RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 DENND2CQ68D51 928 aa8.53□□□□□ -1.04
RIF1-206ENST00000453091 CCDC51Q96ER9 411 aa8.53□□□□□ -1.04
RIF1-206ENST00000453091 NHEJ1Q9H9Q4 299 aaPredicted RBP8.53□□□□□ -1.04
RIF1-206ENST00000453091 FAM169AQ9Y6X4 670 aa8.53□□□□□ -1.04
RIF1-206ENST00000453091 PHLPP2Q6ZVD8 1323 aa8.53□□□□□ -1.04
RIF1-206ENST00000453091 KLRF2D3W0D1 207 aa8.53□□□□□ -1.04
RIF1-206ENST00000453091 FERP16591 822 aa8.53□□□□□ -1.04
RIF1-206ENST00000453091 CDC27P30260 824 aa8.53□□□□□ -1.04
RIF1-206ENST00000453091 GCKP35557 465 aa8.53□□□□□ -1.04
RIF1-206ENST00000453091 VWA3BQ502W6 1294 aa8.53□□□□□ -1.04
RIF1-206ENST00000453091 OTUD6AQ7L8S5 288 aa8.53□□□□□ -1.04
RIF1-206ENST00000453091 REXO1Q8N1G1 1221 aaKnown RBP8.53□□□□□ -1.04
RIF1-206ENST00000453091 MCUR1Q96AQ8 359 aa8.53□□□□□ -1.04
RIF1-206ENST00000453091 COPRSQ9NQ92 184 aa8.53□□□□□ -1.04
RIF1-206ENST00000453091 POLR3EQ9NVU0 708 aa8.53□□□□□ -1.04
RIF1-206ENST00000453091 IGSF1Q8N6C5 1336 aa8.53□□□□□ -1.04
RIF1-206ENST00000453091 CIB2O75838 187 aa8.53□□□□□ -1.04
RIF1-206ENST00000453091 TUBBP07437 444 aa8.53□□□□□ -1.04
RIF1-206ENST00000453091 ARHGAP25P42331 645 aa8.53□□□□□ -1.04
RIF1-206ENST00000453091 PABPC4Q13310 644 aaKnown RBP eCLIP8.53□□□□□ -1.04
RIF1-206ENST00000453091 RUFY4Q6ZNE9 571 aa8.53□□□□□ -1.04
RIF1-206ENST00000453091 UBL4BQ8N7F7 174 aa8.53□□□□□ -1.04
RIF1-206ENST00000453091 TCP11Q8WWU5 503 aa8.53□□□□□ -1.04
RIF1-206ENST00000453091 BABAM1Q9NWV8 329 aa8.53□□□□□ -1.04
RIF1-206ENST00000453091 ATP8A1Q9Y2Q0 1164 aa8.53□□□□□ -1.04
RIF1-206ENST00000453091 SAMD9Q5K651 1589 aa8.53□□□□□ -1.04
RIF1-206ENST00000453091 LOC102724428A0A0B4J2F2 783 aa8.52□□□□□ -1.04
RIF1-206ENST00000453091 A0A1B0GUA9 196 aa8.52□□□□□ -1.04
RIF1-206ENST00000453091 USP17L3A6NCW0 530 aa8.52□□□□□ -1.04
RIF1-206ENST00000453091 USP17L4A6NCW7 530 aa8.52□□□□□ -1.04
RIF1-206ENST00000453091 PPP6R2O75170 966 aa8.52□□□□□ -1.04
RIF1-206ENST00000453091 CSPG5O95196 566 aa8.52□□□□□ -1.04
RIF1-206ENST00000453091 BAG2O95816 211 aa8.52□□□□□ -1.04
RIF1-206ENST00000453091 SIK1P57059 783 aa8.52□□□□□ -1.04
RIF1-206ENST00000453091 MIGA2Q7L4E1 593 aa8.52□□□□□ -1.04
RIF1-206ENST00000453091 USP17L1Q7RTZ2 530 aa8.52□□□□□ -1.04
RIF1-206ENST00000453091 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.52□□□□□ -1.047e-11■■■■□ 26.1
RIF1-206ENST00000453091 ALAS1P13196 640 aa8.52□□□□□ -1.05
RIF1-206ENST00000453091 CD19P15391 556 aa8.52□□□□□ -1.05
RIF1-206ENST00000453091 MESDQ14696 234 aa8.52□□□□□ -1.05
RIF1-206ENST00000453091 KRT31Q15323 416 aa8.52□□□□□ -1.05
RIF1-206ENST00000453091 WDR44Q5JSH3 913 aa8.52□□□□□ -1.05
RIF1-206ENST00000453091 FAM196AQ6ZSG2 479 aa8.52□□□□□ -1.05
RIF1-206ENST00000453091 CCDC127Q96BQ5 260 aa8.52□□□□□ -1.05
RIF1-206ENST00000453091 ARPP21Q9UBL0 812 aaPredicted RBP8.52□□□□□ -1.05
RIF1-206ENST00000453091 FAM184BQ9ULE4 1060 aa8.52□□□□□ -1.05
RIF1-206ENST00000453091 SCAF8Q9UPN6 1271 aaKnown RBP8.52□□□□□ -1.05
RIF1-206ENST00000453091 SYNMO15061 1565 aa8.52□□□□□ -1.05
RIF1-206ENST00000453091 MYO1CO00159 1063 aa8.52□□□□□ -1.05
RIF1-206ENST00000453091 MMP1P03956 469 aa8.52□□□□□ -1.05
RIF1-206ENST00000453091 ADCY8P40145 1251 aa8.52□□□□□ -1.05
RIF1-206ENST00000453091 PLTPP55058 493 aa8.52□□□□□ -1.05
RIF1-206ENST00000453091 MAP3K9P80192 1104 aa8.52□□□□□ -1.05
RIF1-206ENST00000453091 FAM102BQ5T8I3 360 aa8.52□□□□□ -1.05
RIF1-206ENST00000453091 WDR24Q96S15 920 aa8.52□□□□□ -1.05
RIF1-206ENST00000453091 SMARCAL1Q9NZC9 954 aa8.52□□□□□ -1.05
RIF1-206ENST00000453091 NFU1Q9UMS0 254 aa8.52□□□□□ -1.05
RIF1-206ENST00000453091 MED23Q9ULK4 1368 aa8.52□□□□□ -1.05
RIF1-206ENST00000453091 UBN2Q6ZU65 1347 aa8.52□□□□□ -1.05
RIF1-206ENST00000453091 MROH5Q6ZUA9 1318 aa8.52□□□□□ -1.05
RIF1-206ENST00000453091 FAM205CA6NFA0 338 aa8.52□□□□□ -1.05
RIF1-206ENST00000453091 EAPPQ56P03 285 aaPredicted RBP8.52□□□□□ -1.05
RIF1-206ENST00000453091 MAK16Q9BXY0 300 aaKnown RBP8.52□□□□□ -1.05
RIF1-206ENST00000453091 TBK1Q9UHD2 729 aa8.52□□□□□ -1.05
RIF1-206ENST00000453091 PACSIN2Q9UNF0 486 aaPredicted RBP8.52□□□□□ -1.05
RIF1-206ENST00000453091 MAGED2Q9UNF1 606 aaPredicted RBP8.52□□□□□ -1.05
RIF1-206ENST00000453091 DNM2P50570 870 aa8.52□□□□□ -1.05
RIF1-206ENST00000453091 ACTN3Q08043 901 aaPredicted RBP8.52□□□□□ -1.05
RIF1-206ENST00000453091 FYB2Q5VWT5 728 aa8.52□□□□□ -1.05
RIF1-206ENST00000453091 STOX1Q6ZVD7 989 aa8.52□□□□□ -1.05
RIF1-206ENST00000453091 CTAGE3PQ8IX95 158 aa8.52□□□□□ -1.05
RIF1-206ENST00000453091 TPX2Q9ULW0 747 aaKnown RBP8.52□□□□□ -1.05
RIF1-206ENST00000453091 STIM2Q9P246 746 aa8.52□□□□□ -1.05
RIF1-206ENST00000453091 SFI1A8K8P3 1242 aa8.52□□□□□ -1.05
RIF1-206ENST00000453091 POC1B-GALNT4F8VUJ3 575 aa8.52□□□□□ -1.05
RIF1-206ENST00000453091 IKBKBO14920 756 aa8.52□□□□□ -1.05
RIF1-206ENST00000453091 CYP27B1O15528 508 aa8.52□□□□□ -1.05
RIF1-206ENST00000453091 TUBB4BP68371 445 aa8.52□□□□□ -1.05
RIF1-206ENST00000453091 ZNF710Q8N1W2 664 aa8.52□□□□□ -1.05
RIF1-206ENST00000453091 TFR2Q9UP52 801 aa8.52□□□□□ -1.05
RIF1-206ENST00000453091 MAP3K15Q6ZN16 1313 aa8.51□□□□□ -1.05
RIF1-206ENST00000453091 TESPA1A2RU30 521 aaPredicted RBP8.51□□□□□ -1.05
RIF1-206ENST00000453091 PCCAP05165 728 aaPredicted RBP8.51□□□□□ -1.05
RIF1-206ENST00000453091 MAN1A1P33908 653 aa8.51□□□□□ -1.05
RIF1-206ENST00000453091 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.51□□□□□ -1.05
RIF1-206ENST00000453091 STK32BQ9NY57 414 aa8.51□□□□□ -1.05
RIF1-206ENST00000453091 IGKV5-2P06315 115 aa8.51□□□□□ -1.05
RIF1-206ENST00000453091 KIF22Q14807 665 aa8.51□□□□□ -1.05
RIF1-206ENST00000453091 KIAA1024Q9UPX6 916 aa8.51□□□□□ -1.05
RIF1-206ENST00000453091 H0YIN7 160 aa8.51□□□□□ -1.05
RIF1-206ENST00000453091 PPFIA4O75335 1185 aa8.51□□□□□ -1.05
RIF1-206ENST00000453091 FLOT1O75955 427 aa8.51□□□□□ -1.05
RIF1-206ENST00000453091 ADD2P35612 726 aa8.51□□□□□ -1.05
RIF1-206ENST00000453091 HAUS3Q68CZ6 603 aa8.51□□□□□ -1.05
RIF1-206ENST00000453091 NEK8Q86SG6 692 aa8.51□□□□□ -1.05
RIF1-206ENST00000453091 H7C1D1 291 aa8.51□□□□□ -1.05
RIF1-206ENST00000453091 MFAP3LO75121 409 aa8.51□□□□□ -1.05
RIF1-206ENST00000453091 GFPT2O94808 682 aa8.51□□□□□ -1.05
RIF1-206ENST00000453091 GUCY1A2P33402 732 aa8.51□□□□□ -1.05
RIF1-206ENST00000453091 GGCXP38435 758 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms