RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 EPB41L4AQ9HCS5 686 aaPredicted RBP5.08□□□□□ -1.6
DEPDC1-202ENST00000456315 CROCCQ5TZA2 2017 aa5.07□□□□□ -1.6
DEPDC1-202ENST00000456315 LRRC37A3O60309 1634 aa5.07□□□□□ -1.6
DEPDC1-202ENST00000456315 TRAPPC3O43617 180 aa5.07□□□□□ -1.6
DEPDC1-202ENST00000456315 KLRC4O43908 158 aa5.07□□□□□ -1.6
DEPDC1-202ENST00000456315 KRT16P08779 473 aa5.07□□□□□ -1.6
DEPDC1-202ENST00000456315 GCFC2P16383 781 aaKnown RBP5.07□□□□□ -1.6
DEPDC1-202ENST00000456315 STK4Q13043 487 aa5.07□□□□□ -1.6
DEPDC1-202ENST00000456315 MEA1Q16626 185 aa5.07□□□□□ -1.6
DEPDC1-202ENST00000456315 CCNJLQ8IV13 435 aa5.07□□□□□ -1.6
DEPDC1-202ENST00000456315 FAM76AQ8TAV0 307 aa5.07□□□□□ -1.6
DEPDC1-202ENST00000456315 HMG20BQ9P0W2 317 aa5.07□□□□□ -1.6
DEPDC1-202ENST00000456315 BIN2Q9UBW5 565 aaPredicted RBP5.07□□□□□ -1.6
DEPDC1-202ENST00000456315 PNMA3Q9UL41 463 aa5.07□□□□□ -1.6
DEPDC1-202ENST00000456315 H7C1D1 291 aa5.07□□□□□ -1.6
DEPDC1-202ENST00000456315 PRKAB2O43741 272 aa5.07□□□□□ -1.6
DEPDC1-202ENST00000456315 GH1P01241 217 aa5.07□□□□□ -1.6
DEPDC1-202ENST00000456315 GYS1P13807 737 aa5.07□□□□□ -1.6
DEPDC1-202ENST00000456315 RPS6KA3P51812 740 aa5.07□□□□□ -1.6
DEPDC1-202ENST00000456315 ASTE1Q2TB18 679 aaPredicted RBP5.07□□□□□ -1.6
DEPDC1-202ENST00000456315 EAPPQ56P03 285 aaPredicted RBP5.07□□□□□ -1.6
DEPDC1-202ENST00000456315 HGSNATQ68CP4 663 aa5.07□□□□□ -1.6
DEPDC1-202ENST00000456315 NAT10Q9H0A0 1025 aaKnown RBP5.07□□□□□ -1.6
DEPDC1-202ENST00000456315 NPHP3-ACAD11A0A0J9YXS1 232 aa5.07□□□□□ -1.6
DEPDC1-202ENST00000456315 FOXO4P98177 505 aa5.07□□□□□ -1.6
DEPDC1-202ENST00000456315 ZNF844Q08AG5 666 aa5.07□□□□□ -1.6
DEPDC1-202ENST00000456315 PLS1Q14651 629 aa5.07□□□□□ -1.6
DEPDC1-202ENST00000456315 SPATA1Q5VX52 437 aa5.07□□□□□ -1.6
DEPDC1-202ENST00000456315 ANO7Q6IWH7 933 aa5.07□□□□□ -1.6
DEPDC1-202ENST00000456315 B4GALNT4Q76KP1 1039 aa5.07□□□□□ -1.6
DEPDC1-202ENST00000456315 CPNE8Q86YQ8 564 aa5.07□□□□□ -1.6
DEPDC1-202ENST00000456315 PAGR1Q9BTK6 254 aa5.07□□□□□ -1.6
DEPDC1-202ENST00000456315 FGFBP2Q9BYJ0 223 aa5.07□□□□□ -1.6
DEPDC1-202ENST00000456315 PCMTD2Q9NV79 361 aa5.07□□□□□ -1.6
DEPDC1-202ENST00000456315 RTCBQ9Y3I0 505 aaKnown RBP5.07□□□□□ -1.6
DEPDC1-202ENST00000456315 AFG3L2Q9Y4W6 797 aa5.07□□□□□ -1.6
DEPDC1-202ENST00000456315 MON2Q7Z3U7 1717 aa5.07□□□□□ -1.6
DEPDC1-202ENST00000456315 CYP27B1O15528 508 aa5.07□□□□□ -1.6
DEPDC1-202ENST00000456315 DIAPH2O60879 1101 aa5.07□□□□□ -1.6
DEPDC1-202ENST00000456315 SMNDC1O75940 238 aaKnown RBP eCLIP5.07□□□□□ -1.6
DEPDC1-202ENST00000456315 ZAP70P43403 619 aa5.07□□□□□ -1.6
DEPDC1-202ENST00000456315 NLRP6P59044 892 aa5.07□□□□□ -1.6
DEPDC1-202ENST00000456315 IFI35P80217 286 aaPredicted RBP5.07□□□□□ -1.6
DEPDC1-202ENST00000456315 PPFIA1Q13136 1202 aa5.07□□□□□ -1.6
DEPDC1-202ENST00000456315 ANKRD20A8PQ5CZ79 823 aa5.07□□□□□ -1.6
DEPDC1-202ENST00000456315 MIIPQ5JXC2 388 aa5.07□□□□□ -1.6
DEPDC1-202ENST00000456315 CCDC122Q5T0U0 273 aa5.07□□□□□ -1.6
DEPDC1-202ENST00000456315 SUPT20HQ8NEM7 779 aa5.07□□□□□ -1.6
DEPDC1-202ENST00000456315 CASKIN2Q8WXE0 1202 aa5.07□□□□□ -1.6
DEPDC1-202ENST00000456315 PAGE5Q96GU1 130 aa5.07□□□□□ -1.6
DEPDC1-202ENST00000456315 L3MBTL3Q96JM7 780 aaPredicted RBP5.07□□□□□ -1.6
DEPDC1-202ENST00000456315 CCDC43Q96MW1 224 aaKnown RBP5.07□□□□□ -1.6
DEPDC1-202ENST00000456315 NOD2Q9HC29 1040 aa5.07□□□□□ -1.6
DEPDC1-202ENST00000456315 WWC3Q9ULE0 1092 aa5.07□□□□□ -1.6
DEPDC1-202ENST00000456315 AMOTL2Q9Y2J4 779 aa5.07□□□□□ -1.6
DEPDC1-202ENST00000456315 A2ML1A8K2U0 1454 aa5.06□□□□□ -1.6
DEPDC1-202ENST00000456315 KIF1CO43896 1103 aaKnown RBP5.06□□□□□ -1.6
DEPDC1-202ENST00000456315 CHRNA2Q15822 529 aa5.06□□□□□ -1.6
DEPDC1-202ENST00000456315 GNPTABQ3T906 1256 aa5.06□□□□□ -1.6
DEPDC1-202ENST00000456315 CERKLQ49MI3 558 aaPredicted RBP5.06□□□□□ -1.6
DEPDC1-202ENST00000456315 HSP90B2PQ58FF3 399 aa5.06□□□□□ -1.6
DEPDC1-202ENST00000456315 PPP1R15BQ5SWA1 713 aa5.06□□□□□ -1.6
DEPDC1-202ENST00000456315 NLRP14Q86W24 1093 aa5.06□□□□□ -1.6
DEPDC1-202ENST00000456315 SH3RF3Q8TEJ3 882 aaPredicted RBP5.06□□□□□ -1.6
DEPDC1-202ENST00000456315 RAPGEF5Q92565 580 aa5.06□□□□□ -1.6
DEPDC1-202ENST00000456315 YIPF3Q9GZM5 350 aa5.06□□□□□ -1.6
DEPDC1-202ENST00000456315 EPN3Q9H201 632 aa5.06□□□□□ -1.6
DEPDC1-202ENST00000456315 IKZF4Q9H2S9 585 aa5.06□□□□□ -1.6
DEPDC1-202ENST00000456315 LRWD1Q9UFC0 647 aa5.06□□□□□ -1.6
DEPDC1-202ENST00000456315 BAIAP2L1Q9UHR4 511 aa5.06□□□□□ -1.6
DEPDC1-202ENST00000456315 ECM29Q5VYK3 1845 aa5.06□□□□□ -1.6
DEPDC1-202ENST00000456315 KIF5CO60282 957 aa5.06□□□□□ -1.6
DEPDC1-202ENST00000456315 EPB41P11171 864 aaKnown RBP5.06□□□□□ -1.6
DEPDC1-202ENST00000456315 DRD4P21917 467 aa5.06□□□□□ -1.6
DEPDC1-202ENST00000456315 KLRC1P26715 233 aa5.06□□□□□ -1.6
DEPDC1-202ENST00000456315 MDH1P40925 334 aaKnown RBP5.06□□□□□ -1.6
DEPDC1-202ENST00000456315 ZNF268Q14587 947 aaPredicted RBP5.06□□□□□ -1.6
DEPDC1-202ENST00000456315 CRYMQ14894 314 aa5.06□□□□□ -1.6
DEPDC1-202ENST00000456315 RNF220Q5VTB9 566 aa5.06□□□□□ -1.6
DEPDC1-202ENST00000456315 UCMAQ8WVF2 138 aa5.06□□□□□ -1.6
DEPDC1-202ENST00000456315 SCLT1Q96NL6 688 aa5.06□□□□□ -1.6
DEPDC1-202ENST00000456315 PLIN2Q99541 437 aa5.06□□□□□ -1.6
DEPDC1-202ENST00000456315 LY9Q9HBG7 655 aa5.06□□□□□ -1.6
DEPDC1-202ENST00000456315 EPB41L5Q9HCM4 733 aa5.06□□□□□ -1.6
DEPDC1-202ENST00000456315 IRAK4Q9NWZ3 460 aa5.06□□□□□ -1.6
DEPDC1-202ENST00000456315 MYH11P35749 1972 aa5.06□□□□□ -1.6
DEPDC1-202ENST00000456315 KDM6AO15550 1401 aaPredicted RBP5.06□□□□□ -1.6
DEPDC1-202ENST00000456315 N4BP3O15049 544 aa5.06□□□□□ -1.6
DEPDC1-202ENST00000456315 MOCS3O95396 460 aa5.06□□□□□ -1.6
DEPDC1-202ENST00000456315 TPM1P09493 284 aa5.06□□□□□ -1.6
DEPDC1-202ENST00000456315 AMPHP49418 695 aa5.06□□□□□ -1.6
DEPDC1-202ENST00000456315 ADCY2Q08462 1091 aa5.06□□□□□ -1.6
DEPDC1-202ENST00000456315 CGB2Q6NT52 195 aa5.06□□□□□ -1.6
DEPDC1-202ENST00000456315 TTI2Q6NXR4 508 aa5.06□□□□□ -1.6
DEPDC1-202ENST00000456315 YTHDF3Q7Z739 585 aaKnown RBP5.06□□□□□ -1.6
DEPDC1-202ENST00000456315 NOSTRINQ8IVI9 506 aa5.06□□□□□ -1.6
DEPDC1-202ENST00000456315 FITM2Q8N6M3 262 aa5.06□□□□□ -1.6
DEPDC1-202ENST00000456315 MLKLQ8NB16 471 aa5.06□□□□□ -1.6
DEPDC1-202ENST00000456315 ATL2Q8NHH9 583 aa5.06□□□□□ -1.6
DEPDC1-202ENST00000456315 RIN3Q8TB24 985 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms