RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 SMPD1P17405 629 aa15.22■□□□□ 0.03
AC004540.1-204ENST00000449537 EVX2Q03828 476 aa15.22■□□□□ 0.03
AC004540.1-204ENST00000449537 MTX1Q13505 466 aa15.22■□□□□ 0.03
AC004540.1-204ENST00000449537 IQSEC1Q6DN90 963 aa15.22■□□□□ 0.03
AC004540.1-204ENST00000449537 TMCO2Q7Z6W1 182 aaPredicted RBP15.22■□□□□ 0.03
AC004540.1-204ENST00000449537 ATOH1Q92858 354 aaPredicted RBP15.22■□□□□ 0.03
AC004540.1-204ENST00000449537 CCDC17Q96LX7 622 aa15.22■□□□□ 0.03
AC004540.1-204ENST00000449537 CRBNQ96SW2 442 aa15.22■□□□□ 0.03
AC004540.1-204ENST00000449537 SLF1Q9BQI6 1058 aa15.22■□□□□ 0.03
AC004540.1-204ENST00000449537 FBXO40Q9UH90 709 aa15.22■□□□□ 0.03
AC004540.1-204ENST00000449537 LINC01553A4QN01 128 aa15.21■□□□□ 0.03
AC004540.1-204ENST00000449537 TMEM221A6NGB7 291 aa15.21■□□□□ 0.03
AC004540.1-204ENST00000449537 M0R296 226 aa15.21■□□□□ 0.03
AC004540.1-204ENST00000449537 ZBED4O75132 1171 aa15.21■□□□□ 0.03
AC004540.1-204ENST00000449537 WDR5P61964 334 aaKnown RBP15.21■□□□□ 0.03
AC004540.1-204ENST00000449537 BFSP2Q13515 415 aa15.21■□□□□ 0.03
AC004540.1-204ENST00000449537 PTPROQ16827 1216 aa15.21■□□□□ 0.03
AC004540.1-204ENST00000449537 TMED8Q6PL24 325 aaPredicted RBP15.21■□□□□ 0.03
AC004540.1-204ENST00000449537 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.21■□□□□ 0.03
AC004540.1-204ENST00000449537 RNF135Q8IUD6 432 aa15.21■□□□□ 0.03
AC004540.1-204ENST00000449537 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.21■□□□□ 0.03
AC004540.1-204ENST00000449537 PABPC5Q96DU9 382 aaKnown RBP15.21■□□□□ 0.03
AC004540.1-204ENST00000449537 MRPL38Q96DV4 380 aaKnown RBP15.21■□□□□ 0.03
AC004540.1-204ENST00000449537 POP1Q99575 1024 aaKnown RBP15.21■□□□□ 0.03
AC004540.1-204ENST00000449537 TET1Q8NFU7 2136 aa15.2■□□□□ 0.02
AC004540.1-204ENST00000449537 MAGEB6P1A0A0J9YX57 407 aa15.2■□□□□ 0.02
AC004540.1-204ENST00000449537 ASB14A6NK59 587 aa15.2■□□□□ 0.02
AC004540.1-204ENST00000449537 ATP2A1O14983 1001 aa15.2■□□□□ 0.02
AC004540.1-204ENST00000449537 PTGS1P23219 599 aa15.2■□□□□ 0.02
AC004540.1-204ENST00000449537 CNTN2Q02246 1040 aa15.2■□□□□ 0.02
AC004540.1-204ENST00000449537 TRIM67Q6ZTA4 783 aa15.2■□□□□ 0.02
AC004540.1-204ENST00000449537 PRPF38AQ8NAV1 312 aaKnown RBP15.2■□□□□ 0.02
AC004540.1-204ENST00000449537 CHST13Q8NET6 341 aa15.2■□□□□ 0.02
AC004540.1-204ENST00000449537 FBXO22Q8NEZ5 403 aa15.2■□□□□ 0.02
AC004540.1-204ENST00000449537 DYNLL2Q96FJ2 89 aa15.2■□□□□ 0.02
AC004540.1-204ENST00000449537 RIOK1Q9BRS2 568 aaKnown RBP15.2■□□□□ 0.02
AC004540.1-204ENST00000449537 CRNKL1Q9BZJ0 848 aaKnown RBP15.2■□□□□ 0.02
AC004540.1-204ENST00000449537 KANSL2Q9H9L4 492 aa15.2■□□□□ 0.02
AC004540.1-204ENST00000449537 GPR108Q9NPR9 543 aa15.2■□□□□ 0.02
AC004540.1-204ENST00000449537 POLR3EQ9NVU0 708 aa15.2■□□□□ 0.02
AC004540.1-204ENST00000449537 GJB5O95377 273 aa15.19■□□□□ 0.02
AC004540.1-204ENST00000449537 GNAI3P08754 354 aa15.19■□□□□ 0.02
AC004540.1-204ENST00000449537 TNNI3KQ59H18 835 aa15.19■□□□□ 0.02
AC004540.1-204ENST00000449537 FAM47CQ5HY64 1035 aa15.19■□□□□ 0.02
AC004540.1-204ENST00000449537 FBXL6Q8N531 539 aa15.19■□□□□ 0.02
AC004540.1-204ENST00000449537 BANK1Q8NDB2 785 aa15.19■□□□□ 0.02
AC004540.1-204ENST00000449537 RAVER2Q9HCJ3 691 aaKnown RBP15.19■□□□□ 0.02
AC004540.1-204ENST00000449537 PDGFCQ9NRA1 345 aa15.19■□□□□ 0.02
AC004540.1-204ENST00000449537 FPGT-TNNI3KV9GXZ4 949 aa15.19■□□□□ 0.02
AC004540.1-204ENST00000449537 TRIOO75962 3097 aa15.19■□□□□ 0.02
AC004540.1-204ENST00000449537 CYP2D6P10635 497 aa15.18■□□□□ 0.02
AC004540.1-204ENST00000449537 DEFB103AP81534 67 aa15.18■□□□□ 0.02
AC004540.1-204ENST00000449537 LRRFIP1Q32MZ4 808 aaKnown RBP15.18■□□□□ 0.02
AC004540.1-204ENST00000449537 ALDH1L2Q3SY69 923 aa15.18■□□□□ 0.02
AC004540.1-204ENST00000449537 TIGD5Q53EQ6 642 aa15.18■□□□□ 0.02
AC004540.1-204ENST00000449537 GPHNQ9NQX3 736 aaPredicted RBP15.18■□□□□ 0.02
AC004540.1-204ENST00000449537 CACNA1HO95180 2353 aa15.18■□□□□ 0.02
AC004540.1-204ENST00000449537 USP17L12C9JPN9 530 aa15.17■□□□□ 0.02
AC004540.1-204ENST00000449537 USP17L21D6R901 530 aa15.17■□□□□ 0.02
AC004540.1-204ENST00000449537 MYL3P08590 195 aa15.17■□□□□ 0.02
AC004540.1-204ENST00000449537 ID4P47928 161 aa15.17■□□□□ 0.02
AC004540.1-204ENST00000449537 SMAD2Q15796 467 aaKnown RBP15.17■□□□□ 0.02
AC004540.1-204ENST00000449537 NBPF20Q3BBV1 942 aa15.17■□□□□ 0.02
AC004540.1-204ENST00000449537 TCEAL5Q5H9L2 206 aa15.17■□□□□ 0.02
AC004540.1-204ENST00000449537 FAM133AQ8N9E0 248 aa15.17■□□□□ 0.02
AC004540.1-204ENST00000449537 NUP88Q99567 741 aaPredicted RBP15.17■□□□□ 0.02
AC004540.1-204ENST00000449537 MTG1Q9BT17 334 aaPredicted RBP15.17■□□□□ 0.02
AC004540.1-204ENST00000449537 DCP1AQ9NPI6 582 aaPredicted RBP15.17■□□□□ 0.02
AC004540.1-204ENST00000449537 SMC4Q9NTJ3 1288 aa15.17■□□□□ 0.02
AC004540.1-204ENST00000449537 CLDND1Q9NY35 253 aa15.17■□□□□ 0.02
AC004540.1-204ENST00000449537 RIF1Q5UIP0 2472 aaKnown RBP15.17■□□□□ 0.02
AC004540.1-204ENST00000449537 ABHD14A-ACY1A0A1B0GW23 586 aa15.16■□□□□ 0.02
AC004540.1-204ENST00000449537 SOWAHBA6NEL2 793 aa15.16■□□□□ 0.02
AC004540.1-204ENST00000449537 PROB1E7EW31 1015 aa15.16■□□□□ 0.02
AC004540.1-204ENST00000449537 NCK2O43639 380 aa15.16■□□□□ 0.02
AC004540.1-204ENST00000449537 CDK8P49336 464 aa15.16■□□□□ 0.02
AC004540.1-204ENST00000449537 PURAQ00577 322 aaKnown RBP15.16■□□□□ 0.02
AC004540.1-204ENST00000449537 COL19A1Q14993 1142 aa15.16■□□□□ 0.02
AC004540.1-204ENST00000449537 TMEM63BQ5T3F8 832 aa15.16■□□□□ 0.02
AC004540.1-204ENST00000449537 TAPT1Q6NXT6 567 aa15.16■□□□□ 0.02
AC004540.1-204ENST00000449537 FAM117BQ6P1L5 589 aa15.16■□□□□ 0.02
AC004540.1-204ENST00000449537 KIAA1211Q6ZU35 1233 aa15.16■□□□□ 0.02
AC004540.1-204ENST00000449537 EEPD1Q7L9B9 569 aa15.16■□□□□ 0.02
AC004540.1-204ENST00000449537 C17orf80Q9BSJ5 609 aa15.16■□□□□ 0.02
AC004540.1-204ENST00000449537 API5Q9BZZ5 524 aaKnown RBP15.16■□□□□ 0.02
AC004540.1-204ENST00000449537 NOD1Q9Y239 953 aa15.16■□□□□ 0.02
AC004540.1-204ENST00000449537 CACNA1BQ00975 2339 aa15.16■□□□□ 0.02
AC004540.1-204ENST00000449537 PTPRSQ13332 1948 aa15.15■□□□□ 0.02
AC004540.1-204ENST00000449537 SIP14410 1827 aa15.15■□□□□ 0.02
AC004540.1-204ENST00000449537 NFRKBQ6P4R8 1299 aa15.15■□□□□ 0.02
AC004540.1-204ENST00000449537 CNKSR3Q6P9H4 555 aa15.15■□□□□ 0.02
AC004540.1-204ENST00000449537 SDR42E1Q8WUS8 393 aa15.15■□□□□ 0.02
AC004540.1-204ENST00000449537 ANTXR1Q9H6X2 564 aa15.15■□□□□ 0.02
AC004540.1-204ENST00000449537 ALG13Q9NP73 1137 aaKnown RBP15.15■□□□□ 0.02
AC004540.1-204ENST00000449537 NOB1Q9ULX3 412 aaKnown RBP15.15■□□□□ 0.02
AC004540.1-204ENST00000449537 TRPC6Q9Y210 931 aa15.15■□□□□ 0.02
AC004540.1-204ENST00000449537 INSL6Q9Y581 213 aa15.15■□□□□ 0.02
AC004540.1-204ENST00000449537 TRIP12Q14669 1992 aaPredicted RBP15.15■□□□□ 0.02
AC004540.1-204ENST00000449537 C5orf42Q9H799 3197 aa15.14■□□□□ 0.01
AC004540.1-204ENST00000449537 CCER2I3L3R5 266 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms