RNA–Protein interactions for RNA: ENST00000457023.1

CAPN7-205, Transcript of calpain 7, humanhuman

TSL 3

Gene CAPN7, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN7-205ENST00000457023 ICAM1P05362 532 aa29.75■■■□□ 2.35
CAPN7-205ENST00000457023 TMEM47Q9BQJ4 181 aa29.75■■■□□ 2.35
CAPN7-205ENST00000457023 RANBP17Q9H2T7 1088 aaKnown RBP29.75■■■□□ 2.35
CAPN7-205ENST00000457023 TOP1P11387 765 aaKnown RBP29.74■■■□□ 2.35
CAPN7-205ENST00000457023 TTBK2Q6IQ55 1244 aa29.74■■■□□ 2.35
CAPN7-205ENST00000457023 ZNF589Q86UQ0 364 aaPredicted RBP29.74■■■□□ 2.35
CAPN7-205ENST00000457023 CCPG1Q9ULG6 757 aa29.74■■■□□ 2.35
CAPN7-205ENST00000457023 A0A0U1RQG5 324 aaPredicted RBP29.73■■■□□ 2.35
CAPN7-205ENST00000457023 NMIQ13287 307 aaPredicted RBP29.73■■■□□ 2.35
CAPN7-205ENST00000457023 MORC4Q8TE76 937 aa29.73■■■□□ 2.35
CAPN7-205ENST00000457023 VTI1AQ96AJ9 217 aa29.73■■■□□ 2.35
CAPN7-205ENST00000457023 RNPC3Q96LT9 517 aaKnown RBP29.73■■■□□ 2.35
CAPN7-205ENST00000457023 CDX2Q99626 313 aaPredicted RBP29.73■■■□□ 2.35
CAPN7-205ENST00000457023 MTMR7Q9Y216 660 aa29.73■■■□□ 2.35
CAPN7-205ENST00000457023 CCDC96Q2M329 555 aa29.72■■■□□ 2.35
CAPN7-205ENST00000457023 RRP12Q5JTH9 1297 aaKnown RBP29.72■■■□□ 2.35
CAPN7-205ENST00000457023 IQSEC1Q6DN90 963 aa29.72■■■□□ 2.35
CAPN7-205ENST00000457023 MFSD5Q6N075 450 aa29.72■■■□□ 2.35
CAPN7-205ENST00000457023 TAPT1Q6NXT6 567 aa29.72■■■□□ 2.35
CAPN7-205ENST00000457023 SMC5Q8IY18 1101 aa29.72■■■□□ 2.35
CAPN7-205ENST00000457023 TTC14Q96N46 770 aa29.72■■■□□ 2.35
CAPN7-205ENST00000457023 LNPKQ9C0E8 428 aa29.72■■■□□ 2.35
CAPN7-205ENST00000457023 TTYH1Q9H313 450 aaPredicted RBP29.72■■■□□ 2.35
CAPN7-205ENST00000457023 TOMM22Q9NS69 142 aa29.72■■■□□ 2.35
CAPN7-205ENST00000457023 SLC16A2P36021 539 aa29.71■■■□□ 2.35
CAPN7-205ENST00000457023 BEX3Q00994 111 aa29.71■■■□□ 2.35
CAPN7-205ENST00000457023 FAM126BQ8IXS8 530 aa29.71■■■□□ 2.35
CAPN7-205ENST00000457023 SLC43A3Q8NBI5 491 aa29.71■■■□□ 2.35
CAPN7-205ENST00000457023 Q9Y3F1 56 aa29.71■■■□□ 2.35
CAPN7-205ENST00000457023 PCP11498 1178 aaKnown RBP29.7■■■□□ 2.35
CAPN7-205ENST00000457023 SMPD1P17405 629 aa29.7■■■□□ 2.35
CAPN7-205ENST00000457023 SYDE2Q5VT97 1194 aa29.7■■■□□ 2.35
CAPN7-205ENST00000457023 PDGFCQ9NRA1 345 aa29.7■■■□□ 2.35
CAPN7-205ENST00000457023 DDX49Q9Y6V7 483 aaKnown RBP29.7■■■□□ 2.35
CAPN7-205ENST00000457023 CCDC171Q6TFL3 1326 aa29.7■■■□□ 2.34
CAPN7-205ENST00000457023 TRIM6-TRIM34B2RNG4 842 aa29.69■■■□□ 2.34
CAPN7-205ENST00000457023 CD4P01730 458 aa29.69■■■□□ 2.34
CAPN7-205ENST00000457023 NSMFQ6X4W1 530 aa29.69■■■□□ 2.34
CAPN7-205ENST00000457023 NOL8Q76FK4 1167 aaKnown RBP29.69■■■□□ 2.34
CAPN7-205ENST00000457023 TLK2Q86UE8 772 aa29.69■■■□□ 2.34
CAPN7-205ENST00000457023 PURBQ96QR8 312 aaKnown RBP29.69■■■□□ 2.34
CAPN7-205ENST00000457023 RWDD1Q9H446 243 aaPredicted RBP29.69■■■□□ 2.34
CAPN7-205ENST00000457023 CABYRO75952 493 aa29.68■■■□□ 2.34
CAPN7-205ENST00000457023 SDSP20132 328 aa29.68■■■□□ 2.34
CAPN7-205ENST00000457023 HAND2P61296 217 aa29.68■■■□□ 2.34
CAPN7-205ENST00000457023 AKNAD1Q5T1N1 836 aa29.68■■■□□ 2.34
CAPN7-205ENST00000457023 C16orf59Q7L2K0 433 aa29.68■■■□□ 2.34
CAPN7-205ENST00000457023 RILPL2Q969X0 211 aa29.68■■■□□ 2.34
CAPN7-205ENST00000457023 OSBPL3Q9H4L5 887 aa29.68■■■□□ 2.34
CAPN7-205ENST00000457023 MCM3APO60318 1980 aa29.67■■■□□ 2.34
CAPN7-205ENST00000457023 TMEM265A0A087WTH1 108 aa29.67■■■□□ 2.34
CAPN7-205ENST00000457023 HSFX4A0A1B0GTS1 333 aaPredicted RBP29.67■■■□□ 2.34
CAPN7-205ENST00000457023 HSFX3A0A1B0GWH4 333 aaPredicted RBP29.67■■■□□ 2.34
CAPN7-205ENST00000457023 DYNC1LI2O43237 492 aaPredicted RBP29.67■■■□□ 2.34
CAPN7-205ENST00000457023 PDHBP11177 359 aa29.67■■■□□ 2.34
CAPN7-205ENST00000457023 BAATQ14032 418 aaPredicted RBP29.67■■■□□ 2.34
CAPN7-205ENST00000457023 FSCN1Q16658 493 aaKnown RBP29.67■■■□□ 2.34
CAPN7-205ENST00000457023 MFSD6Q6ZSS7 791 aa29.67■■■□□ 2.34
CAPN7-205ENST00000457023 AP5M1Q9H0R1 490 aa29.67■■■□□ 2.34
CAPN7-205ENST00000457023 VTA1Q9NP79 307 aa29.67■■■□□ 2.34
CAPN7-205ENST00000457023 GPCPD1Q9NPB8 672 aa29.67■■■□□ 2.34
CAPN7-205ENST00000457023 FRMPD2Q68DX3 1309 aaPredicted RBP29.67■■■□□ 2.34
CAPN7-205ENST00000457023 LOC102724159A0A0B4J2E5 919 aa29.66■■■□□ 2.34
CAPN7-205ENST00000457023 TLR3O15455 904 aaKnown RBP29.66■■■□□ 2.34
CAPN7-205ENST00000457023 SNHG28P0DPA3 235 aa29.66■■■□□ 2.34
CAPN7-205ENST00000457023 PWP2Q15269 919 aaKnown RBP29.66■■■□□ 2.34
CAPN7-205ENST00000457023 TMEM63BQ5T3F8 832 aa29.66■■■□□ 2.34
CAPN7-205ENST00000457023 CXCL17Q6UXB2 119 aa29.66■■■□□ 2.34
CAPN7-205ENST00000457023 EEPD1Q7L9B9 569 aa29.66■■■□□ 2.34
CAPN7-205ENST00000457023 PLEKHM2Q8IWE5 1019 aa29.66■■■□□ 2.34
CAPN7-205ENST00000457023 FBXO16Q8IX29 292 aaPredicted RBP29.66■■■□□ 2.34
CAPN7-205ENST00000457023 BUD13Q9BRD0 619 aaKnown RBP eCLIP29.66■■■□□ 2.341e-8■■□□□ 11.9
CAPN7-205ENST00000457023 SEZ6LQ9BYH1 1024 aa29.66■■■□□ 2.34
CAPN7-205ENST00000457023 NFIBO00712 420 aa29.65■■■□□ 2.34
CAPN7-205ENST00000457023 IGHDP01880 384 aa29.65■■■□□ 2.34
CAPN7-205ENST00000457023 PTGS1P23219 599 aa29.65■■■□□ 2.34
CAPN7-205ENST00000457023 MFAP1P55081 439 aaKnown RBP29.65■■■□□ 2.34
CAPN7-205ENST00000457023 PPIGQ13427 754 aaKnown RBP eCLIP29.65■■■□□ 2.341e-13■□□□□ 9
CAPN7-205ENST00000457023 B4GALNT3Q6L9W6 998 aa29.65■■■□□ 2.34
CAPN7-205ENST00000457023 CHD1LQ86WJ1 897 aa29.65■■■□□ 2.34
CAPN7-205ENST00000457023 CLEC4DQ8WXI8 215 aa29.65■■■□□ 2.34
CAPN7-205ENST00000457023 ADD3Q9UEY8 706 aaKnown RBP29.65■■■□□ 2.34
CAPN7-205ENST00000457023 PNMA2Q9UL42 364 aa29.65■■■□□ 2.34
CAPN7-205ENST00000457023 GRIN2DO15399 1336 aa29.65■■■□□ 2.34
CAPN7-205ENST00000457023 ZEB2O60315 1214 aa29.64■■■□□ 2.34
CAPN7-205ENST00000457023 NUCB1Q02818 461 aa29.64■■■□□ 2.34
CAPN7-205ENST00000457023 ZNF543Q08ER8 600 aa29.64■■■□□ 2.34
CAPN7-205ENST00000457023 TMEM240Q5SV17 173 aa29.64■■■□□ 2.34
CAPN7-205ENST00000457023 TBC1D10CQ8IV04 446 aa29.64■■■□□ 2.34
CAPN7-205ENST00000457023 TMEM199Q8N511 208 aa29.64■■■□□ 2.34
CAPN7-205ENST00000457023 CSF2RAP15509 400 aa29.63■■■□□ 2.33
CAPN7-205ENST00000457023 ALDH5A1P51649 535 aaPredicted RBP29.63■■■□□ 2.33
CAPN7-205ENST00000457023 ITGA7Q13683 1181 aa29.63■■■□□ 2.33
CAPN7-205ENST00000457023 RASIP1Q5U651 963 aa29.63■■■□□ 2.33
CAPN7-205ENST00000457023 KIAA1211Q6ZU35 1233 aa29.63■■■□□ 2.33
CAPN7-205ENST00000457023 PHF6Q8IWS0 365 aaKnown RBP eCLIP29.63■■■□□ 2.33
CAPN7-205ENST00000457023 RNF41Q9H4P4 317 aaPredicted RBP29.63■■■□□ 2.33
CAPN7-205ENST00000457023 DUSP28Q4G0W2 176 aa29.62■■■□□ 2.33
CAPN7-205ENST00000457023 DGKHQ86XP1 1220 aa29.62■■■□□ 2.33
CAPN7-205ENST00000457023 MYLIPQ8WY64 445 aa29.62■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms