RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 USP31Q70CQ4 1352 aa20.65■□□□□ 0.9
PTPA-223ENST00000452489 MYO5AQ9Y4I1 1855 aaKnown RBP20.65■□□□□ 0.9
PTPA-223ENST00000452489 SMIM24O75264 130 aa20.65■□□□□ 0.9
PTPA-223ENST00000452489 FERP16591 822 aa20.65■□□□□ 0.9
PTPA-223ENST00000452489 MAP3K12Q12852 859 aa20.65■□□□□ 0.9
PTPA-223ENST00000452489 MEA1Q16626 185 aa20.65■□□□□ 0.9
PTPA-223ENST00000452489 ODF2Q5BJF6 829 aa20.65■□□□□ 0.9
PTPA-223ENST00000452489 RALYLQ86SE5 291 aaKnown RBP20.65■□□□□ 0.9
PTPA-223ENST00000452489 KCNJ14Q9UNX9 436 aa20.65■□□□□ 0.9
PTPA-223ENST00000452489 HYOU1Q9Y4L1 999 aa20.65■□□□□ 0.9
PTPA-223ENST00000452489 PRAMEF22A3QJZ6 481 aa20.65■□□□□ 0.9
PTPA-223ENST00000452489 DCDC2CA8MYV0 355 aa20.65■□□□□ 0.9
PTPA-223ENST00000452489 TACC1O75410 805 aa20.65■□□□□ 0.9
PTPA-223ENST00000452489 HOXB7P09629 217 aa20.65■□□□□ 0.9
PTPA-223ENST00000452489 PYGBP11216 843 aa20.65■□□□□ 0.9
PTPA-223ENST00000452489 ROR2Q01974 943 aaKnown RBP20.65■□□□□ 0.9
PTPA-223ENST00000452489 IMMTQ16891 758 aaKnown RBP20.65■□□□□ 0.9
PTPA-223ENST00000452489 FAM133BQ5BKY9 247 aaKnown RBP20.65■□□□□ 0.9
PTPA-223ENST00000452489 ERICH1Q86X53 443 aa20.65■□□□□ 0.9
PTPA-223ENST00000452489 OSBP2Q969R2 916 aa20.65■□□□□ 0.9
PTPA-223ENST00000452489 BLZF1Q9H2G9 400 aa20.65■□□□□ 0.9
PTPA-223ENST00000452489 SRPRBQ9Y5M8 271 aaKnown RBP20.65■□□□□ 0.9
PTPA-223ENST00000452489 FMN2Q9NZ56 1722 aa20.64■□□□□ 0.9
PTPA-223ENST00000452489 DPPA5A6NC42 116 aa20.64■□□□□ 0.9
PTPA-223ENST00000452489 B4DLN1 442 aa20.64■□□□□ 0.9
PTPA-223ENST00000452489 COQ9O75208 318 aa20.64■□□□□ 0.9
PTPA-223ENST00000452489 PAFAH1B1P43034 410 aa20.64■□□□□ 0.9
PTPA-223ENST00000452489 KCNJ2P63252 427 aa20.64■□□□□ 0.9
PTPA-223ENST00000452489 PTPN12Q05209 780 aaKnown RBP20.64■□□□□ 0.9
PTPA-223ENST00000452489 SPAG1Q07617 926 aa20.64■□□□□ 0.9
PTPA-223ENST00000452489 LTV1Q96GA3 475 aaPredicted RBP20.64■□□□□ 0.9
PTPA-223ENST00000452489 ARHGEF10LQ9HCE6 1279 aa20.64■□□□□ 0.9
PTPA-223ENST00000452489 ZPR1O75312 459 aa20.64■□□□□ 0.89
PTPA-223ENST00000452489 IGKV5-2P06315 115 aa20.64■□□□□ 0.89
PTPA-223ENST00000452489 SH3RF1Q7Z6J0 888 aa20.64■□□□□ 0.89
PTPA-223ENST00000452489 USHBP1Q8N6Y0 703 aa20.64■□□□□ 0.89
PTPA-223ENST00000452489 ZNF579Q8NAF0 562 aaKnown RBP20.64■□□□□ 0.89
PTPA-223ENST00000452489 NCOA7Q8NI08 942 aa20.64■□□□□ 0.89
PTPA-223ENST00000452489 ALS2CR12Q96Q35 445 aa20.64■□□□□ 0.89
PTPA-223ENST00000452489 GSDMAQ96QA5 445 aa20.64■□□□□ 0.89
PTPA-223ENST00000452489 MYL10Q9BUA6 226 aa20.64■□□□□ 0.89
PTPA-223ENST00000452489 TSGA10Q9BZW7 698 aa20.64■□□□□ 0.89
PTPA-223ENST00000452489 AGAP1Q9UPQ3 857 aa20.64■□□□□ 0.89
PTPA-223ENST00000452489 BCL9LQ86UU0 1499 aa20.63■□□□□ 0.89
PTPA-223ENST00000452489 A8MUI8 341 aa20.63■□□□□ 0.89
PTPA-223ENST00000452489 FGAP02671 866 aa20.63■□□□□ 0.89
PTPA-223ENST00000452489 TCP1P17987 556 aaKnown RBP20.63■□□□□ 0.89
PTPA-223ENST00000452489 IARSP41252 1262 aaKnown RBP20.63■□□□□ 0.89
PTPA-223ENST00000452489 KLK7P49862 253 aa20.63■□□□□ 0.89
PTPA-223ENST00000452489 PPP2R2AP63151 447 aa20.63■□□□□ 0.89
PTPA-223ENST00000452489 DIS3L2Q8IYB7 885 aaKnown RBP20.63■□□□□ 0.89
PTPA-223ENST00000452489 KCNMB3Q9NPA1 279 aa20.63■□□□□ 0.89
PTPA-223ENST00000452489 EVI5O60447 810 aa20.63■□□□□ 0.89
PTPA-223ENST00000452489 CDKL5O76039 1030 aa20.63■□□□□ 0.89
PTPA-223ENST00000452489 PLEKP08567 350 aaPredicted RBP20.63■□□□□ 0.89
PTPA-223ENST00000452489 PRLRP16471 622 aa20.63■□□□□ 0.89
PTPA-223ENST00000452489 ZNF268Q14587 947 aaPredicted RBP20.63■□□□□ 0.89
PTPA-223ENST00000452489 ANKRD20A2Q5SQ80 823 aa20.63■□□□□ 0.89
PTPA-223ENST00000452489 ANKRD20A1Q5TYW2 823 aa20.63■□□□□ 0.89
PTPA-223ENST00000452489 ANKRD20A3Q5VUR7 823 aa20.63■□□□□ 0.89
PTPA-223ENST00000452489 NELFBQ8WX92 580 aa20.63■□□□□ 0.89
PTPA-223ENST00000452489 COPRSQ9NQ92 184 aa20.63■□□□□ 0.89
PTPA-223ENST00000452489 STRN4Q9NRL3 753 aa20.63■□□□□ 0.89
PTPA-223ENST00000452489 SPDYE5A6NIY4 337 aa20.62■□□□□ 0.89
PTPA-223ENST00000452489 ORC4O43929 436 aa20.62■□□□□ 0.89
PTPA-223ENST00000452489 HSD17B3P37058 310 aa20.62■□□□□ 0.89
PTPA-223ENST00000452489 ZNF844Q08AG5 666 aa20.62■□□□□ 0.89
PTPA-223ENST00000452489 PAK1Q13153 545 aa20.62■□□□□ 0.89
PTPA-223ENST00000452489 NR5A1Q13285 461 aa20.62■□□□□ 0.89
PTPA-223ENST00000452489 ARMC9Q7Z3E5 817 aa20.62■□□□□ 0.89
PTPA-223ENST00000452489 IRF2BP1Q8IU81 584 aa20.62■□□□□ 0.89
PTPA-223ENST00000452489 CCDC197Q8NCU1 140 aa20.62■□□□□ 0.89
PTPA-223ENST00000452489 NEUROD6Q96NK8 337 aa20.62■□□□□ 0.89
PTPA-223ENST00000452489 RGL1Q9NZL6 768 aa20.62■□□□□ 0.89
PTPA-223ENST00000452489 RWDD2AQ9UIY3 292 aa20.62■□□□□ 0.89
PTPA-223ENST00000452489 CPDO75976 1380 aa20.62■□□□□ 0.89
PTPA-223ENST00000452489 RNF113AO15541 343 aaKnown RBP20.62■□□□□ 0.89
PTPA-223ENST00000452489 ALADP13716 330 aa20.62■□□□□ 0.89
PTPA-223ENST00000452489 GUCY1A2P33402 732 aa20.62■□□□□ 0.89
PTPA-223ENST00000452489 RFX5P48382 616 aaPredicted RBP20.62■□□□□ 0.89
PTPA-223ENST00000452489 GCLCP48506 637 aaPredicted RBP20.62■□□□□ 0.89
PTPA-223ENST00000452489 TUBP50607 506 aa20.62■□□□□ 0.89
PTPA-223ENST00000452489 SPATA21Q7Z572 469 aa20.62■□□□□ 0.89
PTPA-223ENST00000452489 SLC26A6Q9BXS9 759 aa20.62■□□□□ 0.89
PTPA-223ENST00000452489 SH2D4AQ9H788 454 aa20.62■□□□□ 0.89
PTPA-223ENST00000452489 NWD2Q9ULI1 1742 aa20.62■□□□□ 0.89
PTPA-223ENST00000452489 H0YGN5 161 aa20.61■□□□□ 0.89
PTPA-223ENST00000452489 IFIT3O14879 490 aaKnown RBP20.61■□□□□ 0.89
PTPA-223ENST00000452489 PAEPP09466 180 aa20.61■□□□□ 0.89
PTPA-223ENST00000452489 PARP1P09874 1014 aaKnown RBP20.61■□□□□ 0.89
PTPA-223ENST00000452489 FAM163BP0C2L3 166 aa20.61■□□□□ 0.89
PTPA-223ENST00000452489 HSPA9P38646 679 aaKnown RBP20.61■□□□□ 0.89
PTPA-223ENST00000452489 DNA2P51530 1060 aa20.61■□□□□ 0.89
PTPA-223ENST00000452489 ALDH5A1P51649 535 aaPredicted RBP20.61■□□□□ 0.89
PTPA-223ENST00000452489 NTRK3Q16288 839 aa20.61■□□□□ 0.89
PTPA-223ENST00000452489 MDM1Q8TC05 714 aa20.61■□□□□ 0.89
PTPA-223ENST00000452489 KCNV2Q8TDN2 545 aa20.61■□□□□ 0.89
PTPA-223ENST00000452489 PLCB1Q9NQ66 1216 aa20.61■□□□□ 0.89
PTPA-223ENST00000452489 NOVA2Q9UNW9 492 aaKnown RBP20.61■□□□□ 0.89
PTPA-223ENST00000452489 NFS1Q9Y697 457 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms