RNA–Protein interactions for RNA: ENST00000454704.5

GTF3C2-206, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 1 (best)

Gene GTF3C2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-206ENST00000454704 SAGE1Q9NXZ1 904 aa11.94□□□□□ -0.5
GTF3C2-206ENST00000454704 ADD3Q9UEY8 706 aaKnown RBP11.94□□□□□ -0.5
GTF3C2-206ENST00000454704 LIMA1Q9UHB6 759 aaKnown RBP11.94□□□□□ -0.5
GTF3C2-206ENST00000454704 RWDD2AQ9UIY3 292 aa11.94□□□□□ -0.5
GTF3C2-206ENST00000454704 MINPP1Q9UNW1 487 aa11.94□□□□□ -0.5
GTF3C2-206ENST00000454704 TTF2Q9UNY4 1162 aaKnown RBP11.94□□□□□ -0.5
GTF3C2-206ENST00000454704 CDK5RAP2Q96SN8 1893 aa11.94□□□□□ -0.5
GTF3C2-206ENST00000454704 LRRC10BA6NIK2 292 aa11.94□□□□□ -0.5
GTF3C2-206ENST00000454704 TMEM232C9JQI7 657 aa11.94□□□□□ -0.5
GTF3C2-206ENST00000454704 TRPA1O75762 1119 aa11.94□□□□□ -0.5
GTF3C2-206ENST00000454704 URI1O94763 535 aaPredicted RBP11.94□□□□□ -0.5
GTF3C2-206ENST00000454704 SLC10A3P09131 477 aa11.94□□□□□ -0.5
GTF3C2-206ENST00000454704 ZNF280AP59817 542 aaPredicted RBP11.94□□□□□ -0.5
GTF3C2-206ENST00000454704 GSTO1P78417 241 aa11.94□□□□□ -0.5
GTF3C2-206ENST00000454704 ANGEL2Q5VTE6 544 aaKnown RBP11.94□□□□□ -0.5
GTF3C2-206ENST00000454704 RSBN1LQ6PCB5 846 aaPredicted RBP11.94□□□□□ -0.5
GTF3C2-206ENST00000454704 TMCO3Q6UWJ1 677 aa11.94□□□□□ -0.5
GTF3C2-206ENST00000454704 ADGRA1Q86SQ6 560 aa11.94□□□□□ -0.5
GTF3C2-206ENST00000454704 TMTC1Q8IUR5 882 aa11.94□□□□□ -0.5
GTF3C2-206ENST00000454704 OXER1Q8TDS5 423 aa11.94□□□□□ -0.5
GTF3C2-206ENST00000454704 NOC3LQ8WTT2 800 aaKnown RBP11.94□□□□□ -0.5
GTF3C2-206ENST00000454704 RABGGTAQ92696 567 aa11.94□□□□□ -0.5
GTF3C2-206ENST00000454704 SYMPKQ92797 1274 aaKnown RBP11.94□□□□□ -0.5
GTF3C2-206ENST00000454704 FAM84BQ96KN1 310 aaPredicted RBP11.94□□□□□ -0.5
GTF3C2-206ENST00000454704 ZNF287Q9HBT7 754 aa11.94□□□□□ -0.5
GTF3C2-206ENST00000454704 TCP11L1Q9NUJ3 509 aa11.94□□□□□ -0.5
GTF3C2-206ENST00000454704 VPS54Q9P1Q0 977 aa11.94□□□□□ -0.5
GTF3C2-206ENST00000454704 MRFAP1Q9Y605 127 aa11.94□□□□□ -0.5
GTF3C2-206ENST00000454704 V9GY48 417 aaPredicted RBP11.94□□□□□ -0.5
GTF3C2-206ENST00000454704 PAPPA2Q9BXP8 1791 aa11.93□□□□□ -0.5
GTF3C2-206ENST00000454704 HIBADHP31937 336 aaKnown RBP11.93□□□□□ -0.5
GTF3C2-206ENST00000454704 PRPHP41219 470 aa11.93□□□□□ -0.5
GTF3C2-206ENST00000454704 GYG1P46976 350 aa11.93□□□□□ -0.5
GTF3C2-206ENST00000454704 NLRP5P59047 1200 aa11.93□□□□□ -0.5
GTF3C2-206ENST00000454704 GRIN1Q05586 938 aa11.93□□□□□ -0.5
GTF3C2-206ENST00000454704 KCNB1Q14721 858 aa11.93□□□□□ -0.5
GTF3C2-206ENST00000454704 NPY5RQ15761 445 aa11.93□□□□□ -0.5
GTF3C2-206ENST00000454704 E2F4Q16254 413 aa11.93□□□□□ -0.5
GTF3C2-206ENST00000454704 ZNF658Q5TYW1 1059 aaPredicted RBP11.93□□□□□ -0.5
GTF3C2-206ENST00000454704 APTXQ7Z2E3 356 aaKnown RBP11.93□□□□□ -0.5
GTF3C2-206ENST00000454704 MSL3Q8N5Y2 521 aaKnown RBP11.93□□□□□ -0.5
GTF3C2-206ENST00000454704 PDILTQ8N807 584 aa11.93□□□□□ -0.5
GTF3C2-206ENST00000454704 CEP112Q8N8E3 955 aa11.93□□□□□ -0.5
GTF3C2-206ENST00000454704 AGBL3Q8NEM8 1001 aa11.93□□□□□ -0.5
GTF3C2-206ENST00000454704 IQCDQ96DY2 449 aa11.93□□□□□ -0.5
GTF3C2-206ENST00000454704 DCP1AQ9NPI6 582 aaPredicted RBP11.93□□□□□ -0.5
GTF3C2-206ENST00000454704 RNF186Q9NXI6 227 aa11.93□□□□□ -0.5
GTF3C2-206ENST00000454704 FOCADQ5VW36 1801 aa11.93□□□□□ -0.5
GTF3C2-206ENST00000454704 XDHP47989 1333 aa11.92□□□□□ -0.5
GTF3C2-206ENST00000454704 DDX60LQ5H9U9 1706 aaKnown RBP11.92□□□□□ -0.5
GTF3C2-206ENST00000454704 TNRC18O15417 2968 aaPredicted RBP11.92□□□□□ -0.5
GTF3C2-206ENST00000454704 SPDYE4A6NLX3 237 aa11.92□□□□□ -0.5
GTF3C2-206ENST00000454704 PPP1R3GB7ZBB8 358 aa11.92□□□□□ -0.5
GTF3C2-206ENST00000454704 USP17L12C9JPN9 530 aa11.92□□□□□ -0.5
GTF3C2-206ENST00000454704 USP17L21D6R901 530 aa11.92□□□□□ -0.5
GTF3C2-206ENST00000454704 MFAP3LO75121 409 aa11.92□□□□□ -0.5
GTF3C2-206ENST00000454704 LDHCP07864 332 aa11.92□□□□□ -0.5
GTF3C2-206ENST00000454704 SMARCA1P28370 1054 aa11.92□□□□□ -0.5
GTF3C2-206ENST00000454704 GNG11P61952 73 aa11.92□□□□□ -0.5
GTF3C2-206ENST00000454704 PTGDRQ13258 359 aa11.92□□□□□ -0.5
GTF3C2-206ENST00000454704 STIM1Q13586 685 aa11.92□□□□□ -0.5
GTF3C2-206ENST00000454704 ERCC6LQ2NKX8 1250 aa11.92□□□□□ -0.5
GTF3C2-206ENST00000454704 ARHGAP29Q52LW3 1261 aa11.92□□□□□ -0.5
GTF3C2-206ENST00000454704 SPECC1Q5M775 1068 aa11.92□□□□□ -0.5
GTF3C2-206ENST00000454704 RASGRP2Q7LDG7 609 aa11.92□□□□□ -0.5
GTF3C2-206ENST00000454704 RASAL3Q86YV0 1011 aa11.92□□□□□ -0.5
GTF3C2-206ENST00000454704 IGSF22Q8N9C0 903 aa11.92□□□□□ -0.5
GTF3C2-206ENST00000454704 WDR66Q8TBY9 1149 aa11.92□□□□□ -0.5
GTF3C2-206ENST00000454704 CCDC12Q8WUD4 166 aaPredicted RBP11.92□□□□□ -0.5
GTF3C2-206ENST00000454704 GOLGA1Q92805 767 aa11.92□□□□□ -0.5
GTF3C2-206ENST00000454704 CCDC47Q96A33 483 aaKnown RBP11.92□□□□□ -0.5
GTF3C2-206ENST00000454704 SAMSN1Q9NSI8 373 aaKnown RBP11.92□□□□□ -0.5
GTF3C2-206ENST00000454704 SCAF8Q9UPN6 1271 aaKnown RBP11.92□□□□□ -0.5
GTF3C2-206ENST00000454704 UBE2Q2LH0YL09 131 aa11.91□□□□□ -0.5
GTF3C2-206ENST00000454704 KIF5CO60282 957 aa11.91□□□□□ -0.5
GTF3C2-206ENST00000454704 ZRANB2O95218 330 aaKnown RBP eCLIP11.91□□□□□ -0.5
GTF3C2-206ENST00000454704 PLEKHA8P1O95397 391 aa11.91□□□□□ -0.5
GTF3C2-206ENST00000454704 USP17L8P0C7I0 530 aa11.91□□□□□ -0.5
GTF3C2-206ENST00000454704 CLCN6P51797 869 aa11.91□□□□□ -0.5
GTF3C2-206ENST00000454704 PAK1Q13153 545 aa11.91□□□□□ -0.5
GTF3C2-206ENST00000454704 GRM4Q14833 912 aa11.91□□□□□ -0.5
GTF3C2-206ENST00000454704 PDXDC2PQ6P474 469 aa11.91□□□□□ -0.5
GTF3C2-206ENST00000454704 C15orf52Q6ZUT6 534 aaKnown RBP11.91□□□□□ -0.5
GTF3C2-206ENST00000454704 BLIDQ8IZY5 108 aa11.91□□□□□ -0.5
GTF3C2-206ENST00000454704 AK8Q96MA6 479 aa11.91□□□□□ -0.5
GTF3C2-206ENST00000454704 CSRNP1Q96S65 589 aa11.91□□□□□ -0.5
GTF3C2-206ENST00000454704 GMLQ99445 158 aa11.91□□□□□ -0.5
GTF3C2-206ENST00000454704 ARID3AQ99856 593 aa11.91□□□□□ -0.5
GTF3C2-206ENST00000454704 KAT14Q9H8E8 782 aa11.91□□□□□ -0.5
GTF3C2-206ENST00000454704 MYOZ2Q9NPC6 264 aa11.91□□□□□ -0.5
GTF3C2-206ENST00000454704 PCDHA4Q9UN74 947 aa11.91□□□□□ -0.5
GTF3C2-206ENST00000454704 ZNF646O15015 1829 aaPredicted RBP11.91□□□□□ -0.5
GTF3C2-206ENST00000454704 A0A1W2PQC6 194 aa11.9□□□□□ -0.5
GTF3C2-206ENST00000454704 CCDC66A2RUB6 948 aa11.9□□□□□ -0.5
GTF3C2-206ENST00000454704 WTIPA6NIX2 430 aaPredicted RBP11.9□□□□□ -0.5
GTF3C2-206ENST00000454704 TSPY2A6NKD2 308 aa11.9□□□□□ -0.5
GTF3C2-206ENST00000454704 hCG_1984214I3L0E3 225 aa11.9□□□□□ -0.5
GTF3C2-206ENST00000454704 SNAP23O00161 211 aa11.9□□□□□ -0.5
GTF3C2-206ENST00000454704 EEF1GP26641 437 aaKnown RBP11.9□□□□□ -0.5
GTF3C2-206ENST00000454704 SOX10P56693 466 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms