RNA–Protein interactions for RNA: ENST00000457109.5

PKP4-207, Transcript of plakophilin 4, humanhuman

TSL 3

Gene PKP4, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-207ENST00000457109 SOWAHBA6NEL2 793 aa10.37□□□□□ -0.75
PKP4-207ENST00000457109 HIP1O00291 1037 aa10.37□□□□□ -0.75
PKP4-207ENST00000457109 FOSL2P15408 326 aa10.37□□□□□ -0.75
PKP4-207ENST00000457109 SLC16A2P36021 539 aa10.37□□□□□ -0.75
PKP4-207ENST00000457109 CDK7P50613 346 aa10.37□□□□□ -0.75
PKP4-207ENST00000457109 BEX3Q00994 111 aa10.37□□□□□ -0.75
PKP4-207ENST00000457109 ITGA7Q13683 1181 aa10.37□□□□□ -0.75
PKP4-207ENST00000457109 VPS53Q5VIR6 699 aa10.37□□□□□ -0.75
PKP4-207ENST00000457109 CCSAPQ6IQ19 270 aaPredicted RBP10.37□□□□□ -0.75
PKP4-207ENST00000457109 B4GALNT3Q6L9W6 998 aa10.37□□□□□ -0.75
PKP4-207ENST00000457109 TLK2Q86UE8 772 aa10.37□□□□□ -0.75
PKP4-207ENST00000457109 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.37□□□□□ -0.756e-6■□□□□ 8.7
PKP4-207ENST00000457109 GUCD1Q96NT3 240 aa10.37□□□□□ -0.75
PKP4-207ENST00000457109 PPP1R12CQ9BZL4 782 aa10.37□□□□□ -0.75
PKP4-207ENST00000457109 LNPKQ9C0E8 428 aa10.37□□□□□ -0.75
PKP4-207ENST00000457109 VTA1Q9NP79 307 aa10.37□□□□□ -0.75
PKP4-207ENST00000457109 DIAPH3Q9NSV4 1193 aa10.37□□□□□ -0.75
PKP4-207ENST00000457109 CYP39A1Q9NYL5 469 aa10.37□□□□□ -0.75
PKP4-207ENST00000457109 Q9Y3F1 56 aa10.37□□□□□ -0.75
PKP4-207ENST00000457109 FRMPD2Q68DX3 1309 aaPredicted RBP10.36□□□□□ -0.75
PKP4-207ENST00000457109 RAD50Q92878 1312 aa10.36□□□□□ -0.75
PKP4-207ENST00000457109 LOC102724159A0A0B4J2E5 919 aa10.36□□□□□ -0.75
PKP4-207ENST00000457109 MYADML2A6NDP7 307 aa10.36□□□□□ -0.75
PKP4-207ENST00000457109 FGBP02675 491 aa10.36□□□□□ -0.75
PKP4-207ENST00000457109 SUPT20HL2P0C7V6 817 aa10.36□□□□□ -0.75
PKP4-207ENST00000457109 HSPD1P10809 573 aaKnown RBP10.36□□□□□ -0.75
PKP4-207ENST00000457109 ITGB8P26012 769 aa10.36□□□□□ -0.75
PKP4-207ENST00000457109 CALML3P27482 149 aa10.36□□□□□ -0.75
PKP4-207ENST00000457109 NT5C2P49902 561 aa10.36□□□□□ -0.75
PKP4-207ENST00000457109 HAND2P61296 217 aa10.36□□□□□ -0.75
PKP4-207ENST00000457109 PDE4DQ08499 809 aa10.36□□□□□ -0.75
PKP4-207ENST00000457109 BAATQ14032 418 aaPredicted RBP10.36□□□□□ -0.75
PKP4-207ENST00000457109 PWP2Q15269 919 aaKnown RBP10.36□□□□□ -0.75
PKP4-207ENST00000457109 MUM1L1Q5H9M0 696 aa10.36□□□□□ -0.75
PKP4-207ENST00000457109 AKNAD1Q5T1N1 836 aa10.36□□□□□ -0.75
PKP4-207ENST00000457109 GPATCH4Q5T3I0 446 aaKnown RBP10.36□□□□□ -0.75
PKP4-207ENST00000457109 PSRC1Q6PGN9 363 aaPredicted RBP10.36□□□□□ -0.75
PKP4-207ENST00000457109 CXCL17Q6UXB2 119 aa10.36□□□□□ -0.75
PKP4-207ENST00000457109 RNF207Q6ZRF8 634 aa10.36□□□□□ -0.75
PKP4-207ENST00000457109 IQCA1Q86XH1 822 aa10.36□□□□□ -0.75
PKP4-207ENST00000457109 RPUSD2Q8IZ73 545 aaKnown RBP10.36□□□□□ -0.75
PKP4-207ENST00000457109 MAFAQ8NHW3 353 aaPredicted RBP10.36□□□□□ -0.75
PKP4-207ENST00000457109 FAM227BQ96M60 508 aa10.36□□□□□ -0.75
PKP4-207ENST00000457109 TMEM47Q9BQJ4 181 aa10.36□□□□□ -0.75
PKP4-207ENST00000457109 POLR3EQ9NVU0 708 aa10.36□□□□□ -0.75
PKP4-207ENST00000457109 CTNNA3Q9UI47 895 aa10.36□□□□□ -0.75
PKP4-207ENST00000457109 MSRAQ9UJ68 235 aa10.36□□□□□ -0.75
PKP4-207ENST00000457109 ZNF536O15090 1300 aa10.35□□□□□ -0.75
PKP4-207ENST00000457109 CCDC171Q6TFL3 1326 aa10.35□□□□□ -0.75
PKP4-207ENST00000457109 BAZ2AQ9UIF9 1905 aaKnown RBP10.35□□□□□ -0.75
PKP4-207ENST00000457109 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.35□□□□□ -0.75
PKP4-207ENST00000457109 DHX16O60231 1041 aaKnown RBP10.35□□□□□ -0.75
PKP4-207ENST00000457109 FGRP09769 529 aa10.35□□□□□ -0.75
PKP4-207ENST00000457109 SMPD1P17405 629 aa10.35□□□□□ -0.75
PKP4-207ENST00000457109 SDSP20132 328 aa10.35□□□□□ -0.75
PKP4-207ENST00000457109 CPT1AP50416 773 aa10.35□□□□□ -0.75
PKP4-207ENST00000457109 NKX3-2P78367 333 aa10.35□□□□□ -0.75
PKP4-207ENST00000457109 NMIQ13287 307 aaPredicted RBP10.35□□□□□ -0.75
PKP4-207ENST00000457109 TTBK2Q6IQ55 1244 aa10.35□□□□□ -0.75
PKP4-207ENST00000457109 BTNL9Q6UXG8 535 aa10.35□□□□□ -0.75
PKP4-207ENST00000457109 MYLIPQ8WY64 445 aa10.35□□□□□ -0.75
PKP4-207ENST00000457109 TIFAQ96CG3 184 aa10.35□□□□□ -0.75
PKP4-207ENST00000457109 FGD4Q96M96 766 aa10.35□□□□□ -0.75
PKP4-207ENST00000457109 YTHDC1Q96MU7 727 aaKnown RBP10.35□□□□□ -0.75
PKP4-207ENST00000457109 GAS2L1Q99501 681 aaPredicted RBP10.35□□□□□ -0.75
PKP4-207ENST00000457109 WDR11Q9BZH6 1224 aa10.35□□□□□ -0.75
PKP4-207ENST00000457109 RANBP17Q9H2T7 1088 aaKnown RBP10.35□□□□□ -0.75
PKP4-207ENST00000457109 HIPK3Q9H422 1215 aa10.35□□□□□ -0.75
PKP4-207ENST00000457109 KAT14Q9H8E8 782 aa10.35□□□□□ -0.75
PKP4-207ENST00000457109 TBX21Q9UL17 535 aa10.35□□□□□ -0.75
PKP4-207ENST00000457109 GNEQ9Y223 722 aaKnown RBP10.35□□□□□ -0.75
PKP4-207ENST00000457109 A0A0G2JMZ2 1700 aa10.34□□□□□ -0.75
PKP4-207ENST00000457109 A0A0D9SFI3 127 aa10.34□□□□□ -0.75
PKP4-207ENST00000457109 NKRFO15226 690 aaKnown RBP eCLIP10.34□□□□□ -0.757e-8■□□□□ 10.2
PKP4-207ENST00000457109 KPNA6O60684 536 aa10.34□□□□□ -0.75
PKP4-207ENST00000457109 MYL3P08590 195 aa10.34□□□□□ -0.75
PKP4-207ENST00000457109 CSF2RAP15509 400 aa10.34□□□□□ -0.75
PKP4-207ENST00000457109 DNAJB2P25686 324 aa10.34□□□□□ -0.75
PKP4-207ENST00000457109 NOVP48745 357 aa10.34□□□□□ -0.75
PKP4-207ENST00000457109 ALDH5A1P51649 535 aaPredicted RBP10.34□□□□□ -0.75
PKP4-207ENST00000457109 EPHB4P54760 987 aa10.34□□□□□ -0.75
PKP4-207ENST00000457109 RAB30Q15771 203 aa10.34□□□□□ -0.75
PKP4-207ENST00000457109 ZNF365Q70YC5 407 aa10.34□□□□□ -0.75
PKP4-207ENST00000457109 CHD1LQ86WJ1 897 aa10.34□□□□□ -0.75
PKP4-207ENST00000457109 DGKHQ86XP1 1220 aa10.34□□□□□ -0.75
PKP4-207ENST00000457109 FBXO16Q8IX29 292 aaPredicted RBP10.34□□□□□ -0.75
PKP4-207ENST00000457109 FAM126BQ8IXS8 530 aa10.34□□□□□ -0.75
PKP4-207ENST00000457109 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.34□□□□□ -0.753e-6■■□□□ 12.4
PKP4-207ENST00000457109 ZNF576Q9H609 170 aa10.34□□□□□ -0.75
PKP4-207ENST00000457109 IL23AQ9NPF7 189 aa10.34□□□□□ -0.75
PKP4-207ENST00000457109 PDGFCQ9NRA1 345 aa10.34□□□□□ -0.75
PKP4-207ENST00000457109 ZMYM6O95789 1325 aa10.33□□□□□ -0.76
PKP4-207ENST00000457109 SALL3Q9BXA9 1300 aa10.33□□□□□ -0.76
PKP4-207ENST00000457109 ALPK3Q96L96 1907 aa10.33□□□□□ -0.76
PKP4-207ENST00000457109 ADCY6O43306 1168 aa10.33□□□□□ -0.76
PKP4-207ENST00000457109 ACRP10323 421 aa10.33□□□□□ -0.76
PKP4-207ENST00000457109 PDHBP11177 359 aa10.33□□□□□ -0.76
PKP4-207ENST00000457109 CYP2C18P33260 490 aa10.33□□□□□ -0.76
PKP4-207ENST00000457109 IRX5P78411 483 aaPredicted RBP10.33□□□□□ -0.76
PKP4-207ENST00000457109 ZNF543Q08ER8 600 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms