RNA–Protein interactions for RNA: ENST00000451070.1

LINC01238-204, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 4

Gene LINC01238, Length 599 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-204ENST00000451070 ZNF697Q5TEC3 545 aa11.7□□□□□ -0.54
LINC01238-204ENST00000451070 TTBK2Q6IQ55 1244 aa11.7□□□□□ -0.54
LINC01238-204ENST00000451070 CCDC174Q6PII3 467 aa11.7□□□□□ -0.54
LINC01238-204ENST00000451070 PCSK9Q8NBP7 692 aaKnown RBP11.7□□□□□ -0.54
LINC01238-204ENST00000451070 TMEM39AQ9NV64 488 aa11.7□□□□□ -0.54
LINC01238-204ENST00000451070 ZBTB47Q9UFB7 747 aaPredicted RBP11.7□□□□□ -0.54
LINC01238-204ENST00000451070 TBX21Q9UL17 535 aa11.7□□□□□ -0.54
LINC01238-204ENST00000451070 MTMR7Q9Y216 660 aa11.7□□□□□ -0.54
LINC01238-204ENST00000451070 ZMYM6O95789 1325 aa11.69□□□□□ -0.54
LINC01238-204ENST00000451070 HSPD1P10809 573 aaKnown RBP11.69□□□□□ -0.54
LINC01238-204ENST00000451070 PTGS1P23219 599 aa11.69□□□□□ -0.54
LINC01238-204ENST00000451070 NMIQ13287 307 aaPredicted RBP11.69□□□□□ -0.54
LINC01238-204ENST00000451070 MCMDC2Q4G0Z9 681 aa11.69□□□□□ -0.54
LINC01238-204ENST00000451070 GNASQ5JWF2 1037 aa11.69□□□□□ -0.54
LINC01238-204ENST00000451070 BTNL9Q6UXG8 535 aa11.69□□□□□ -0.54
LINC01238-204ENST00000451070 DCAF4Q8WV16 495 aa11.69□□□□□ -0.54
LINC01238-204ENST00000451070 GLT1D1Q96MS3 346 aa11.69□□□□□ -0.54
LINC01238-204ENST00000451070 LNPKQ9C0E8 428 aa11.69□□□□□ -0.54
LINC01238-204ENST00000451070 RANBP17Q9H2T7 1088 aaKnown RBP11.69□□□□□ -0.54
LINC01238-204ENST00000451070 TTYH1Q9H313 450 aaPredicted RBP11.69□□□□□ -0.54
LINC01238-204ENST00000451070 SEMA6BQ9H3T3 888 aa11.69□□□□□ -0.54
LINC01238-204ENST00000451070 CYP39A1Q9NYL5 469 aa11.69□□□□□ -0.54
LINC01238-204ENST00000451070 GNEQ9Y223 722 aaKnown RBP11.69□□□□□ -0.54
LINC01238-204ENST00000451070 MROH7Q68CQ1 1323 aa11.68□□□□□ -0.54
LINC01238-204ENST00000451070 A0A0U1RQG5 324 aaPredicted RBP11.68□□□□□ -0.54
LINC01238-204ENST00000451070 ASB14A6NK59 587 aa11.68□□□□□ -0.54
LINC01238-204ENST00000451070 ARVCFO00192 962 aa11.68□□□□□ -0.54
LINC01238-204ENST00000451070 TIMP1P01033 207 aa11.68□□□□□ -0.54
LINC01238-204ENST00000451070 ICAM1P05362 532 aa11.68□□□□□ -0.54
LINC01238-204ENST00000451070 SLC16A2P36021 539 aa11.68□□□□□ -0.54
LINC01238-204ENST00000451070 BEX3Q00994 111 aa11.68□□□□□ -0.54
LINC01238-204ENST00000451070 TNFAIP2Q03169 654 aa11.68□□□□□ -0.54
LINC01238-204ENST00000451070 FPGSQ05932 587 aa11.68□□□□□ -0.54
LINC01238-204ENST00000451070 CCDC96Q2M329 555 aa11.68□□□□□ -0.54
LINC01238-204ENST00000451070 RRP12Q5JTH9 1297 aaKnown RBP11.68□□□□□ -0.54
LINC01238-204ENST00000451070 TMEM63BQ5T3F8 832 aa11.68□□□□□ -0.54
LINC01238-204ENST00000451070 TICAM2Q86XR7 235 aa11.68□□□□□ -0.54
LINC01238-204ENST00000451070 SMC5Q8IY18 1101 aa11.68□□□□□ -0.54
LINC01238-204ENST00000451070 RNPC3Q96LT9 517 aaKnown RBP11.68□□□□□ -0.54
LINC01238-204ENST00000451070 PURBQ96QR8 312 aaKnown RBP11.68□□□□□ -0.54
LINC01238-204ENST00000451070 CDX2Q99626 313 aaPredicted RBP11.68□□□□□ -0.54
LINC01238-204ENST00000451070 TMEM47Q9BQJ4 181 aa11.68□□□□□ -0.54
LINC01238-204ENST00000451070 SPC25Q9HBM1 224 aa11.68□□□□□ -0.54
LINC01238-204ENST00000451070 PDGFCQ9NRA1 345 aa11.68□□□□□ -0.54
LINC01238-204ENST00000451070 TOMM22Q9NS69 142 aa11.68□□□□□ -0.54
LINC01238-204ENST00000451070 TCP11L1Q9NUJ3 509 aa11.68□□□□□ -0.54
LINC01238-204ENST00000451070 CCPG1Q9ULG6 757 aa11.68□□□□□ -0.54
LINC01238-204ENST00000451070 PRUNE2Q8WUY3 3088 aa11.68□□□□□ -0.54
LINC01238-204ENST00000451070 LAMA4Q16363 1823 aa11.67□□□□□ -0.54
LINC01238-204ENST00000451070 CCDC171Q6TFL3 1326 aa11.67□□□□□ -0.54
LINC01238-204ENST00000451070 PDHBP11177 359 aa11.67□□□□□ -0.54
LINC01238-204ENST00000451070 TOP1P11387 765 aaKnown RBP11.67□□□□□ -0.54
LINC01238-204ENST00000451070 SMPD1P17405 629 aa11.67□□□□□ -0.54
LINC01238-204ENST00000451070 HAND2P61296 217 aa11.67□□□□□ -0.54
LINC01238-204ENST00000451070 SYDE2Q5VT97 1194 aa11.67□□□□□ -0.54
LINC01238-204ENST00000451070 MFSD5Q6N075 450 aa11.67□□□□□ -0.54
LINC01238-204ENST00000451070 TAPT1Q6NXT6 567 aa11.67□□□□□ -0.54
LINC01238-204ENST00000451070 NSMFQ6X4W1 530 aa11.67□□□□□ -0.54
LINC01238-204ENST00000451070 C16orf59Q7L2K0 433 aa11.67□□□□□ -0.54
LINC01238-204ENST00000451070 TLK2Q86UE8 772 aa11.67□□□□□ -0.54
LINC01238-204ENST00000451070 TBC1D10CQ8IV04 446 aa11.67□□□□□ -0.54
LINC01238-204ENST00000451070 FBXO16Q8IX29 292 aaPredicted RBP11.67□□□□□ -0.54
LINC01238-204ENST00000451070 FAM126BQ8IXS8 530 aa11.67□□□□□ -0.54
LINC01238-204ENST00000451070 SLC43A3Q8NBI5 491 aa11.67□□□□□ -0.54
LINC01238-204ENST00000451070 MORC4Q8TE76 937 aa11.67□□□□□ -0.54
LINC01238-204ENST00000451070 VTI1AQ96AJ9 217 aa11.67□□□□□ -0.54
LINC01238-204ENST00000451070 FRMPD2Q68DX3 1309 aaPredicted RBP11.66□□□□□ -0.54
LINC01238-204ENST00000451070 TRIM6-TRIM34B2RNG4 842 aa11.66□□□□□ -0.54
LINC01238-204ENST00000451070 NFIBO00712 420 aa11.66□□□□□ -0.54
LINC01238-204ENST00000451070 CD4P01730 458 aa11.66□□□□□ -0.54
LINC01238-204ENST00000451070 BAATQ14032 418 aaPredicted RBP11.66□□□□□ -0.54
LINC01238-204ENST00000451070 FSCN1Q16658 493 aaKnown RBP11.66□□□□□ -0.54
LINC01238-204ENST00000451070 CXCL17Q6UXB2 119 aa11.66□□□□□ -0.54
LINC01238-204ENST00000451070 NOL8Q76FK4 1167 aaKnown RBP11.66□□□□□ -0.54
LINC01238-204ENST00000451070 EEPD1Q7L9B9 569 aa11.66□□□□□ -0.54
LINC01238-204ENST00000451070 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.66□□□□□ -0.54
LINC01238-204ENST00000451070 GPCPD1Q9NPB8 672 aa11.66□□□□□ -0.54
LINC01238-204ENST00000451070 MYO9BQ13459 2157 aa11.65□□□□□ -0.54
LINC01238-204ENST00000451070 GRIN2DO15399 1336 aa11.65□□□□□ -0.54
LINC01238-204ENST00000451070 NEDD4P46934 1319 aa11.65□□□□□ -0.54
LINC01238-204ENST00000451070 DYNC1LI2O43237 492 aaPredicted RBP11.65□□□□□ -0.54
LINC01238-204ENST00000451070 IGHDP01880 384 aa11.65□□□□□ -0.54
LINC01238-204ENST00000451070 SNHG28P0DPA3 235 aa11.65□□□□□ -0.54
LINC01238-204ENST00000451070 CSF2RAP15509 400 aa11.65□□□□□ -0.54
LINC01238-204ENST00000451070 SDSP20132 328 aa11.65□□□□□ -0.54
LINC01238-204ENST00000451070 ZNF543Q08ER8 600 aa11.65□□□□□ -0.54
LINC01238-204ENST00000451070 TMEM240Q5SV17 173 aa11.65□□□□□ -0.54
LINC01238-204ENST00000451070 AKNAD1Q5T1N1 836 aa11.65□□□□□ -0.54
LINC01238-204ENST00000451070 IQSEC1Q6DN90 963 aa11.65□□□□□ -0.54
LINC01238-204ENST00000451070 B4GALNT3Q6L9W6 998 aa11.65□□□□□ -0.54
LINC01238-204ENST00000451070 PLEKHM2Q8IWE5 1019 aa11.65□□□□□ -0.54
LINC01238-204ENST00000451070 CLEC4DQ8WXI8 215 aa11.65□□□□□ -0.54
LINC01238-204ENST00000451070 MYLIPQ8WY64 445 aa11.65□□□□□ -0.54
LINC01238-204ENST00000451070 RILPL2Q969X0 211 aa11.65□□□□□ -0.54
LINC01238-204ENST00000451070 PPP1R12CQ9BZL4 782 aa11.65□□□□□ -0.54
LINC01238-204ENST00000451070 OSBPL3Q9H4L5 887 aa11.65□□□□□ -0.54
LINC01238-204ENST00000451070 VTA1Q9NP79 307 aa11.65□□□□□ -0.54
LINC01238-204ENST00000451070 TMEM265A0A087WTH1 108 aa11.64□□□□□ -0.55
LINC01238-204ENST00000451070 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.64□□□□□ -0.55
LINC01238-204ENST00000451070 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms