RNA–Protein interactions for RNA: ENST00000449508.1

TOM1-211, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-211ENST00000449508 CCSAPQ6IQ19 270 aaPredicted RBP16.13■□□□□ 0.17
TOM1-211ENST00000449508 NSMFQ6X4W1 530 aa16.13■□□□□ 0.17
TOM1-211ENST00000449508 NOL8Q76FK4 1167 aaKnown RBP16.13■□□□□ 0.17
TOM1-211ENST00000449508 ESR2Q92731 530 aa16.13■□□□□ 0.17
TOM1-211ENST00000449508 GLT1D1Q96MS3 346 aa16.13■□□□□ 0.17
TOM1-211ENST00000449508 KATNBL1Q9H079 304 aa16.13■□□□□ 0.17
TOM1-211ENST00000449508 RANBP17Q9H2T7 1088 aaKnown RBP16.13■□□□□ 0.17
TOM1-211ENST00000449508 TMEM39AQ9NV64 488 aa16.13■□□□□ 0.17
TOM1-211ENST00000449508 CYP39A1Q9NYL5 469 aa16.13■□□□□ 0.17
TOM1-211ENST00000449508 SUPT16HQ9Y5B9 1047 aaKnown RBP16.13■□□□□ 0.17
TOM1-211ENST00000449508 DCDC2CA8MYV0 355 aa16.12■□□□□ 0.17
TOM1-211ENST00000449508 ASGR1P07306 291 aa16.12■□□□□ 0.17
TOM1-211ENST00000449508 PDHBP11177 359 aa16.12■□□□□ 0.17
TOM1-211ENST00000449508 RAG1P15918 1043 aa16.12■□□□□ 0.17
TOM1-211ENST00000449508 CST5P28325 142 aaPredicted RBP16.12■□□□□ 0.17
TOM1-211ENST00000449508 TNFAIP2Q03169 654 aa16.12■□□□□ 0.17
TOM1-211ENST00000449508 SHHQ15465 462 aa16.12■□□□□ 0.17
TOM1-211ENST00000449508 TBC1D10CQ8IV04 446 aa16.12■□□□□ 0.17
TOM1-211ENST00000449508 TOX2Q96NM4 488 aa16.12■□□□□ 0.17
TOM1-211ENST00000449508 ZKSCAN3Q9BRR0 538 aa16.12■□□□□ 0.17
TOM1-211ENST00000449508 UPF3AQ9H1J1 476 aaKnown RBP16.12■□□□□ 0.17
TOM1-211ENST00000449508 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.11■□□□□ 0.17
TOM1-211ENST00000449508 ITGB8P26012 769 aa16.11■□□□□ 0.17
TOM1-211ENST00000449508 FAAP100Q0VG06 881 aa16.11■□□□□ 0.17
TOM1-211ENST00000449508 ANKRD33Q7Z3H0 272 aa16.11■□□□□ 0.17
TOM1-211ENST00000449508 PURBQ96QR8 312 aaKnown RBP16.11■□□□□ 0.17
TOM1-211ENST00000449508 DDX49Q9Y6V7 483 aaKnown RBP16.11■□□□□ 0.17
TOM1-211ENST00000449508 ELP1O95163 1332 aa16.11■□□□□ 0.17
TOM1-211ENST00000449508 KIAA0355O15063 1070 aa16.1■□□□□ 0.17
TOM1-211ENST00000449508 BEX3Q00994 111 aa16.1■□□□□ 0.17
TOM1-211ENST00000449508 ZNF543Q08ER8 600 aa16.1■□□□□ 0.17
TOM1-211ENST00000449508 BAATQ14032 418 aaPredicted RBP16.1■□□□□ 0.17
TOM1-211ENST00000449508 C9orf50Q5SZB4 431 aa16.1■□□□□ 0.17
TOM1-211ENST00000449508 EEPD1Q7L9B9 569 aa16.1■□□□□ 0.17
TOM1-211ENST00000449508 DGKHQ86XP1 1220 aa16.1■□□□□ 0.17
TOM1-211ENST00000449508 MTMR10Q9NXD2 777 aa16.1■□□□□ 0.17
TOM1-211ENST00000449508 ASTN1O14525 1302 aa16.1■□□□□ 0.17
TOM1-211ENST00000449508 NEDD4P46934 1319 aa16.1■□□□□ 0.17
TOM1-211ENST00000449508 PTPDC1A2A3K4 754 aa16.09■□□□□ 0.17
TOM1-211ENST00000449508 KDM4AO75164 1064 aa16.09■□□□□ 0.17
TOM1-211ENST00000449508 SNHG28P0DPA3 235 aa16.09■□□□□ 0.17
TOM1-211ENST00000449508 CDK7P50613 346 aa16.09■□□□□ 0.17
TOM1-211ENST00000449508 IMMTQ16891 758 aaKnown RBP16.09■□□□□ 0.17
TOM1-211ENST00000449508 CCDC178Q5BJE1 867 aa16.09■□□□□ 0.17
TOM1-211ENST00000449508 IQSEC1Q6DN90 963 aa16.09■□□□□ 0.17
TOM1-211ENST00000449508 IQCA1Q86XH1 822 aa16.09■□□□□ 0.17
TOM1-211ENST00000449508 DSCC1Q9BVC3 393 aa16.09■□□□□ 0.17
TOM1-211ENST00000449508 AP5M1Q9H0R1 490 aa16.09■□□□□ 0.17
TOM1-211ENST00000449508 PDGFCQ9NRA1 345 aa16.09■□□□□ 0.17
TOM1-211ENST00000449508 ADD3Q9UEY8 706 aaKnown RBP16.09■□□□□ 0.17
TOM1-211ENST00000449508 PNMA2Q9UL42 364 aa16.09■□□□□ 0.17
TOM1-211ENST00000449508 LCTP09848 1927 aa16.08■□□□□ 0.16
TOM1-211ENST00000449508 A0A0U1RQG5 324 aaPredicted RBP16.08■□□□□ 0.16
TOM1-211ENST00000449508 ARVCFO00192 962 aa16.08■□□□□ 0.16
TOM1-211ENST00000449508 NFIBO00712 420 aa16.08■□□□□ 0.16
TOM1-211ENST00000449508 CTAGE5O15320 804 aa16.08■□□□□ 0.16
TOM1-211ENST00000449508 DYNC1LI2O43237 492 aaPredicted RBP16.08■□□□□ 0.16
TOM1-211ENST00000449508 GOLGA8HP0CJ92 632 aa16.08■□□□□ 0.16
TOM1-211ENST00000449508 SMPD1P17405 629 aa16.08■□□□□ 0.16
TOM1-211ENST00000449508 NT5C2P49902 561 aa16.08■□□□□ 0.16
TOM1-211ENST00000449508 GPATCH4Q5T3I0 446 aaKnown RBP16.08■□□□□ 0.16
TOM1-211ENST00000449508 TAPT1Q6NXT6 567 aa16.08■□□□□ 0.16
TOM1-211ENST00000449508 KIAA1211Q6ZU35 1233 aa16.08■□□□□ 0.16
TOM1-211ENST00000449508 FBXO16Q8IX29 292 aaPredicted RBP16.08■□□□□ 0.16
TOM1-211ENST00000449508 SLC17A8Q8NDX2 589 aa16.08■□□□□ 0.16
TOM1-211ENST00000449508 CTNNA3Q9UI47 895 aa16.08■□□□□ 0.16
TOM1-211ENST00000449508 GNEQ9Y223 722 aaKnown RBP16.08■□□□□ 0.16
TOM1-211ENST00000449508 MROH7Q68CQ1 1323 aa16.08■□□□□ 0.16
TOM1-211ENST00000449508 LAMA4Q16363 1823 aa16.08■□□□□ 0.16
TOM1-211ENST00000449508 B4E1Z4 1266 aa16.07■□□□□ 0.16
TOM1-211ENST00000449508 CALML3P27482 149 aa16.07■□□□□ 0.16
TOM1-211ENST00000449508 NKX3-2P78367 333 aa16.07■□□□□ 0.16
TOM1-211ENST00000449508 FPGSQ05932 587 aa16.07■□□□□ 0.16
TOM1-211ENST00000449508 FAM109BQ6ICB4 259 aaPredicted RBP16.07■□□□□ 0.16
TOM1-211ENST00000449508 RNF207Q6ZRF8 634 aa16.07■□□□□ 0.16
TOM1-211ENST00000449508 TLK2Q86UE8 772 aa16.07■□□□□ 0.16
TOM1-211ENST00000449508 PNMA1Q8ND90 353 aa16.07■□□□□ 0.16
TOM1-211ENST00000449508 MORC4Q8TE76 937 aa16.07■□□□□ 0.16
TOM1-211ENST00000449508 ZSCAN10Q96SZ4 725 aaPredicted RBP16.07■□□□□ 0.16
TOM1-211ENST00000449508 UBA5Q9GZZ9 404 aa16.07■□□□□ 0.16
TOM1-211ENST00000449508 KAT14Q9H8E8 782 aa16.07■□□□□ 0.16
TOM1-211ENST00000449508 VTA1Q9NP79 307 aa16.07■□□□□ 0.16
TOM1-211ENST00000449508 ZSWIM5Q9P217 1185 aa16.07■□□□□ 0.16
TOM1-211ENST00000449508 ZEB2O60315 1214 aa16.06■□□□□ 0.16
TOM1-211ENST00000449508 TIMP1P01033 207 aa16.06■□□□□ 0.16
TOM1-211ENST00000449508 PTGS1P23219 599 aa16.06■□□□□ 0.16
TOM1-211ENST00000449508 PDE4AP27815 886 aa16.06■□□□□ 0.16
TOM1-211ENST00000449508 ALDH5A1P51649 535 aaPredicted RBP16.06■□□□□ 0.16
TOM1-211ENST00000449508 EPHB4P54760 987 aa16.06■□□□□ 0.16
TOM1-211ENST00000449508 FSCN1Q16658 493 aaKnown RBP16.06■□□□□ 0.16
TOM1-211ENST00000449508 TMEM63BQ5T3F8 832 aa16.06■□□□□ 0.16
TOM1-211ENST00000449508 CXCL17Q6UXB2 119 aa16.06■□□□□ 0.16
TOM1-211ENST00000449508 CLEC4DQ8WXI8 215 aa16.06■□□□□ 0.16
TOM1-211ENST00000449508 FAM161BQ96MY7 647 aa16.06■□□□□ 0.16
TOM1-211ENST00000449508 KRT23Q9C075 422 aa16.06■□□□□ 0.16
TOM1-211ENST00000449508 CPVLQ9H3G5 476 aa16.06■□□□□ 0.16
TOM1-211ENST00000449508 STXBP5LQ9Y2K9 1186 aa16.06■□□□□ 0.16
TOM1-211ENST00000449508 Q9Y3F1 56 aa16.06■□□□□ 0.16
TOM1-211ENST00000449508 LRRC37A2A6NM11 1700 aa16.05■□□□□ 0.16
TOM1-211ENST00000449508 LAMA2P24043 3122 aaKnown RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms