RNA–Protein interactions for RNA: ENST00000449879.5

RAB11FIP3-204, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-204ENST00000449879 GUCD1Q96NT3 240 aa19.56■□□□□ 0.72
RAB11FIP3-204ENST00000449879 TMEM47Q9BQJ4 181 aa19.56■□□□□ 0.72
RAB11FIP3-204ENST00000449879 UPF3AQ9H1J1 476 aaKnown RBP19.56■□□□□ 0.72
RAB11FIP3-204ENST00000449879 RWDD1Q9H446 243 aaPredicted RBP19.56■□□□□ 0.72
RAB11FIP3-204ENST00000449879 DDX49Q9Y6V7 483 aaKnown RBP19.56■□□□□ 0.72
RAB11FIP3-204ENST00000449879 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.55■□□□□ 0.72
RAB11FIP3-204ENST00000449879 TOP1P11387 765 aaKnown RBP19.55■□□□□ 0.72
RAB11FIP3-204ENST00000449879 IRX6P78412 446 aaPredicted RBP19.55■□□□□ 0.72
RAB11FIP3-204ENST00000449879 BEX3Q00994 111 aa19.55■□□□□ 0.72
RAB11FIP3-204ENST00000449879 FPGSQ05932 587 aa19.55■□□□□ 0.72
RAB11FIP3-204ENST00000449879 TICAM2Q86XR7 235 aa19.55■□□□□ 0.72
RAB11FIP3-204ENST00000449879 GPCPD1Q9NPB8 672 aa19.55■□□□□ 0.72
RAB11FIP3-204ENST00000449879 CYP39A1Q9NYL5 469 aa19.55■□□□□ 0.72
RAB11FIP3-204ENST00000449879 FRMPD2Q68DX3 1309 aaPredicted RBP19.54■□□□□ 0.72
RAB11FIP3-204ENST00000449879 ICAM1P05362 532 aa19.54■□□□□ 0.72
RAB11FIP3-204ENST00000449879 CDK7P50613 346 aa19.54■□□□□ 0.72
RAB11FIP3-204ENST00000449879 MFSD6Q6ZSS7 791 aa19.54■□□□□ 0.72
RAB11FIP3-204ENST00000449879 EEPD1Q7L9B9 569 aa19.54■□□□□ 0.72
RAB11FIP3-204ENST00000449879 SMC5Q8IY18 1101 aa19.54■□□□□ 0.72
RAB11FIP3-204ENST00000449879 RNPC3Q96LT9 517 aaKnown RBP19.54■□□□□ 0.72
RAB11FIP3-204ENST00000449879 PURBQ96QR8 312 aaKnown RBP19.54■□□□□ 0.72
RAB11FIP3-204ENST00000449879 TCP11L1Q9NUJ3 509 aa19.54■□□□□ 0.72
RAB11FIP3-204ENST00000449879 LAMA2P24043 3122 aaKnown RBP19.54■□□□□ 0.72
RAB11FIP3-204ENST00000449879 CCDC171Q6TFL3 1326 aa19.53■□□□□ 0.72
RAB11FIP3-204ENST00000449879 A0A0U1RQG5 324 aaPredicted RBP19.53■□□□□ 0.72
RAB11FIP3-204ENST00000449879 CTAGE5O15320 804 aa19.53■□□□□ 0.72
RAB11FIP3-204ENST00000449879 AKNAD1Q5T1N1 836 aa19.53■□□□□ 0.72
RAB11FIP3-204ENST00000449879 SYDE2Q5VT97 1194 aa19.53■□□□□ 0.72
RAB11FIP3-204ENST00000449879 BTNL9Q6UXG8 535 aa19.53■□□□□ 0.72
RAB11FIP3-204ENST00000449879 RANBP17Q9H2T7 1088 aaKnown RBP19.53■□□□□ 0.72
RAB11FIP3-204ENST00000449879 PDGFCQ9NRA1 345 aa19.53■□□□□ 0.72
RAB11FIP3-204ENST00000449879 ASTN1O14525 1302 aa19.52■□□□□ 0.72
RAB11FIP3-204ENST00000449879 MROH7Q68CQ1 1323 aa19.52■□□□□ 0.72
RAB11FIP3-204ENST00000449879 ARVCFO00192 962 aa19.52■□□□□ 0.72
RAB11FIP3-204ENST00000449879 DYNC1LI2O43237 492 aaPredicted RBP19.52■□□□□ 0.72
RAB11FIP3-204ENST00000449879 TIMP1P01033 207 aa19.52■□□□□ 0.72
RAB11FIP3-204ENST00000449879 IGHDP01880 384 aa19.52■□□□□ 0.72
RAB11FIP3-204ENST00000449879 SDSP20132 328 aa19.52■□□□□ 0.72
RAB11FIP3-204ENST00000449879 SMAD3P84022 425 aaKnown RBP19.52■□□□□ 0.72
RAB11FIP3-204ENST00000449879 CHD1LQ86WJ1 897 aa19.52■□□□□ 0.72
RAB11FIP3-204ENST00000449879 PLEKHM2Q8IWE5 1019 aa19.52■□□□□ 0.72
RAB11FIP3-204ENST00000449879 AP5M1Q9H0R1 490 aa19.52■□□□□ 0.72
RAB11FIP3-204ENST00000449879 SEMA6BQ9H3T3 888 aa19.52■□□□□ 0.72
RAB11FIP3-204ENST00000449879 TBX21Q9UL17 535 aa19.52■□□□□ 0.72
RAB11FIP3-204ENST00000449879 GNEQ9Y223 722 aaKnown RBP19.52■□□□□ 0.72
RAB11FIP3-204ENST00000449879 ZMYM6O95789 1325 aa19.51■□□□□ 0.71
RAB11FIP3-204ENST00000449879 SMPD1P17405 629 aa19.51■□□□□ 0.71
RAB11FIP3-204ENST00000449879 PTGS1P23219 599 aa19.51■□□□□ 0.71
RAB11FIP3-204ENST00000449879 MFAP1P55081 439 aaKnown RBP19.51■□□□□ 0.71
RAB11FIP3-204ENST00000449879 BAATQ14032 418 aaPredicted RBP19.51■□□□□ 0.71
RAB11FIP3-204ENST00000449879 IQSEC1Q6DN90 963 aa19.51■□□□□ 0.71
RAB11FIP3-204ENST00000449879 CXCL17Q6UXB2 119 aa19.51■□□□□ 0.71
RAB11FIP3-204ENST00000449879 TLK2Q86UE8 772 aa19.51■□□□□ 0.71
RAB11FIP3-204ENST00000449879 FBXO16Q8IX29 292 aaPredicted RBP19.51■□□□□ 0.71
RAB11FIP3-204ENST00000449879 TTC14Q96N46 770 aa19.51■□□□□ 0.71
RAB11FIP3-204ENST00000449879 A0A0C4DFX4 3053 aa19.5■□□□□ 0.71
RAB11FIP3-204ENST00000449879 NFIBO00712 420 aa19.5■□□□□ 0.71
RAB11FIP3-204ENST00000449879 PDHBP11177 359 aa19.5■□□□□ 0.71
RAB11FIP3-204ENST00000449879 NKX3-2P78367 333 aa19.5■□□□□ 0.71
RAB11FIP3-204ENST00000449879 FSCN1Q16658 493 aaKnown RBP19.5■□□□□ 0.71
RAB11FIP3-204ENST00000449879 TMEM63BQ5T3F8 832 aa19.5■□□□□ 0.71
RAB11FIP3-204ENST00000449879 TAPT1Q6NXT6 567 aa19.5■□□□□ 0.71
RAB11FIP3-204ENST00000449879 TBC1D10CQ8IV04 446 aa19.5■□□□□ 0.71
RAB11FIP3-204ENST00000449879 CDX2Q99626 313 aaPredicted RBP19.5■□□□□ 0.71
RAB11FIP3-204ENST00000449879 PTPDC1A2A3K4 754 aa19.49■□□□□ 0.71
RAB11FIP3-204ENST00000449879 ZNF213O14771 459 aa19.49■□□□□ 0.71
RAB11FIP3-204ENST00000449879 TLR3O15455 904 aaKnown RBP19.49■□□□□ 0.71
RAB11FIP3-204ENST00000449879 PCP11498 1178 aaKnown RBP19.49■□□□□ 0.71
RAB11FIP3-204ENST00000449879 NUCB1Q02818 461 aa19.49■□□□□ 0.71
RAB11FIP3-204ENST00000449879 MFSD5Q6N075 450 aa19.49■□□□□ 0.71
RAB11FIP3-204ENST00000449879 CWC27Q6UX04 472 aaKnown RBP19.49■□□□□ 0.71
RAB11FIP3-204ENST00000449879 KIAA1211Q6ZU35 1233 aa19.49■□□□□ 0.71
RAB11FIP3-204ENST00000449879 FAM126BQ8IXS8 530 aa19.49■□□□□ 0.71
RAB11FIP3-204ENST00000449879 ZKSCAN3Q9BRR0 538 aa19.49■□□□□ 0.71
RAB11FIP3-204ENST00000449879 PPP1R12CQ9BZL4 782 aa19.49■□□□□ 0.71
RAB11FIP3-204ENST00000449879 RNF41Q9H4P4 317 aaPredicted RBP19.49■□□□□ 0.71
RAB11FIP3-204ENST00000449879 ADD3Q9UEY8 706 aaKnown RBP19.49■□□□□ 0.71
RAB11FIP3-204ENST00000449879 ZEB2O60315 1214 aa19.48■□□□□ 0.71
RAB11FIP3-204ENST00000449879 ZNF543Q08ER8 600 aa19.48■□□□□ 0.71
RAB11FIP3-204ENST00000449879 ESR2Q92731 530 aa19.48■□□□□ 0.71
RAB11FIP3-204ENST00000449879 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.48■□□□□ 0.71
RAB11FIP3-204ENST00000449879 TTYH1Q9H313 450 aaPredicted RBP19.48■□□□□ 0.71
RAB11FIP3-204ENST00000449879 OSBPL3Q9H4L5 887 aa19.48■□□□□ 0.71
RAB11FIP3-204ENST00000449879 VTA1Q9NP79 307 aa19.48■□□□□ 0.71
RAB11FIP3-204ENST00000449879 DIAPH3Q9NSV4 1193 aa19.48■□□□□ 0.71
RAB11FIP3-204ENST00000449879 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.47■□□□□ 0.71
RAB11FIP3-204ENST00000449879 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.47■□□□□ 0.71
RAB11FIP3-204ENST00000449879 CABYRO75952 493 aa19.47■□□□□ 0.71
RAB11FIP3-204ENST00000449879 CSF2RAP15509 400 aa19.47■□□□□ 0.71
RAB11FIP3-204ENST00000449879 CALML3P27482 149 aa19.47■□□□□ 0.71
RAB11FIP3-204ENST00000449879 ALDH5A1P51649 535 aaPredicted RBP19.47■□□□□ 0.71
RAB11FIP3-204ENST00000449879 ITGA7Q13683 1181 aa19.47■□□□□ 0.71
RAB11FIP3-204ENST00000449879 TMEM199Q8N511 208 aa19.47■□□□□ 0.71
RAB11FIP3-204ENST00000449879 MORC4Q8TE76 937 aa19.47■□□□□ 0.71
RAB11FIP3-204ENST00000449879 Q9Y3F1 56 aa19.47■□□□□ 0.71
RAB11FIP3-204ENST00000449879 NEDD4P46934 1319 aa19.47■□□□□ 0.71
RAB11FIP3-204ENST00000449879 CUL9Q8IWT3 2517 aa19.46■□□□□ 0.71
RAB11FIP3-204ENST00000449879 CD4P01730 458 aa19.46■□□□□ 0.71
RAB11FIP3-204ENST00000449879 GOLGA8HP0CJ92 632 aa19.46■□□□□ 0.71
RAB11FIP3-204ENST00000449879 PPIGQ13427 754 aaKnown RBP eCLIP19.46■□□□□ 0.712e-8■□□□□ 11.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms