RNA–Protein interactions for RNA: ENST00000449389.1

SRRT-205, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-205ENST00000449389 ELP1O95163 1332 aa12.71□□□□□ -0.37
SRRT-205ENST00000449389 NEDD4P46934 1319 aa12.71□□□□□ -0.37
SRRT-205ENST00000449389 FRMPD2Q68DX3 1309 aaPredicted RBP12.71□□□□□ -0.37
SRRT-205ENST00000449389 TRIM43BA6NCK2 446 aa12.71□□□□□ -0.37
SRRT-205ENST00000449389 MYADML2A6NDP7 307 aa12.71□□□□□ -0.37
SRRT-205ENST00000449389 DCDC2CA8MYV0 355 aa12.71□□□□□ -0.37
SRRT-205ENST00000449389 KIAA0355O15063 1070 aa12.71□□□□□ -0.37
SRRT-205ENST00000449389 ADCY6O43306 1168 aa12.71□□□□□ -0.37
SRRT-205ENST00000449389 PQBP1O60828 265 aaKnown RBP12.71□□□□□ -0.37
SRRT-205ENST00000449389 PDHBP11177 359 aa12.71□□□□□ -0.37
SRRT-205ENST00000449389 CCDC178Q5BJE1 867 aa12.71□□□□□ -0.37
SRRT-205ENST00000449389 ANKRD33Q7Z3H0 272 aa12.71□□□□□ -0.37
SRRT-205ENST00000449389 BADQ92934 168 aa12.71□□□□□ -0.37
SRRT-205ENST00000449389 TRIM43Q96BQ3 446 aaPredicted RBP12.71□□□□□ -0.37
SRRT-205ENST00000449389 GPCPD1Q9NPB8 672 aa12.71□□□□□ -0.37
SRRT-205ENST00000449389 MROH7Q68CQ1 1323 aa12.7□□□□□ -0.38
SRRT-205ENST00000449389 ASGR1P07306 291 aa12.7□□□□□ -0.38
SRRT-205ENST00000449389 SNHG28P0DPA3 235 aa12.7□□□□□ -0.38
SRRT-205ENST00000449389 NKX3-2P78367 333 aa12.7□□□□□ -0.38
SRRT-205ENST00000449389 TNFAIP2Q03169 654 aa12.7□□□□□ -0.38
SRRT-205ENST00000449389 ZNF543Q08ER8 600 aa12.7□□□□□ -0.38
SRRT-205ENST00000449389 GNASQ5JWF2 1037 aa12.7□□□□□ -0.38
SRRT-205ENST00000449389 IQCA1Q86XH1 822 aa12.7□□□□□ -0.38
SRRT-205ENST00000449389 DGKHQ86XP1 1220 aa12.7□□□□□ -0.38
SRRT-205ENST00000449389 DSCC1Q9BVC3 393 aa12.7□□□□□ -0.38
SRRT-205ENST00000449389 TMEM39AQ9NV64 488 aa12.7□□□□□ -0.38
SRRT-205ENST00000449389 ADD3Q9UEY8 706 aaKnown RBP12.7□□□□□ -0.38
SRRT-205ENST00000449389 SUPT16HQ9Y5B9 1047 aaKnown RBP12.7□□□□□ -0.38
SRRT-205ENST00000449389 ASTN1O14525 1302 aa12.69□□□□□ -0.38
SRRT-205ENST00000449389 WDR19Q8NEZ3 1342 aa12.69□□□□□ -0.38
SRRT-205ENST00000449389 LOC102724159A0A0B4J2E5 919 aa12.69□□□□□ -0.38
SRRT-205ENST00000449389 A0A0U1RQG5 324 aaPredicted RBP12.69□□□□□ -0.38
SRRT-205ENST00000449389 RAG1P15918 1043 aa12.69□□□□□ -0.38
SRRT-205ENST00000449389 PWP2Q15269 919 aaKnown RBP12.69□□□□□ -0.38
SRRT-205ENST00000449389 SHHQ15465 462 aa12.69□□□□□ -0.38
SRRT-205ENST00000449389 IMMTQ16891 758 aaKnown RBP12.69□□□□□ -0.38
SRRT-205ENST00000449389 GPATCH4Q5T3I0 446 aaKnown RBP12.69□□□□□ -0.38
SRRT-205ENST00000449389 FAM109BQ6ICB4 259 aaPredicted RBP12.69□□□□□ -0.38
SRRT-205ENST00000449389 NOL8Q76FK4 1167 aaKnown RBP12.69□□□□□ -0.38
SRRT-205ENST00000449389 Q7L0L9 218 aa12.69□□□□□ -0.38
SRRT-205ENST00000449389 MORC4Q8TE76 937 aa12.69□□□□□ -0.38
SRRT-205ENST00000449389 VTA1Q9NP79 307 aa12.69□□□□□ -0.38
SRRT-205ENST00000449389 CTNNA3Q9UI47 895 aa12.69□□□□□ -0.38
SRRT-205ENST00000449389 MCM3APO60318 1980 aa12.69□□□□□ -0.38
SRRT-205ENST00000449389 LAMA2P24043 3122 aaKnown RBP12.68□□□□□ -0.38
SRRT-205ENST00000449389 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.68□□□□□ -0.38
SRRT-205ENST00000449389 NFIBO00712 420 aa12.68□□□□□ -0.38
SRRT-205ENST00000449389 CTAGE5O15320 804 aa12.68□□□□□ -0.38
SRRT-205ENST00000449389 KDM4AO75164 1064 aa12.68□□□□□ -0.38
SRRT-205ENST00000449389 ITGB8P26012 769 aa12.68□□□□□ -0.38
SRRT-205ENST00000449389 IRX5P78411 483 aaPredicted RBP12.68□□□□□ -0.38
SRRT-205ENST00000449389 FAAP100Q0VG06 881 aa12.68□□□□□ -0.38
SRRT-205ENST00000449389 BAATQ14032 418 aaPredicted RBP12.68□□□□□ -0.38
SRRT-205ENST00000449389 C9orf50Q5SZB4 431 aa12.68□□□□□ -0.38
SRRT-205ENST00000449389 IQSEC1Q6DN90 963 aa12.68□□□□□ -0.38
SRRT-205ENST00000449389 TLK2Q86UE8 772 aa12.68□□□□□ -0.38
SRRT-205ENST00000449389 PNMA1Q8ND90 353 aa12.68□□□□□ -0.38
SRRT-205ENST00000449389 VTI1AQ96AJ9 217 aa12.68□□□□□ -0.38
SRRT-205ENST00000449389 ZKSCAN3Q9BRR0 538 aa12.68□□□□□ -0.38
SRRT-205ENST00000449389 AP5M1Q9H0R1 490 aa12.68□□□□□ -0.38
SRRT-205ENST00000449389 MTMR10Q9NXD2 777 aa12.68□□□□□ -0.38
SRRT-205ENST00000449389 GNEQ9Y223 722 aaKnown RBP12.68□□□□□ -0.38
SRRT-205ENST00000449389 Q9Y3F1 56 aa12.68□□□□□ -0.38
SRRT-205ENST00000449389 LAMA4Q16363 1823 aa12.67□□□□□ -0.38
SRRT-205ENST00000449389 PTPDC1A2A3K4 754 aa12.67□□□□□ -0.38
SRRT-205ENST00000449389 B4E1Z4 1266 aa12.67□□□□□ -0.38
SRRT-205ENST00000449389 ARVCFO00192 962 aa12.67□□□□□ -0.38
SRRT-205ENST00000449389 ZEB2O60315 1214 aa12.67□□□□□ -0.38
SRRT-205ENST00000449389 CABYRO75952 493 aa12.67□□□□□ -0.38
SRRT-205ENST00000449389 SMPD1P17405 629 aa12.67□□□□□ -0.38
SRRT-205ENST00000449389 CDK7P50613 346 aa12.67□□□□□ -0.38
SRRT-205ENST00000449389 ALDH5A1P51649 535 aaPredicted RBP12.67□□□□□ -0.38
SRRT-205ENST00000449389 BEX3Q00994 111 aa12.67□□□□□ -0.38
SRRT-205ENST00000449389 FPGSQ05932 587 aa12.67□□□□□ -0.38
SRRT-205ENST00000449389 FSCN1Q16658 493 aaKnown RBP12.67□□□□□ -0.38
SRRT-205ENST00000449389 TTC22Q5TAA0 569 aa12.67□□□□□ -0.38
SRRT-205ENST00000449389 TAPT1Q6NXT6 567 aa12.67□□□□□ -0.38
SRRT-205ENST00000449389 RNF207Q6ZRF8 634 aa12.67□□□□□ -0.38
SRRT-205ENST00000449389 FBXO16Q8IX29 292 aaPredicted RBP12.67□□□□□ -0.38
SRRT-205ENST00000449389 CLEC4DQ8WXI8 215 aa12.67□□□□□ -0.38
SRRT-205ENST00000449389 ANKS1AQ92625 1134 aa12.67□□□□□ -0.38
SRRT-205ENST00000449389 ZSCAN10Q96SZ4 725 aaPredicted RBP12.67□□□□□ -0.38
SRRT-205ENST00000449389 MPHOSPH6Q99547 160 aaKnown RBP12.67□□□□□ -0.38
SRRT-205ENST00000449389 KRT23Q9C075 422 aa12.67□□□□□ -0.38
SRRT-205ENST00000449389 KAT14Q9H8E8 782 aa12.67□□□□□ -0.38
SRRT-205ENST00000449389 CNNM2Q9H8M5 875 aa12.67□□□□□ -0.38
SRRT-205ENST00000449389 PDGFCQ9NRA1 345 aa12.67□□□□□ -0.38
SRRT-205ENST00000449389 TBX21Q9UL17 535 aa12.67□□□□□ -0.38
SRRT-205ENST00000449389 STXBP5LQ9Y2K9 1186 aa12.67□□□□□ -0.38
SRRT-205ENST00000449389 DDX49Q9Y6V7 483 aaKnown RBP12.67□□□□□ -0.38
SRRT-205ENST00000449389 LRRC37A2A6NM11 1700 aa12.67□□□□□ -0.38
SRRT-205ENST00000449389 RAD50Q92878 1312 aa12.66□□□□□ -0.38
SRRT-205ENST00000449389 TLR3O15455 904 aaKnown RBP12.66□□□□□ -0.38
SRRT-205ENST00000449389 DYNC1LI2O43237 492 aaPredicted RBP12.66□□□□□ -0.38
SRRT-205ENST00000449389 TIMP1P01033 207 aa12.66□□□□□ -0.38
SRRT-205ENST00000449389 GOLGA8HP0CJ92 632 aa12.66□□□□□ -0.38
SRRT-205ENST00000449389 PDE4AP27815 886 aa12.66□□□□□ -0.38
SRRT-205ENST00000449389 SLC30A10Q6XR72 485 aa12.66□□□□□ -0.38
SRRT-205ENST00000449389 KIAA1211Q6ZU35 1233 aa12.66□□□□□ -0.38
SRRT-205ENST00000449389 EEPD1Q7L9B9 569 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms