RNA–Protein interactions for RNA: ENST00000452668.1

CHKB-CPT1B-201, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

TSL 4

Gene CHKB-CPT1B, Length 546 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-201ENST00000452668 PPP1R12CQ9BZL4 782 aa14.01□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 VTA1Q9NP79 307 aa14.01□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 TBX21Q9UL17 535 aa14.01□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.01□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 PTPDC1A2A3K4 754 aa14□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 SOWAHBA6NEL2 793 aa14□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 NMT2O60551 498 aa14□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 ICAM1P05362 532 aa14□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 DNAJB2P25686 324 aa14□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 CDK7P50613 346 aa14□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 EPHB4P54760 987 aa14□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 SNAP25P60880 206 aa14□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 BEX3Q00994 111 aa14□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 ALX1Q15699 326 aa14□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 SYDE2Q5VT97 1194 aa14□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 CXCL17Q6UXB2 119 aa14□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 KIAA1211Q6ZU35 1233 aa14□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 EEPD1Q7L9B9 569 aa14□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 FGD4Q96M96 766 aa14□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 GPHNQ9NQX3 736 aaPredicted RBP14□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 IL17RBQ9NRM6 502 aa14□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 CYP39A1Q9NYL5 469 aa14□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 COL6A3P12111 3177 aa13.99□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 ZNF536O15090 1300 aa13.99□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 RAD50Q92878 1312 aa13.99□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 PCP11498 1178 aaKnown RBP13.99□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 PDE1AP54750 535 aa13.99□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 ITGA7Q13683 1181 aa13.99□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 MFSD6Q6ZSS7 791 aa13.99□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 RILPL2Q969X0 211 aa13.99□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 TIFAQ96CG3 184 aa13.99□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 GAS2L1Q99501 681 aaPredicted RBP13.99□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.99□□□□□ -0.171e-6■■□□□ 12.3
CHKB-CPT1B-201ENST00000452668 TTYH1Q9H313 450 aaPredicted RBP13.99□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 HIPK3Q9H422 1215 aa13.99□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 RNF41Q9H4P4 317 aaPredicted RBP13.99□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 GPCPD1Q9NPB8 672 aa13.99□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 INCENPQ9NQS7 918 aa13.99□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 MSRAQ9UJ68 235 aa13.99□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 Q9Y3F1 56 aa13.99□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 LOC102724159A0A0B4J2E5 919 aa13.98□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.98□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 ADCY6O43306 1168 aa13.98□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 FGAP02671 866 aa13.98□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 FGBP02675 491 aa13.98□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 CSF2RAP15509 400 aa13.98□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 SLC16A2P36021 539 aa13.98□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 PWP2Q15269 919 aaKnown RBP13.98□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 MUM1L1Q5H9M0 696 aa13.98□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 VPS53Q5VIR6 699 aa13.98□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 FBXO16Q8IX29 292 aaPredicted RBP13.98□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 FAM126BQ8IXS8 530 aa13.98□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 RPUSD2Q8IZ73 545 aaKnown RBP13.98□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 SYMPKQ92797 1274 aaKnown RBP13.98□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 COL25A1Q9BXS0 654 aaPredicted RBP13.98□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 RANBP17Q9H2T7 1088 aaKnown RBP13.98□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 ZNF576Q9H609 170 aa13.98□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 TCP11L1Q9NUJ3 509 aa13.98□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 POLR3EQ9NVU0 708 aa13.98□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 FRMPD2Q68DX3 1309 aaPredicted RBP13.97□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 SUPT20HL2P0C7V6 817 aa13.97□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 SMPD1P17405 629 aa13.97□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 CALML3P27482 149 aa13.97□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 CPT1AP50416 773 aa13.97□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 NKX3-2P78367 333 aa13.97□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 IRX5P78411 483 aaPredicted RBP13.97□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 PDE4DQ08499 809 aa13.97□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 HDAC1Q13547 482 aaPredicted RBP13.97□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 AAMPQ13685 434 aa13.97□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 BAATQ14032 418 aaPredicted RBP13.97□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 RAB30Q15771 203 aa13.97□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 CCDC178Q5BJE1 867 aa13.97□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 TMEM240Q5SV17 173 aa13.97□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 ZNF365Q70YC5 407 aa13.97□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 ESR2Q92731 530 aa13.97□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 TTC14Q96N46 770 aa13.97□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 CRBNQ96SW2 442 aa13.97□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 TMEM47Q9BQJ4 181 aa13.97□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 KATNBL1Q9H079 304 aa13.97□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 RWDD1Q9H446 243 aaPredicted RBP13.97□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 IL23AQ9NPF7 189 aa13.97□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 GNEQ9Y223 722 aaKnown RBP13.97□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 CCDC171Q6TFL3 1326 aa13.96□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 ACRP10323 421 aa13.96□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 HSPD1P10809 573 aaKnown RBP13.96□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 CYP2C18P33260 490 aa13.96□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 HAND2P61296 217 aa13.96□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 DUSP28Q4G0W2 176 aa13.96□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 AKNAD1Q5T1N1 836 aa13.96□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 TTBK2Q6IQ55 1244 aa13.96□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 BTNL9Q6UXG8 535 aa13.96□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 RNF207Q6ZRF8 634 aa13.96□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 IQCA1Q86XH1 822 aa13.96□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 FAM227BQ96M60 508 aa13.96□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 WDR11Q9BZH6 1224 aa13.96□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 PDGFCQ9NRA1 345 aa13.96□□□□□ -0.17
CHKB-CPT1B-201ENST00000452668 ZMYM6O95789 1325 aa13.95□□□□□ -0.18
CHKB-CPT1B-201ENST00000452668 A0A0D9SFI3 127 aa13.95□□□□□ -0.18
CHKB-CPT1B-201ENST00000452668 ZNF213O14771 459 aa13.95□□□□□ -0.18
CHKB-CPT1B-201ENST00000452668 NKRFO15226 690 aaKnown RBP eCLIP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms