RNA–Protein interactions for RNA: ENST00000452193.5

SMARCA2-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3

Gene SMARCA2, Length 750 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-215ENST00000452193 VPS53Q5VIR6 699 aa13.75□□□□□ -0.21
SMARCA2-215ENST00000452193 B4GALNT3Q6L9W6 998 aa13.75□□□□□ -0.21
SMARCA2-215ENST00000452193 BTNL9Q6UXG8 535 aa13.75□□□□□ -0.21
SMARCA2-215ENST00000452193 KCTD1Q719H9 257 aa13.75□□□□□ -0.21
SMARCA2-215ENST00000452193 ANKRD33Q7Z3H0 272 aa13.75□□□□□ -0.21
SMARCA2-215ENST00000452193 CCDC144CPQ8IYA2 1237 aa13.75□□□□□ -0.21
SMARCA2-215ENST00000452193 FAM133AQ8N9E0 248 aa13.75□□□□□ -0.21
SMARCA2-215ENST00000452193 KLHDC9Q8NEP7 349 aa13.75□□□□□ -0.21
SMARCA2-215ENST00000452193 ESR2Q92731 530 aa13.75□□□□□ -0.21
SMARCA2-215ENST00000452193 FAM227BQ96M60 508 aa13.75□□□□□ -0.21
SMARCA2-215ENST00000452193 YTHDC1Q96MU7 727 aaKnown RBP13.75□□□□□ -0.21
SMARCA2-215ENST00000452193 OSBPL3Q9H4L5 887 aa13.75□□□□□ -0.21
SMARCA2-215ENST00000452193 DIAPH3Q9NSV4 1193 aa13.75□□□□□ -0.21
SMARCA2-215ENST00000452193 CTNNA3Q9UI47 895 aa13.75□□□□□ -0.21
SMARCA2-215ENST00000452193 CCPG1Q9ULG6 757 aa13.75□□□□□ -0.21
SMARCA2-215ENST00000452193 PRR12Q9ULL5 1215 aa13.75□□□□□ -0.21
SMARCA2-215ENST00000452193 A0A0G2JMZ2 1700 aa13.75□□□□□ -0.21
SMARCA2-215ENST00000452193 DNAH12Q6ZR08 3092 aa13.75□□□□□ -0.21
SMARCA2-215ENST00000452193 SYNRGQ9UMZ2 1314 aa13.74□□□□□ -0.21
SMARCA2-215ENST00000452193 KIAA0355O15063 1070 aa13.74□□□□□ -0.21
SMARCA2-215ENST00000452193 FOXP2O15409 715 aa13.74□□□□□ -0.21
SMARCA2-215ENST00000452193 PQBP1O60828 265 aaKnown RBP13.74□□□□□ -0.21
SMARCA2-215ENST00000452193 ICAM1P05362 532 aa13.74□□□□□ -0.21
SMARCA2-215ENST00000452193 SDSP20132 328 aa13.74□□□□□ -0.21
SMARCA2-215ENST00000452193 GJA9P57773 515 aa13.74□□□□□ -0.21
SMARCA2-215ENST00000452193 TNFAIP2Q03169 654 aa13.74□□□□□ -0.21
SMARCA2-215ENST00000452193 AKNAD1Q5T1N1 836 aa13.74□□□□□ -0.21
SMARCA2-215ENST00000452193 IQSEC1Q6DN90 963 aa13.74□□□□□ -0.21
SMARCA2-215ENST00000452193 SLC17A8Q8NDX2 589 aa13.74□□□□□ -0.21
SMARCA2-215ENST00000452193 BADQ92934 168 aa13.74□□□□□ -0.21
SMARCA2-215ENST00000452193 AGBL1Q96MI9 1066 aa13.74□□□□□ -0.21
SMARCA2-215ENST00000452193 MAF1Q9H063 256 aa13.74□□□□□ -0.21
SMARCA2-215ENST00000452193 AP5M1Q9H0R1 490 aa13.74□□□□□ -0.21
SMARCA2-215ENST00000452193 A1CFQ9NQ94 594 aaKnown RBP13.74□□□□□ -0.21
SMARCA2-215ENST00000452193 PDLIM7Q9NR12 457 aa13.74□□□□□ -0.21
SMARCA2-215ENST00000452193 STXBP5LQ9Y2K9 1186 aa13.74□□□□□ -0.21
SMARCA2-215ENST00000452193 RLFQ13129 1914 aa13.73□□□□□ -0.21
SMARCA2-215ENST00000452193 A0A0D9SFI3 127 aa13.73□□□□□ -0.21
SMARCA2-215ENST00000452193 NMT2O60551 498 aa13.73□□□□□ -0.21
SMARCA2-215ENST00000452193 NMIQ13287 307 aaPredicted RBP13.73□□□□□ -0.21
SMARCA2-215ENST00000452193 GPATCH4Q5T3I0 446 aaKnown RBP13.73□□□□□ -0.21
SMARCA2-215ENST00000452193 SYDE2Q5VT97 1194 aa13.73□□□□□ -0.21
SMARCA2-215ENST00000452193 IQCA1Q86XH1 822 aa13.73□□□□□ -0.21
SMARCA2-215ENST00000452193 TMEM47Q9BQJ4 181 aa13.73□□□□□ -0.21
SMARCA2-215ENST00000452193 UPF3AQ9H1J1 476 aaKnown RBP13.73□□□□□ -0.21
SMARCA2-215ENST00000452193 RYDENQ9NUL5 291 aaKnown RBP13.73□□□□□ -0.21
SMARCA2-215ENST00000452193 MTMR7Q9Y216 660 aa13.73□□□□□ -0.21
SMARCA2-215ENST00000452193 Q9Y3F1 56 aa13.73□□□□□ -0.21
SMARCA2-215ENST00000452193 MYH7P12883 1935 aa13.72□□□□□ -0.21
SMARCA2-215ENST00000452193 ZNF536O15090 1300 aa13.72□□□□□ -0.21
SMARCA2-215ENST00000452193 A0A0U1RQG5 324 aaPredicted RBP13.72□□□□□ -0.21
SMARCA2-215ENST00000452193 TLR3O15455 904 aaKnown RBP13.72□□□□□ -0.21
SMARCA2-215ENST00000452193 NKX3-2P78367 333 aa13.72□□□□□ -0.21
SMARCA2-215ENST00000452193 CCSAPQ6IQ19 270 aaPredicted RBP13.72□□□□□ -0.21
SMARCA2-215ENST00000452193 NSMFQ6X4W1 530 aa13.72□□□□□ -0.21
SMARCA2-215ENST00000452193 DGKHQ86XP1 1220 aa13.72□□□□□ -0.21
SMARCA2-215ENST00000452193 PIP4P2Q8N4L2 257 aa13.72□□□□□ -0.21
SMARCA2-215ENST00000452193 RANBP17Q9H2T7 1088 aaKnown RBP13.72□□□□□ -0.21
SMARCA2-215ENST00000452193 VTA1Q9NP79 307 aa13.72□□□□□ -0.21
SMARCA2-215ENST00000452193 INCENPQ9NQS7 918 aa13.72□□□□□ -0.21
SMARCA2-215ENST00000452193 MTMR10Q9NXD2 777 aa13.72□□□□□ -0.21
SMARCA2-215ENST00000452193 CYP39A1Q9NYL5 469 aa13.72□□□□□ -0.21
SMARCA2-215ENST00000452193 MYH8P13535 1937 aa13.72□□□□□ -0.21
SMARCA2-215ENST00000452193 TRIM43BA6NCK2 446 aa13.71□□□□□ -0.21
SMARCA2-215ENST00000452193 ASGR1P07306 291 aa13.71□□□□□ -0.21
SMARCA2-215ENST00000452193 SMAD3P84022 425 aaKnown RBP13.71□□□□□ -0.21
SMARCA2-215ENST00000452193 CNTN2Q02246 1040 aa13.71□□□□□ -0.21
SMARCA2-215ENST00000452193 FPGSQ05932 587 aa13.71□□□□□ -0.21
SMARCA2-215ENST00000452193 IMMTQ16891 758 aaKnown RBP13.71□□□□□ -0.21
SMARCA2-215ENST00000452193 BRDTQ58F21 947 aaPredicted RBP13.71□□□□□ -0.21
SMARCA2-215ENST00000452193 ZNF697Q5TEC3 545 aa13.71□□□□□ -0.21
SMARCA2-215ENST00000452193 PLEKHM2Q8IWE5 1019 aa13.71□□□□□ -0.21
SMARCA2-215ENST00000452193 TRIM43Q96BQ3 446 aaPredicted RBP13.71□□□□□ -0.21
SMARCA2-215ENST00000452193 SOWAHBA6NEL2 793 aa13.7□□□□□ -0.22
SMARCA2-215ENST00000452193 ARVCFO00192 962 aa13.7□□□□□ -0.22
SMARCA2-215ENST00000452193 TIMP1P01033 207 aa13.7□□□□□ -0.22
SMARCA2-215ENST00000452193 HAND2P61296 217 aa13.7□□□□□ -0.22
SMARCA2-215ENST00000452193 FAAP100Q0VG06 881 aa13.7□□□□□ -0.22
SMARCA2-215ENST00000452193 SHHQ15465 462 aa13.7□□□□□ -0.22
SMARCA2-215ENST00000452193 FSCN1Q16658 493 aaKnown RBP13.7□□□□□ -0.22
SMARCA2-215ENST00000452193 CWC27Q6UX04 472 aaKnown RBP13.7□□□□□ -0.22
SMARCA2-215ENST00000452193 ZNF589Q86UQ0 364 aaPredicted RBP13.7□□□□□ -0.22
SMARCA2-215ENST00000452193 ZNF579Q8NAF0 562 aaKnown RBP13.7□□□□□ -0.22
SMARCA2-215ENST00000452193 CHMP4CQ96CF2 233 aa13.7□□□□□ -0.22
SMARCA2-215ENST00000452193 KRT23Q9C075 422 aa13.7□□□□□ -0.22
SMARCA2-215ENST00000452193 CNNM2Q9H8M5 875 aa13.7□□□□□ -0.22
SMARCA2-215ENST00000452193 GPCPD1Q9NPB8 672 aa13.7□□□□□ -0.22
SMARCA2-215ENST00000452193 SZT2Q5T011 3432 aa13.7□□□□□ -0.22
SMARCA2-215ENST00000452193 WDR19Q8NEZ3 1342 aa13.69□□□□□ -0.22
SMARCA2-215ENST00000452193 GREB1LQ9C091 1923 aaPredicted RBP13.69□□□□□ -0.22
SMARCA2-215ENST00000452193 DYNC1LI2O43237 492 aaPredicted RBP13.69□□□□□ -0.22
SMARCA2-215ENST00000452193 PDHBP11177 359 aa13.69□□□□□ -0.22
SMARCA2-215ENST00000452193 SLC16A2P36021 539 aa13.69□□□□□ -0.22
SMARCA2-215ENST00000452193 CDK7P50613 346 aa13.69□□□□□ -0.22
SMARCA2-215ENST00000452193 ZNF543Q08ER8 600 aa13.69□□□□□ -0.22
SMARCA2-215ENST00000452193 PPIGQ13427 754 aaKnown RBP eCLIP13.69□□□□□ -0.22
SMARCA2-215ENST00000452193 KIAA1211Q6ZU35 1233 aa13.69□□□□□ -0.22
SMARCA2-215ENST00000452193 SH3RF1Q7Z6J0 888 aa13.69□□□□□ -0.22
SMARCA2-215ENST00000452193 TMEM199Q8N511 208 aa13.69□□□□□ -0.22
SMARCA2-215ENST00000452193 RGS22Q8NE09 1264 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms