33
UPF3AP2-201ENST00000457924 CHMP4BQ9H444 224 aaKnown RBP17.13■□□□□ 0.33
UPF3AP2-201ENST00000457924 PRDM12Q9H4Q4 367 aa17.13■□□□□ 0.33
UPF3AP2-201ENST00000457924 SLC38A10Q9HBR0 1119 aa17.13■□□□□ 0.33
UPF3AP2-201ENST00000457924 ZNF287Q9HBT7 754 aa17.13■□□□□ 0.33
UPF3AP2-201ENST00000457924 ZBTB40Q9NUA8 1239 aa17.13■□□□□ 0.33
UPF3AP2-201ENST00000457924 GSG1L2A8MUP6 293 aa17.12■□□□□ 0.33
UPF3AP2-201ENST00000457924 OAZ1P54368 228 aa17.12■□□□□ 0.33
UPF3AP2-201ENST00000457924 MFSD10Q14728 455 aa17.12■□□□□ 0.33
UPF3AP2-201ENST00000457924 RAB30Q15771 203 aa17.12■□□□□ 0.33
UPF3AP2-201ENST00000457924 AKNAD1Q5T1N1 836 aa17.12■□□□□ 0.33
UPF3AP2-201ENST00000457924 CCDC144CPQ8IYA2 1237 aa17.12■□□□□ 0.33
UPF3AP2-201ENST00000457924 ZNF444Q8N0Y2 327 aaPredicted RBP17.12■□□□□ 0.33
UPF3AP2-201ENST00000457924 FGD4Q96M96 766 aa17.12■□□□□ 0.33
UPF3AP2-201ENST00000457924 LRRCC1Q9C099 1032 aa17.12■□□□□ 0.33
UPF3AP2-201ENST00000457924 MTIF3Q9H2K0 278 aaKnown RBP17.12■□□□□ 0.33
UPF3AP2-201ENST00000457924 MSRAQ9UJ68 235 aa17.12■□□□□ 0.33
UPF3AP2-201ENST00000457924 COG6Q9Y2V7 657 aa17.12■□□□□ 0.33
UPF3AP2-201ENST00000457924 NOL8Q76FK4 1167 aaKnown RBP17.11■□□□□ 0.33
UPF3AP2-201ENST00000457924 MKL1Q969V6 931 aa17.11■□□□□ 0.33
UPF3AP2-201ENST00000457924 LARP6Q9BRS8 491 aaKnown RBP17.11■□□□□ 0.33
UPF3AP2-201ENST00000457924 IL23AQ9NPF7 189 aa17.11■□□□□ 0.33
UPF3AP2-201ENST00000457924 THEGQ9P2T0 379 aa17.11■□□□□ 0.33
UPF3AP2-201ENST00000457924 SYNPO2Q9UMS6 1093 aa17.11■□□□□ 0.33
UPF3AP2-201ENST00000457924 IGKV6D-41A0A0C4DH26 115 aa17.1■□□□□ 0.33
UPF3AP2-201ENST00000457924 TTLL1O95922 423 aa17.1■□□□□ 0.33
UPF3AP2-201ENST00000457924 CD4P01730 458 aa17.1■□□□□ 0.33
UPF3AP2-201ENST00000457924 FDX1P10109 184 aa17.1■□□□□ 0.33
UPF3AP2-201ENST00000457924 NKX3-2P78367 333 aa17.1■□□□□ 0.33
UPF3AP2-201ENST00000457924 FOXK1P85037 733 aa17.1■□□□□ 0.33
UPF3AP2-201ENST00000457924 TNFAIP2Q03169 654 aa17.1■□□□□ 0.33
UPF3AP2-201ENST00000457924 GMCL1P1Q8NEA9 526 aa17.1■□□□□ 0.33
UPF3AP2-201ENST00000457924 HERVK_113Q902F9 699 aa17.1■□□□□ 0.33
UPF3AP2-201ENST00000457924 CEP95Q96GE4 821 aa17.1■□□□□ 0.33
UPF3AP2-201ENST00000457924 HOMER2Q9NSB8 354 aa17.1■□□□□ 0.33
UPF3AP2-201ENST00000457924 MTMR4Q9NYA4 1195 aa17.1■□□□□ 0.33
UPF3AP2-201ENST00000457924 CTAGE5O15320 804 aa17.09■□□□□ 0.33
UPF3AP2-201ENST00000457924 PRDM1O75626 825 aa17.09■□□□□ 0.33
UPF3AP2-201ENST00000457924 CABYRO75952 493 aa17.09■□□□□ 0.33
UPF3AP2-201ENST00000457924 FGBP02675 491 aa17.09■□□□□ 0.33
UPF3AP2-201ENST00000457924 COL9A1P20849 921 aa17.09■□□□□ 0.33
UPF3AP2-201ENST00000457924 CYP2C18P33260 490 aa17.09■□□□□ 0.33
UPF3AP2-201ENST00000457924 TDO2P48775 406 aa17.09■□□□□ 0.33
UPF3AP2-201ENST00000457924 BEX3Q00994 111 aa17.09■□□□□ 0.33
UPF3AP2-201ENST00000457924 DSG2Q14126 1118 aa17.09■□□□□ 0.33
UPF3AP2-201ENST00000457924 SLFN13Q68D06 897 aa17.09■□□□□ 0.33
UPF3AP2-201ENST00000457924 LRRC47Q8N1G4 583 aaKnown RBP17.09■□□□□ 0.33
UPF3AP2-201ENST00000457924 ASB2Q96Q27 587 aa17.09■□□□□ 0.33
UPF3AP2-201ENST00000457924 KATNBL1Q9H079 304 aa17.09■□□□□ 0.33
UPF3AP2-201ENST00000457924 ACAD9Q9H845 621 aa17.09■□□□□ 0.33
UPF3AP2-201ENST00000457924 SLC28A3Q9HAS3 691 aa17.09■□□□□ 0.33
UPF3AP2-201ENST00000457924 ECHDC1Q9NTX5 307 aa17.09■□□□□ 0.33
UPF3AP2-201ENST00000457924 ISY1Q9ULR0 285 aaKnown RBP17.09■□□□□ 0.33
UPF3AP2-201ENST00000457924 GBF1Q92538 1859 aa17.09■□□□□ 0.33
UPF3AP2-201ENST00000457924 ZEB2O60315 1214 aa17.08■□□□□ 0.32
UPF3AP2-201ENST00000457924 APPP05067 770 aa17.08■□□□□ 0.32
UPF3AP2-201ENST00000457924 BMP3P12645 472 aa17.08■□□□□ 0.32
UPF3AP2-201ENST00000457924 GNAT2P19087 354 aa17.08■□□□□ 0.32
UPF3AP2-201ENST00000457924 IGFBP4P22692 258 aa17.08■□□□□ 0.32
UPF3AP2-201ENST00000457924 MRPS5P82675 430 aaKnown RBP17.08■□□□□ 0.32
UPF3AP2-201ENST00000457924 CNTN2Q02246 1040 aa17.08■□□□□ 0.32
UPF3AP2-201ENST00000457924 CCDC85BQ15834 202 aaPredicted RBP17.08■□□□□ 0.32
UPF3AP2-201ENST00000457924 CXCL17Q6UXB2 119 aa17.08■□□□□ 0.32
UPF3AP2-201ENST00000457924 KBTBD3Q8NAB2 608 aa17.08■□□□□ 0.32
UPF3AP2-201ENST00000457924 IL27Q8NEV9 243 aa17.08■□□□□ 0.32
UPF3AP2-201ENST00000457924 APPBP2Q92624 585 aa17.08■□□□□ 0.32
UPF3AP2-201ENST00000457924 OSBP2Q969R2 916 aa17.08■□□□□ 0.32
UPF3AP2-201ENST00000457924 HIPK3Q9H422 1215 aa17.08■□□□□ 0.32
UPF3AP2-201ENST00000457924 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.07■□□□□ 0.32
UPF3AP2-201ENST00000457924 ASB14A6NK59 587 aa17.07■□□□□ 0.32
UPF3AP2-201ENST00000457924 TMEM232C9JQI7 657 aa17.07■□□□□ 0.32
UPF3AP2-201ENST00000457924 RNF113AO15541 343 aaKnown RBP17.07■□□□□ 0.32
UPF3AP2-201ENST00000457924 GPAA1O43292 621 aa17.07■□□□□ 0.32
UPF3AP2-201ENST00000457924 SMARCA5O60264 1052 aaPredicted RBP17.07■□□□□ 0.32
UPF3AP2-201ENST00000457924 TSPY3P0CV98 308 aa17.07■□□□□ 0.32
UPF3AP2-201ENST00000457924 TSPY8P0CW00 308 aa17.07■□□□□ 0.32
UPF3AP2-201ENST00000457924 STAT2P52630 851 aa17.07■□□□□ 0.32
UPF3AP2-201ENST00000457924 ITGA7Q13683 1181 aa17.07■□□□□ 0.32
UPF3AP2-201ENST00000457924 ADGRE1Q14246 886 aa17.07■□□□□ 0.32
UPF3AP2-201ENST00000457924 TLK2Q86UE8 772 aa17.07■□□□□ 0.32
UPF3AP2-201ENST00000457924 FAM133AQ8N9E0 248 aa17.07■□□□□ 0.32
UPF3AP2-201ENST00000457924 SLC43A3Q8NBI5 491 aa17.07■□□□□ 0.32
UPF3AP2-201ENST00000457924 ADAMTS19Q8TE59 1207 aa17.07■□□□□ 0.32
UPF3AP2-201ENST00000457924 SEZ6LQ9BYH1 1024 aa17.07■□□□□ 0.32
UPF3AP2-201ENST00000457924 AP5M1Q9H0R1 490 aa17.07■□□□□ 0.32
UPF3AP2-201ENST00000457924 NKX2-4Q9H2Z4 354 aa17.07■□□□□ 0.32
UPF3AP2-201ENST00000457924 CXXC1Q9P0U4 656 aaPredicted RBP17.07■□□□□ 0.32
UPF3AP2-201ENST00000457924 ZFYP08048 801 aaPredicted RBP17.06■□□□□ 0.32
UPF3AP2-201ENST00000457924 IKQ13123 557 aaPredicted RBP17.06■□□□□ 0.32
UPF3AP2-201ENST00000457924 FSCN1Q16658 493 aaKnown RBP17.06■□□□□ 0.32
UPF3AP2-201ENST00000457924 TKFCQ3LXA3 575 aa17.06■□□□□ 0.32
UPF3AP2-201ENST00000457924 OTOP2Q7RTS6 562 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms