RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 A1CFQ9NQ94 594 aaKnown RBP27.72■■■□□ 2.03
PTPRA-208ENST00000455631 RNF146Q9NTX7 359 aa27.72■■■□□ 2.03
PTPRA-208ENST00000455631 COG6Q9Y2V7 657 aa27.72■■■□□ 2.03
PTPRA-208ENST00000455631 SOWAHBA6NEL2 793 aa27.71■■■□□ 2.03
PTPRA-208ENST00000455631 ASB14A6NK59 587 aa27.71■■■□□ 2.03
PTPRA-208ENST00000455631 GSG1L2A8MUP6 293 aa27.71■■■□□ 2.03
PTPRA-208ENST00000455631 DYNC1LI2O43237 492 aaPredicted RBP27.71■■■□□ 2.03
PTPRA-208ENST00000455631 PRDM1O75626 825 aa27.71■■■□□ 2.03
PTPRA-208ENST00000455631 ATP2A2P16615 1042 aaKnown RBP27.71■■■□□ 2.03
PTPRA-208ENST00000455631 SMPD1P17405 629 aa27.71■■■□□ 2.03
PTPRA-208ENST00000455631 ZNF444Q8N0Y2 327 aaPredicted RBP27.71■■■□□ 2.03
PTPRA-208ENST00000455631 GMCL1P1Q8NEA9 526 aa27.71■■■□□ 2.03
PTPRA-208ENST00000455631 SEZ6LQ9BYH1 1024 aa27.71■■■□□ 2.03
PTPRA-208ENST00000455631 TTLL1O95922 423 aa27.7■■■□□ 2.02
PTPRA-208ENST00000455631 BMP3P12645 472 aa27.7■■■□□ 2.02
PTPRA-208ENST00000455631 SLFN13Q68D06 897 aa27.7■■■□□ 2.02
PTPRA-208ENST00000455631 GIMAP6Q6P9H5 292 aa27.7■■■□□ 2.02
PTPRA-208ENST00000455631 MKL1Q969V6 931 aa27.7■■■□□ 2.02
PTPRA-208ENST00000455631 MTMR4Q9NYA4 1195 aa27.7■■■□□ 2.02
PTPRA-208ENST00000455631 SYNPO2Q9UMS6 1093 aa27.7■■■□□ 2.02
PTPRA-208ENST00000455631 DDX49Q9Y6V7 483 aaKnown RBP27.7■■■□□ 2.02
PTPRA-208ENST00000455631 REV3LO60673 3130 aa27.7■■■□□ 2.02
PTPRA-208ENST00000455631 XIRP2A4UGR9 3374 aa27.69■■■□□ 2.02
PTPRA-208ENST00000455631 EEPD1Q7L9B9 569 aa27.69■■■□□ 2.02
PTPRA-208ENST00000455631 FBXO16Q8IX29 292 aaPredicted RBP27.69■■■□□ 2.02
PTPRA-208ENST00000455631 AGBL1Q96MI9 1066 aa27.69■■■□□ 2.02
PTPRA-208ENST00000455631 ZNF287Q9HBT7 754 aa27.69■■■□□ 2.02
PTPRA-208ENST00000455631 TMEM232C9JQI7 657 aa27.68■■■□□ 2.02
PTPRA-208ENST00000455631 GTPBP6O43824 516 aaPredicted RBP27.68■■■□□ 2.02
PTPRA-208ENST00000455631 FDX1P10109 184 aa27.68■■■□□ 2.02
PTPRA-208ENST00000455631 TDO2P48775 406 aa27.68■■■□□ 2.02
PTPRA-208ENST00000455631 STAT2P52630 851 aa27.68■■■□□ 2.02
PTPRA-208ENST00000455631 IKQ13123 557 aaPredicted RBP27.68■■■□□ 2.02
PTPRA-208ENST00000455631 PDGFCQ9NRA1 345 aa27.68■■■□□ 2.02
PTPRA-208ENST00000455631 BDP1A6H8Y1 2624 aa27.68■■■□□ 2.02
PTPRA-208ENST00000455631 RFXAPO00287 272 aa27.67■■■□□ 2.02
PTPRA-208ENST00000455631 ERC2O15083 957 aa27.67■■■□□ 2.02
PTPRA-208ENST00000455631 CA3P07451 260 aa27.67■■■□□ 2.02
PTPRA-208ENST00000455631 TMEM67Q5HYA8 995 aa27.67■■■□□ 2.02
PTPRA-208ENST00000455631 ALDH8A1Q9H2A2 487 aaPredicted RBP27.67■■■□□ 2.02
PTPRA-208ENST00000455631 EPB41L4AQ9HCS5 686 aaPredicted RBP27.67■■■□□ 2.02
PTPRA-208ENST00000455631 PFKMP08237 780 aa27.66■■■□□ 2.02
PTPRA-208ENST00000455631 ALAS1P13196 640 aa27.66■■■□□ 2.02
PTPRA-208ENST00000455631 TTLL4Q14679 1199 aa27.66■■■□□ 2.02
PTPRA-208ENST00000455631 CHMP4CQ96CF2 233 aa27.66■■■□□ 2.02
PTPRA-208ENST00000455631 VWCEQ96DN2 955 aa27.66■■■□□ 2.02
PTPRA-208ENST00000455631 TRERF1Q96PN7 1200 aa27.66■■■□□ 2.02
PTPRA-208ENST00000455631 CERS4Q9HA82 394 aa27.66■■■□□ 2.02
PTPRA-208ENST00000455631 ZNF536O15090 1300 aa27.66■■■□□ 2.02
PTPRA-208ENST00000455631 PRRC2BQ5JSZ5 2229 aaKnown RBP27.65■■■□□ 2.02
PTPRA-208ENST00000455631 SCN5AQ14524 2016 aa27.65■■■□□ 2.02
PTPRA-208ENST00000455631 TKFCQ3LXA3 575 aa27.65■■■□□ 2.02
PTPRA-208ENST00000455631 TMEM63BQ5T3F8 832 aa27.65■■■□□ 2.02
PTPRA-208ENST00000455631 IQSEC1Q6DN90 963 aa27.65■■■□□ 2.02
PTPRA-208ENST00000455631 DEFB128Q7Z7B8 93 aa27.65■■■□□ 2.02
PTPRA-208ENST00000455631 FAM160B2Q86V87 743 aa27.65■■■□□ 2.02
PTPRA-208ENST00000455631 OSBP2Q969R2 916 aa27.65■■■□□ 2.02
PTPRA-208ENST00000455631 TRMT13Q9NUP7 481 aaKnown RBP27.65■■■□□ 2.02
PTPRA-208ENST00000455631 Q9Y3F1 56 aa27.65■■■□□ 2.02
PTPRA-208ENST00000455631 MTCH2Q9Y6C9 303 aa27.65■■■□□ 2.02
PTPRA-208ENST00000455631 PLIN4Q96Q06 1357 aa27.64■■■□□ 2.02
PTPRA-208ENST00000455631 APPP05067 770 aa27.64■■■□□ 2.02
PTPRA-208ENST00000455631 TSPY3P0CV98 308 aa27.64■■■□□ 2.02
PTPRA-208ENST00000455631 TSPY8P0CW00 308 aa27.64■■■□□ 2.02
PTPRA-208ENST00000455631 CYP2C9P11712 490 aa27.64■■■□□ 2.02
PTPRA-208ENST00000455631 HNRNPUQ00839 825 aaKnown RBP eCLIP27.64■■■□□ 2.02
PTPRA-208ENST00000455631 TAPT1Q6NXT6 567 aa27.64■■■□□ 2.02
PTPRA-208ENST00000455631 CHURC1Q8WUH1 139 aa27.64■■■□□ 2.02
PTPRA-208ENST00000455631 APPBP2Q92624 585 aa27.64■■■□□ 2.02
PTPRA-208ENST00000455631 HCN4Q9Y3Q4 1203 aa27.64■■■□□ 2.02
PTPRA-208ENST00000455631 LCTP09848 1927 aa27.63■■■□□ 2.01
PTPRA-208ENST00000455631 GPAA1O43292 621 aa27.63■■■□□ 2.01
PTPRA-208ENST00000455631 HOXD11P31277 338 aaPredicted RBP27.63■■■□□ 2.01
PTPRA-208ENST00000455631 SLC1A4P43007 532 aa27.63■■■□□ 2.01
PTPRA-208ENST00000455631 ZBTB40Q9NUA8 1239 aa27.63■■■□□ 2.01
PTPRA-208ENST00000455631 DDX19BQ9UMR2 479 aa27.63■■■□□ 2.01
PTPRA-208ENST00000455631 TNKSO95271 1327 aa27.63■■■□□ 2.01
PTPRA-208ENST00000455631 SUPT20HL2P0C7V6 817 aa27.62■■■□□ 2.01
PTPRA-208ENST00000455631 MS4A1P11836 297 aa27.62■■■□□ 2.01
PTPRA-208ENST00000455631 KIAA1211Q6ZU35 1233 aa27.62■■■□□ 2.01
PTPRA-208ENST00000455631 STAG1Q8WVM7 1258 aa27.62■■■□□ 2.01
PTPRA-208ENST00000455631 LRRCC1Q9C099 1032 aa27.62■■■□□ 2.01
PTPRA-208ENST00000455631 EPHX3Q9H6B9 360 aa27.62■■■□□ 2.01
PTPRA-208ENST00000455631 VTA1Q9NP79 307 aa27.62■■■□□ 2.01
PTPRA-208ENST00000455631 EPOPA6NHQ4 379 aa27.61■■■□□ 2.01
PTPRA-208ENST00000455631 ACTN1P12814 892 aa27.61■■■□□ 2.01
PTPRA-208ENST00000455631 GNAT2P19087 354 aa27.61■■■□□ 2.01
PTPRA-208ENST00000455631 POU3F3P20264 500 aaPredicted RBP27.61■■■□□ 2.01
PTPRA-208ENST00000455631 SNAP25P60880 206 aa27.61■■■□□ 2.01
PTPRA-208ENST00000455631 MUM1L1Q5H9M0 696 aa27.61■■■□□ 2.01
PTPRA-208ENST00000455631 KRT40Q6A162 431 aa27.61■■■□□ 2.01
PTPRA-208ENST00000455631 KBTBD3Q8NAB2 608 aa27.61■■■□□ 2.01
PTPRA-208ENST00000455631 NEDD1Q8NHV4 660 aa27.61■■■□□ 2.01
PTPRA-208ENST00000455631 GMCL1Q96IK5 515 aa27.61■■■□□ 2.01
PTPRA-208ENST00000455631 LRFN3Q9BTN0 628 aa27.61■■■□□ 2.01
PTPRA-208ENST00000455631 CYP39A1Q9NYL5 469 aa27.61■■■□□ 2.01
PTPRA-208ENST00000455631 SMARCA5O60264 1052 aaPredicted RBP27.6■■■□□ 2.01
PTPRA-208ENST00000455631 NSMFQ6X4W1 530 aa27.6■■■□□ 2.01
PTPRA-208ENST00000455631 ARNTL2Q8WYA1 636 aa27.6■■■□□ 2.01
PTPRA-208ENST00000455631 SLC9A7Q96T83 725 aa27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms