RNA–Protein interactions for RNA: ENST00000455768.6

YIPF3-204, Transcript of Yip1 domain family member 3, humanhuman

TSL 5

Gene YIPF3, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-204ENST00000455768 TKFCQ3LXA3 575 aa23.97■■□□□ 1.43
YIPF3-204ENST00000455768 PPP4R3BQ5MIZ7 849 aa23.97■■□□□ 1.43
YIPF3-204ENST00000455768 PRUNE2Q8WUY3 3088 aa23.97■■□□□ 1.43
YIPF3-204ENST00000455768 PDGFCQ9NRA1 345 aa23.97■■□□□ 1.43
YIPF3-204ENST00000455768 CYP39A1Q9NYL5 469 aa23.97■■□□□ 1.43
YIPF3-204ENST00000455768 ZBTB47Q9UFB7 747 aaPredicted RBP23.97■■□□□ 1.43
YIPF3-204ENST00000455768 GNEQ9Y223 722 aaKnown RBP23.97■■□□□ 1.43
YIPF3-204ENST00000455768 TIMP1P01033 207 aa23.96■■□□□ 1.43
YIPF3-204ENST00000455768 TNFAIP2Q03169 654 aa23.96■■□□□ 1.43
YIPF3-204ENST00000455768 NMIQ13287 307 aaPredicted RBP23.96■■□□□ 1.43
YIPF3-204ENST00000455768 CCDC96Q2M329 555 aa23.96■■□□□ 1.43
YIPF3-204ENST00000455768 MCMDC2Q4G0Z9 681 aa23.96■■□□□ 1.43
YIPF3-204ENST00000455768 RRP12Q5JTH9 1297 aaKnown RBP23.96■■□□□ 1.43
YIPF3-204ENST00000455768 LNPKQ9C0E8 428 aa23.96■■□□□ 1.43
YIPF3-204ENST00000455768 SPC25Q9HBM1 224 aa23.96■■□□□ 1.43
YIPF3-204ENST00000455768 CCPG1Q9ULG6 757 aa23.96■■□□□ 1.43
YIPF3-204ENST00000455768 LCTP09848 1927 aa23.96■■□□□ 1.43
YIPF3-204ENST00000455768 ARVCFO00192 962 aa23.95■■□□□ 1.42
YIPF3-204ENST00000455768 HSPD1P10809 573 aaKnown RBP23.95■■□□□ 1.42
YIPF3-204ENST00000455768 C16orf59Q7L2K0 433 aa23.95■■□□□ 1.42
YIPF3-204ENST00000455768 EEPD1Q7L9B9 569 aa23.95■■□□□ 1.42
YIPF3-204ENST00000455768 FAM126BQ8IXS8 530 aa23.95■■□□□ 1.42
YIPF3-204ENST00000455768 DCAF4Q8WV16 495 aa23.95■■□□□ 1.42
YIPF3-204ENST00000455768 VTI1AQ96AJ9 217 aa23.95■■□□□ 1.42
YIPF3-204ENST00000455768 TMEM47Q9BQJ4 181 aa23.95■■□□□ 1.42
YIPF3-204ENST00000455768 RANBP17Q9H2T7 1088 aaKnown RBP23.95■■□□□ 1.42
YIPF3-204ENST00000455768 TOMM22Q9NS69 142 aa23.95■■□□□ 1.42
YIPF3-204ENST00000455768 FRMPD2Q68DX3 1309 aaPredicted RBP23.94■■□□□ 1.42
YIPF3-204ENST00000455768 A0A0U1RQG5 324 aaPredicted RBP23.94■■□□□ 1.42
YIPF3-204ENST00000455768 ASB14A6NK59 587 aa23.94■■□□□ 1.42
YIPF3-204ENST00000455768 ICAM1P05362 532 aa23.94■■□□□ 1.42
YIPF3-204ENST00000455768 SMPD1P17405 629 aa23.94■■□□□ 1.42
YIPF3-204ENST00000455768 HAND2P61296 217 aa23.94■■□□□ 1.42
YIPF3-204ENST00000455768 TAPT1Q6NXT6 567 aa23.94■■□□□ 1.42
YIPF3-204ENST00000455768 CXCL17Q6UXB2 119 aa23.94■■□□□ 1.42
YIPF3-204ENST00000455768 NSMFQ6X4W1 530 aa23.94■■□□□ 1.42
YIPF3-204ENST00000455768 NOL8Q76FK4 1167 aaKnown RBP23.94■■□□□ 1.42
YIPF3-204ENST00000455768 FBXO16Q8IX29 292 aaPredicted RBP23.94■■□□□ 1.42
YIPF3-204ENST00000455768 MFSD5Q6N075 450 aa23.93■■□□□ 1.42
YIPF3-204ENST00000455768 BTNL9Q6UXG8 535 aa23.93■■□□□ 1.42
YIPF3-204ENST00000455768 TLK2Q86UE8 772 aa23.93■■□□□ 1.42
YIPF3-204ENST00000455768 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.93■■□□□ 1.42
YIPF3-204ENST00000455768 MYLIPQ8WY64 445 aa23.93■■□□□ 1.42
YIPF3-204ENST00000455768 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.93■■□□□ 1.422e-9■■■■□ 22.7
YIPF3-204ENST00000455768 GPCPD1Q9NPB8 672 aa23.93■■□□□ 1.42
YIPF3-204ENST00000455768 GRIN2DO15399 1336 aa23.92■■□□□ 1.42
YIPF3-204ENST00000455768 MROH7Q68CQ1 1323 aa23.92■■□□□ 1.42
YIPF3-204ENST00000455768 NFIBO00712 420 aa23.92■■□□□ 1.42
YIPF3-204ENST00000455768 TOP1P11387 765 aaKnown RBP23.92■■□□□ 1.42
YIPF3-204ENST00000455768 SYDE2Q5VT97 1194 aa23.92■■□□□ 1.42
YIPF3-204ENST00000455768 TBC1D10CQ8IV04 446 aa23.92■■□□□ 1.42
YIPF3-204ENST00000455768 TCP11L1Q9NUJ3 509 aa23.92■■□□□ 1.42
YIPF3-204ENST00000455768 VCANP13611 3396 aa23.92■■□□□ 1.42
YIPF3-204ENST00000455768 CD4P01730 458 aa23.91■■□□□ 1.42
YIPF3-204ENST00000455768 CSF2RAP15509 400 aa23.91■■□□□ 1.42
YIPF3-204ENST00000455768 BAATQ14032 418 aaPredicted RBP23.91■■□□□ 1.42
YIPF3-204ENST00000455768 FSCN1Q16658 493 aaKnown RBP23.91■■□□□ 1.42
YIPF3-204ENST00000455768 SLC43A3Q8NBI5 491 aa23.91■■□□□ 1.42
YIPF3-204ENST00000455768 MORC4Q8TE76 937 aa23.91■■□□□ 1.42
YIPF3-204ENST00000455768 PPP1R12CQ9BZL4 782 aa23.91■■□□□ 1.42
YIPF3-204ENST00000455768 ZMYM6O95789 1325 aa23.9■■□□□ 1.42
YIPF3-204ENST00000455768 CCDC171Q6TFL3 1326 aa23.9■■□□□ 1.42
YIPF3-204ENST00000455768 DYNC1LI2O43237 492 aaPredicted RBP23.9■■□□□ 1.42
YIPF3-204ENST00000455768 PDHBP11177 359 aa23.9■■□□□ 1.42
YIPF3-204ENST00000455768 TMEM240Q5SV17 173 aa23.9■■□□□ 1.42
YIPF3-204ENST00000455768 SMC5Q8IY18 1101 aa23.9■■□□□ 1.42
YIPF3-204ENST00000455768 TRIM6-TRIM34B2RNG4 842 aa23.89■■□□□ 1.41
YIPF3-204ENST00000455768 ACRP10323 421 aa23.89■■□□□ 1.41
YIPF3-204ENST00000455768 CYP2C18P33260 490 aa23.89■■□□□ 1.41
YIPF3-204ENST00000455768 B4GALNT3Q6L9W6 998 aa23.89■■□□□ 1.41
YIPF3-204ENST00000455768 MAFAQ8NHW3 353 aaPredicted RBP23.89■■□□□ 1.41
YIPF3-204ENST00000455768 CLEC4DQ8WXI8 215 aa23.89■■□□□ 1.41
YIPF3-204ENST00000455768 RILPL2Q969X0 211 aa23.89■■□□□ 1.41
YIPF3-204ENST00000455768 COL25A1Q9BXS0 654 aaPredicted RBP23.89■■□□□ 1.41
YIPF3-204ENST00000455768 UMODL1Q5DID0 1318 aa23.88■■□□□ 1.41
YIPF3-204ENST00000455768 DNAJB2P25686 324 aa23.88■■□□□ 1.41
YIPF3-204ENST00000455768 AKNAD1Q5T1N1 836 aa23.88■■□□□ 1.41
YIPF3-204ENST00000455768 RASIP1Q5U651 963 aa23.88■■□□□ 1.41
YIPF3-204ENST00000455768 IQSEC1Q6DN90 963 aa23.88■■□□□ 1.41
YIPF3-204ENST00000455768 SLC30A10Q6XR72 485 aa23.88■■□□□ 1.41
YIPF3-204ENST00000455768 TICAM2Q86XR7 235 aa23.88■■□□□ 1.41
YIPF3-204ENST00000455768 AP5M1Q9H0R1 490 aa23.88■■□□□ 1.41
YIPF3-204ENST00000455768 NEDD4P46934 1319 aa23.87■■□□□ 1.41
YIPF3-204ENST00000455768 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.87■■□□□ 1.41
YIPF3-204ENST00000455768 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.87■■□□□ 1.41
YIPF3-204ENST00000455768 GRXCR1A8MXD5 290 aa23.87■■□□□ 1.41
YIPF3-204ENST00000455768 IGHDP01880 384 aa23.87■■□□□ 1.41
YIPF3-204ENST00000455768 SDSP20132 328 aa23.87■■□□□ 1.41
YIPF3-204ENST00000455768 ALDH5A1P51649 535 aaPredicted RBP23.87■■□□□ 1.41
YIPF3-204ENST00000455768 PSMC6P62333 389 aa23.87■■□□□ 1.41
YIPF3-204ENST00000455768 ZNF543Q08ER8 600 aa23.87■■□□□ 1.41
YIPF3-204ENST00000455768 PPIGQ13427 754 aaKnown RBP eCLIP23.87■■□□□ 1.413e-7■■□□□ 12.4
YIPF3-204ENST00000455768 ITGA7Q13683 1181 aa23.87■■□□□ 1.41
YIPF3-204ENST00000455768 GRIN2CQ14957 1233 aa23.87■■□□□ 1.41
YIPF3-204ENST00000455768 PLEKHM2Q8IWE5 1019 aa23.87■■□□□ 1.41
YIPF3-204ENST00000455768 VTA1Q9NP79 307 aa23.87■■□□□ 1.41
YIPF3-204ENST00000455768 CHD9Q3L8U1 2897 aa23.86■■□□□ 1.41
YIPF3-204ENST00000455768 TMEM265A0A087WTH1 108 aa23.86■■□□□ 1.41
YIPF3-204ENST00000455768 TLR3O15455 904 aaKnown RBP23.86■■□□□ 1.41
YIPF3-204ENST00000455768 SNHG28P0DPA3 235 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms