RNA–Protein interactions for RNA: ENST00000452776.1

SMCO1-202, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

TSL 1 (best)

Gene SMCO1, Length 1,846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-202ENST00000452776 CYP21A2P08686 494 aa9.26□□□□□ -0.93
SMCO1-202ENST00000452776 FDPSP14324 419 aaKnown RBP9.26□□□□□ -0.93
SMCO1-202ENST00000452776 DRD4P21917 467 aa9.26□□□□□ -0.93
SMCO1-202ENST00000452776 EIF3BP55884 814 aaKnown RBP9.26□□□□□ -0.93
SMCO1-202ENST00000452776 GUCY1B3Q02153 619 aa9.26□□□□□ -0.93
SMCO1-202ENST00000452776 KLC1Q07866 573 aa9.26□□□□□ -0.93
SMCO1-202ENST00000452776 C2orf54Q08AI8 447 aa9.26□□□□□ -0.93
SMCO1-202ENST00000452776 CUL1Q13616 776 aa9.26□□□□□ -0.93
SMCO1-202ENST00000452776 PTPAQ15257 358 aa9.26□□□□□ -0.93
SMCO1-202ENST00000452776 CDK19Q9BWU1 502 aa9.26□□□□□ -0.93
SMCO1-202ENST00000452776 MIS12Q9H081 205 aa9.26□□□□□ -0.93
SMCO1-202ENST00000452776 HELLSQ9NRZ9 838 aa9.26□□□□□ -0.93
SMCO1-202ENST00000452776 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.26□□□□□ -0.93
SMCO1-202ENST00000452776 LARSQ9P2J5 1176 aaKnown RBP9.26□□□□□ -0.93
SMCO1-202ENST00000452776 HDAC6Q9UBN7 1215 aa9.26□□□□□ -0.93
SMCO1-202ENST00000452776 DMGDHQ9UI17 866 aaKnown RBP9.26□□□□□ -0.93
SMCO1-202ENST00000452776 CAPN11Q9UMQ6 739 aa9.26□□□□□ -0.93
SMCO1-202ENST00000452776 WDR37Q9Y2I8 494 aa9.26□□□□□ -0.93
SMCO1-202ENST00000452776 WDR19Q8NEZ3 1342 aa9.25□□□□□ -0.93
SMCO1-202ENST00000452776 SYNRGQ9UMZ2 1314 aa9.25□□□□□ -0.93
SMCO1-202ENST00000452776 PRPF3O43395 683 aaKnown RBP9.25□□□□□ -0.93
SMCO1-202ENST00000452776 SRGAP2O75044 1071 aa9.25□□□□□ -0.93
SMCO1-202ENST00000452776 ATP5HO75947 161 aa9.25□□□□□ -0.93
SMCO1-202ENST00000452776 LMNAP02545 664 aaKnown RBP9.25□□□□□ -0.93
SMCO1-202ENST00000452776 HOXB7P09629 217 aa9.25□□□□□ -0.93
SMCO1-202ENST00000452776 ATP6V1C1P21283 382 aa9.25□□□□□ -0.93
SMCO1-202ENST00000452776 MARCKSP29966 332 aaPredicted RBP9.25□□□□□ -0.93
SMCO1-202ENST00000452776 ALDH1B1P30837 517 aa9.25□□□□□ -0.93
SMCO1-202ENST00000452776 SKIV2L2P42285 1042 aaKnown RBP9.25□□□□□ -0.93
SMCO1-202ENST00000452776 PSMD7P51665 324 aa9.25□□□□□ -0.93
SMCO1-202ENST00000452776 TRIM29Q14134 588 aa9.25□□□□□ -0.93
SMCO1-202ENST00000452776 TTF1Q15361 905 aaPredicted RBP9.25□□□□□ -0.93
SMCO1-202ENST00000452776 SPA17Q15506 151 aa9.25□□□□□ -0.93
SMCO1-202ENST00000452776 CCDC152Q4G0S7 254 aa9.25□□□□□ -0.93
SMCO1-202ENST00000452776 SULT6B1Q6IMI4 303 aa9.25□□□□□ -0.93
SMCO1-202ENST00000452776 PIGWQ7Z7B1 504 aa9.25□□□□□ -0.93
SMCO1-202ENST00000452776 GSPT2Q8IYD1 628 aaKnown RBP9.25□□□□□ -0.93
SMCO1-202ENST00000452776 RAPGEF5Q92565 580 aa9.25□□□□□ -0.93
SMCO1-202ENST00000452776 IWS1Q96ST2 819 aa9.25□□□□□ -0.93
SMCO1-202ENST00000452776 LZTS2Q9BRK4 669 aa9.25□□□□□ -0.93
SMCO1-202ENST00000452776 KCNMB3Q9NPA1 279 aa9.25□□□□□ -0.93
SMCO1-202ENST00000452776 DNAAF2Q9NVR5 837 aaKnown RBP9.25□□□□□ -0.93
SMCO1-202ENST00000452776 RPL26L1Q9UNX3 145 aaKnown RBP9.25□□□□□ -0.93
SMCO1-202ENST00000452776 C2CD2Q9Y426 696 aa9.25□□□□□ -0.93
SMCO1-202ENST00000452776 XRN1Q8IZH2 1706 aaKnown RBP9.25□□□□□ -0.93
SMCO1-202ENST00000452776 DPPA5A6NC42 116 aa9.24□□□□□ -0.93
SMCO1-202ENST00000452776 OPLAHO14841 1288 aa9.24□□□□□ -0.93
SMCO1-202ENST00000452776 CEP104O60308 925 aa9.24□□□□□ -0.93
SMCO1-202ENST00000452776 MYL1P05976 194 aa9.24□□□□□ -0.93
SMCO1-202ENST00000452776 CCDC166P0CW27 439 aa9.24□□□□□ -0.93
SMCO1-202ENST00000452776 ACADSP16219 412 aa9.24□□□□□ -0.93
SMCO1-202ENST00000452776 CDC27P30260 824 aa9.24□□□□□ -0.93
SMCO1-202ENST00000452776 PCK1P35558 622 aa9.24□□□□□ -0.93
SMCO1-202ENST00000452776 FOSBP53539 338 aa9.24□□□□□ -0.93
SMCO1-202ENST00000452776 MRPS25P82663 173 aaKnown RBP9.24□□□□□ -0.93
SMCO1-202ENST00000452776 RASA3Q14644 834 aa9.24□□□□□ -0.93
SMCO1-202ENST00000452776 MEA1Q16626 185 aa9.24□□□□□ -0.93
SMCO1-202ENST00000452776 PPP1R15BQ5SWA1 713 aa9.24□□□□□ -0.93
SMCO1-202ENST00000452776 HAUS3Q68CZ6 603 aa9.24□□□□□ -0.93
SMCO1-202ENST00000452776 IRGCQ6NXR0 463 aa9.24□□□□□ -0.93
SMCO1-202ENST00000452776 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.24□□□□□ -0.93
SMCO1-202ENST00000452776 TRPM8Q7Z2W7 1104 aa9.24□□□□□ -0.93
SMCO1-202ENST00000452776 TBC1D1Q86TI0 1168 aaPredicted RBP9.24□□□□□ -0.93
SMCO1-202ENST00000452776 FGD4Q96M96 766 aa9.24□□□□□ -0.93
SMCO1-202ENST00000452776 KRT23Q9C075 422 aa9.24□□□□□ -0.93
SMCO1-202ENST00000452776 PANK4Q9NVE7 773 aa9.24□□□□□ -0.93
SMCO1-202ENST00000452776 SCOCQ9UIL1 159 aa9.24□□□□□ -0.93
SMCO1-202ENST00000452776 ZNF232Q9UNY5 417 aa9.24□□□□□ -0.93
SMCO1-202ENST00000452776 EID1Q9Y6B2 187 aa9.24□□□□□ -0.93
SMCO1-202ENST00000452776 CAMSAP1Q5T5Y3 1602 aa9.24□□□□□ -0.93
SMCO1-202ENST00000452776 MROH7-TTC4A0A0A0MT08 1334 aa9.24□□□□□ -0.93
SMCO1-202ENST00000452776 A0A0U1RQJ8 604 aa9.24□□□□□ -0.93
SMCO1-202ENST00000452776 H7C1D1 291 aa9.24□□□□□ -0.93
SMCO1-202ENST00000452776 PDE2AO00408 941 aaPredicted RBP9.24□□□□□ -0.93
SMCO1-202ENST00000452776 E2F6O75461 281 aa9.24□□□□□ -0.93
SMCO1-202ENST00000452776 TFRCP02786 760 aaKnown RBP9.24□□□□□ -0.93
SMCO1-202ENST00000452776 HDGFP51858 240 aaKnown RBP9.24□□□□□ -0.93
SMCO1-202ENST00000452776 SLC4A8Q2Y0W8 1093 aa9.24□□□□□ -0.93
SMCO1-202ENST00000452776 ERMARDQ5T6L9 678 aa9.24□□□□□ -0.93
SMCO1-202ENST00000452776 AFAP1Q8N556 730 aa9.24□□□□□ -0.93
SMCO1-202ENST00000452776 RNF10Q8N5U6 811 aaKnown RBP9.24□□□□□ -0.93
SMCO1-202ENST00000452776 WDR66Q8TBY9 1149 aa9.24□□□□□ -0.93
SMCO1-202ENST00000452776 PIK3R5Q8WYR1 880 aa9.24□□□□□ -0.93
SMCO1-202ENST00000452776 WASF1Q92558 559 aa9.24□□□□□ -0.93
SMCO1-202ENST00000452776 NECTIN2Q92692 538 aa9.24□□□□□ -0.93
SMCO1-202ENST00000452776 KIFAP3Q92845 792 aa9.24□□□□□ -0.93
SMCO1-202ENST00000452776 RBM17Q96I25 401 aaKnown RBP9.24□□□□□ -0.93
SMCO1-202ENST00000452776 MAP3K14Q99558 947 aa9.24□□□□□ -0.93
SMCO1-202ENST00000452776 UBA5Q9GZZ9 404 aa9.24□□□□□ -0.93
SMCO1-202ENST00000452776 RANBP17Q9H2T7 1088 aaKnown RBP9.24□□□□□ -0.93
SMCO1-202ENST00000452776 PDP2Q9P2J9 529 aa9.24□□□□□ -0.93
SMCO1-202ENST00000452776 RWDD2AQ9UIY3 292 aa9.24□□□□□ -0.93
SMCO1-202ENST00000452776 PLAAQ9Y263 795 aa9.24□□□□□ -0.93
SMCO1-202ENST00000452776 L3MBTL1Q9Y468 752 aa9.24□□□□□ -0.93
SMCO1-202ENST00000452776 ZFYVE16Q7Z3T8 1539 aa9.23□□□□□ -0.93
SMCO1-202ENST00000452776 MROH2AA6NES4 1674 aa9.23□□□□□ -0.93
SMCO1-202ENST00000452776 EVI5O60447 810 aa9.23□□□□□ -0.93
SMCO1-202ENST00000452776 GNAQP50148 359 aa9.23□□□□□ -0.93
SMCO1-202ENST00000452776 COPB1P53618 953 aaKnown RBP9.23□□□□□ -0.93
SMCO1-202ENST00000452776 TNNC1P63316 161 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 288 ms