RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 CCDC96Q2M329 555 aa10.16□□□□□ -0.78
COL28A1-205ENST00000453441 ADCK5Q3MIX3 580 aa10.16□□□□□ -0.78
COL28A1-205ENST00000453441 C17orf99Q6UX52 265 aa10.16□□□□□ -0.78
COL28A1-205ENST00000453441 BTNL9Q6UXG8 535 aa10.16□□□□□ -0.78
COL28A1-205ENST00000453441 NFXL1Q6ZNB6 911 aa10.16□□□□□ -0.78
COL28A1-205ENST00000453441 ERO1AQ96HE7 468 aa10.16□□□□□ -0.78
COL28A1-205ENST00000453441 LZTS2Q9BRK4 669 aa10.16□□□□□ -0.78
COL28A1-205ENST00000453441 AGXT2Q9BYV1 514 aa10.16□□□□□ -0.78
COL28A1-205ENST00000453441 BACH2Q9BYV9 841 aa10.16□□□□□ -0.78
COL28A1-205ENST00000453441 C22orf23Q9BZE7 217 aa10.16□□□□□ -0.78
COL28A1-205ENST00000453441 ALDH8A1Q9H2A2 487 aaPredicted RBP10.16□□□□□ -0.78
COL28A1-205ENST00000453441 ADAMTS5Q9UNA0 930 aa10.16□□□□□ -0.78
COL28A1-205ENST00000453441 SLC12A7Q9Y666 1083 aa10.16□□□□□ -0.78
COL28A1-205ENST00000453441 A0A0G2JMZ2 1700 aa10.16□□□□□ -0.78
COL28A1-205ENST00000453441 RLFQ13129 1914 aa10.15□□□□□ -0.78
COL28A1-205ENST00000453441 GPR25O00155 361 aa10.15□□□□□ -0.78
COL28A1-205ENST00000453441 FKTNO75072 461 aa10.15□□□□□ -0.78
COL28A1-205ENST00000453441 ZBED4O75132 1171 aa10.15□□□□□ -0.78
COL28A1-205ENST00000453441 CYP2C8P10632 490 aa10.15□□□□□ -0.78
COL28A1-205ENST00000453441 SMARCA1P28370 1054 aa10.15□□□□□ -0.78
COL28A1-205ENST00000453441 SP3Q02447 781 aa10.15□□□□□ -0.78
COL28A1-205ENST00000453441 TROAPQ12815 778 aa10.15□□□□□ -0.78
COL28A1-205ENST00000453441 TRAF1Q13077 416 aa10.15□□□□□ -0.78
COL28A1-205ENST00000453441 DGKZQ13574 1117 aa10.15□□□□□ -0.78
COL28A1-205ENST00000453441 GRM4Q14833 912 aa10.15□□□□□ -0.78
COL28A1-205ENST00000453441 KIAA1755Q5JYT7 1200 aa10.15□□□□□ -0.78
COL28A1-205ENST00000453441 CHST3Q7LGC8 479 aa10.15□□□□□ -0.78
COL28A1-205ENST00000453441 ZNF654Q8IZM8 581 aa10.15□□□□□ -0.78
COL28A1-205ENST00000453441 GPRC5AQ8NFJ5 357 aa10.15□□□□□ -0.78
COL28A1-205ENST00000453441 CTCFLQ8NI51 663 aaPredicted RBP10.15□□□□□ -0.78
COL28A1-205ENST00000453441 NKX2-3Q8TAU0 364 aa10.15□□□□□ -0.78
COL28A1-205ENST00000453441 P2RX7Q99572 595 aaKnown RBP10.15□□□□□ -0.78
COL28A1-205ENST00000453441 IL21Q9HBE4 155 aa10.15□□□□□ -0.78
COL28A1-205ENST00000453441 PRDM10Q9NQV6 1147 aa10.15□□□□□ -0.78
COL28A1-205ENST00000453441 ISY1Q9ULR0 285 aaKnown RBP10.15□□□□□ -0.78
COL28A1-205ENST00000453441 CTDP1Q9Y5B0 961 aaPredicted RBP10.15□□□□□ -0.78
COL28A1-205ENST00000453441 CCDC196A0A1B0GTZ2 297 aa10.14□□□□□ -0.79
COL28A1-205ENST00000453441 TMEM232C9JQI7 657 aa10.14□□□□□ -0.79
COL28A1-205ENST00000453441 ATP2A1O14983 1001 aa10.14□□□□□ -0.79
COL28A1-205ENST00000453441 FOXN1O15353 648 aa10.14□□□□□ -0.79
COL28A1-205ENST00000453441 TBC1D8O95759 1140 aa10.14□□□□□ -0.79
COL28A1-205ENST00000453441 HSPA8P11142 646 aaKnown RBP10.14□□□□□ -0.79
COL28A1-205ENST00000453441 EVCP57679 992 aa10.14□□□□□ -0.79
COL28A1-205ENST00000453441 IKQ13123 557 aaPredicted RBP10.14□□□□□ -0.79
COL28A1-205ENST00000453441 TJAP1Q5JTD0 557 aa10.14□□□□□ -0.79
COL28A1-205ENST00000453441 Q6ZUG5 572 aa10.14□□□□□ -0.79
COL28A1-205ENST00000453441 SHCBP1Q8NEM2 672 aa10.14□□□□□ -0.79
COL28A1-205ENST00000453441 CHMP4CQ96CF2 233 aa10.14□□□□□ -0.79
COL28A1-205ENST00000453441 MAF1Q9H063 256 aa10.14□□□□□ -0.79
COL28A1-205ENST00000453441 RBM28Q9NW13 759 aaKnown RBP10.14□□□□□ -0.79
COL28A1-205ENST00000453441 NID2Q14112 1375 aa10.14□□□□□ -0.79
COL28A1-205ENST00000453441 PALM3A6NDB9 673 aaPredicted RBP10.13□□□□□ -0.79
COL28A1-205ENST00000453441 VWA5AO00534 786 aa10.13□□□□□ -0.79
COL28A1-205ENST00000453441 ZBTB43O43298 467 aa10.13□□□□□ -0.79
COL28A1-205ENST00000453441 ACTN4O43707 911 aaKnown RBP10.13□□□□□ -0.79
COL28A1-205ENST00000453441 SLC25A27O95847 323 aa10.13□□□□□ -0.79
COL28A1-205ENST00000453441 CFHP08603 1231 aa10.13□□□□□ -0.79
COL28A1-205ENST00000453441 MAPK4P31152 587 aa10.13□□□□□ -0.79
COL28A1-205ENST00000453441 PRMT2P55345 433 aa10.13□□□□□ -0.79
COL28A1-205ENST00000453441 FCGRTP55899 365 aa10.13□□□□□ -0.79
COL28A1-205ENST00000453441 ERVK-9P63128 1117 aa10.13□□□□□ -0.79
COL28A1-205ENST00000453441 ERVK-24P63145 666 aa10.13□□□□□ -0.79
COL28A1-205ENST00000453441 RABEP1Q15276 862 aa10.13□□□□□ -0.79
COL28A1-205ENST00000453441 TKFCQ3LXA3 575 aa10.13□□□□□ -0.79
COL28A1-205ENST00000453441 SYDE2Q5VT97 1194 aa10.13□□□□□ -0.79
COL28A1-205ENST00000453441 APOA5Q6Q788 366 aa10.13□□□□□ -0.79
COL28A1-205ENST00000453441 KCTD1Q719H9 257 aa10.13□□□□□ -0.79
COL28A1-205ENST00000453441 CCAR1Q8IX12 1150 aaKnown RBP10.13□□□□□ -0.79
COL28A1-205ENST00000453441 TBC1D32Q96NH3 1257 aa10.13□□□□□ -0.79
COL28A1-205ENST00000453441 NUP88Q99567 741 aaPredicted RBP10.13□□□□□ -0.79
COL28A1-205ENST00000453441 MTRQ99707 1265 aa10.13□□□□□ -0.79
COL28A1-205ENST00000453441 TEX13BQ9BXU2 312 aa10.13□□□□□ -0.79
COL28A1-205ENST00000453441 MROH8Q9H579 483 aa10.13□□□□□ -0.79
COL28A1-205ENST00000453441 SLC38A10Q9HBR0 1119 aa10.13□□□□□ -0.79
COL28A1-205ENST00000453441 PDRG1Q9NUG6 133 aa10.13□□□□□ -0.79
COL28A1-205ENST00000453441 RBPJLQ9UBG7 517 aa10.13□□□□□ -0.79
COL28A1-205ENST00000453441 CPA4Q9UI42 421 aa10.13□□□□□ -0.79
COL28A1-205ENST00000453441 PRR12Q9ULL5 1215 aa10.13□□□□□ -0.79
COL28A1-205ENST00000453441 PCNTO95613 3336 aa10.13□□□□□ -0.79
COL28A1-205ENST00000453441 KLF18A0A0U1RQI7 1052 aa10.12□□□□□ -0.79
COL28A1-205ENST00000453441 KLRF2D3W0D1 207 aa10.12□□□□□ -0.79
COL28A1-205ENST00000453441 HOXD10P28358 340 aa10.12□□□□□ -0.79
COL28A1-205ENST00000453441 LACTBP83111 547 aaPredicted RBP10.12□□□□□ -0.79
COL28A1-205ENST00000453441 ANKRD13CQ8N6S4 541 aa10.12□□□□□ -0.79
COL28A1-205ENST00000453441 FANCBQ8NB91 859 aa10.12□□□□□ -0.79
COL28A1-205ENST00000453441 NUP133Q8WUM0 1156 aa10.12□□□□□ -0.79
COL28A1-205ENST00000453441 ZNF296Q8WUU4 475 aaPredicted RBP10.12□□□□□ -0.79
COL28A1-205ENST00000453441 BRF1Q92994 677 aa10.12□□□□□ -0.79
COL28A1-205ENST00000453441 KIFC2Q96AC6 838 aa10.12□□□□□ -0.79
COL28A1-205ENST00000453441 ATG4CQ96DT6 458 aa10.12□□□□□ -0.79
COL28A1-205ENST00000453441 ZNF274Q96GC6 653 aaPredicted RBP10.12□□□□□ -0.79
COL28A1-205ENST00000453441 PAGR1Q9BTK6 254 aa10.12□□□□□ -0.79
COL28A1-205ENST00000453441 SPZ1Q9BXG8 430 aa10.12□□□□□ -0.79
COL28A1-205ENST00000453441 RANBP17Q9H2T7 1088 aaKnown RBP10.12□□□□□ -0.79
COL28A1-205ENST00000453441 FBXO28Q9NVF7 368 aa10.12□□□□□ -0.79
COL28A1-205ENST00000453441 FBXO40Q9UH90 709 aa10.12□□□□□ -0.79
COL28A1-205ENST00000453441 MTMR7Q9Y216 660 aa10.12□□□□□ -0.79
COL28A1-205ENST00000453441 PCDHB3Q9Y5E6 796 aa10.12□□□□□ -0.79
COL28A1-205ENST00000453441 FRMPD2Q68DX3 1309 aaPredicted RBP10.11□□□□□ -0.79
COL28A1-205ENST00000453441 DDX11L8A8MPP1 907 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms