RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 KANK3Q6NY19 840 aa6.32□□□□□ -1.4
CDC42BPA-209ENST00000448940 PRR23CQ6ZRP0 262 aa6.32□□□□□ -1.4
CDC42BPA-209ENST00000448940 CSGALNACT1Q8TDX6 532 aa6.32□□□□□ -1.4
CDC42BPA-209ENST00000448940 N4BP2L2Q92802 583 aaPredicted RBP6.32□□□□□ -1.4
CDC42BPA-209ENST00000448940 ZDHHC15Q96MV8 337 aa6.32□□□□□ -1.4
CDC42BPA-209ENST00000448940 TRERF1Q96PN7 1200 aa6.32□□□□□ -1.4
CDC42BPA-209ENST00000448940 SLC4A9Q96Q91 983 aa6.32□□□□□ -1.4
CDC42BPA-209ENST00000448940 LRRC2Q9BYS8 371 aa6.32□□□□□ -1.4
CDC42BPA-209ENST00000448940 KDM6AO15550 1401 aaPredicted RBP6.32□□□□□ -1.4
CDC42BPA-209ENST00000448940 LTBP3Q9NS15 1303 aa6.32□□□□□ -1.4
CDC42BPA-209ENST00000448940 QRICH2Q9H0J4 1663 aa6.32□□□□□ -1.4
CDC42BPA-209ENST00000448940 EIF2AK2P19525 551 aaKnown RBP6.32□□□□□ -1.4
CDC42BPA-209ENST00000448940 ALDH7A1P49419 539 aaKnown RBP6.32□□□□□ -1.4
CDC42BPA-209ENST00000448940 PI16Q6UXB8 463 aa6.32□□□□□ -1.4
CDC42BPA-209ENST00000448940 TSG101Q99816 390 aa6.32□□□□□ -1.4
CDC42BPA-209ENST00000448940 INO80BQ9C086 356 aaPredicted RBP6.32□□□□□ -1.4
CDC42BPA-209ENST00000448940 CLGNO14967 610 aa6.32□□□□□ -1.4
CDC42BPA-209ENST00000448940 STRNO43815 780 aa6.32□□□□□ -1.4
CDC42BPA-209ENST00000448940 TFDP1Q14186 410 aa6.32□□□□□ -1.4
CDC42BPA-209ENST00000448940 RAB30Q15771 203 aa6.32□□□□□ -1.4
CDC42BPA-209ENST00000448940 LETM2Q2VYF4 491 aa6.32□□□□□ -1.4
CDC42BPA-209ENST00000448940 KCNV1Q6PIU1 500 aa6.32□□□□□ -1.4
CDC42BPA-209ENST00000448940 ATRIPQ8WXE1 791 aa6.32□□□□□ -1.4
CDC42BPA-209ENST00000448940 DYNLL2Q96FJ2 89 aa6.32□□□□□ -1.4
CDC42BPA-209ENST00000448940 ARHGAP9Q9BRR9 750 aa6.32□□□□□ -1.4
CDC42BPA-209ENST00000448940 ADGRB1O14514 1584 aa6.32□□□□□ -1.4
CDC42BPA-209ENST00000448940 PRRG1O14668 218 aa6.32□□□□□ -1.4
CDC42BPA-209ENST00000448940 CTNNB1P35222 781 aa6.32□□□□□ -1.4
CDC42BPA-209ENST00000448940 AMPD2Q01433 879 aa6.32□□□□□ -1.4
CDC42BPA-209ENST00000448940 MAEAQ7L5Y9 396 aa6.32□□□□□ -1.4
CDC42BPA-209ENST00000448940 HAUS7Q99871 368 aa6.32□□□□□ -1.4
CDC42BPA-209ENST00000448940 DBNLQ9UJU6 430 aaKnown RBP6.32□□□□□ -1.4
CDC42BPA-209ENST00000448940 GMEB2Q9UKD1 530 aa6.32□□□□□ -1.4
CDC42BPA-209ENST00000448940 GNRH1P01148 92 aa6.32□□□□□ -1.4
CDC42BPA-209ENST00000448940 FGBP02675 491 aa6.32□□□□□ -1.4
CDC42BPA-209ENST00000448940 EPC1Q9H2F5 836 aa6.32□□□□□ -1.4
CDC42BPA-209ENST00000448940 ITSN1Q15811 1721 aa6.32□□□□□ -1.4
CDC42BPA-209ENST00000448940 F5H6K3 240 aa6.32□□□□□ -1.4
CDC42BPA-209ENST00000448940 ARID4AP29374 1257 aaPredicted RBP6.32□□□□□ -1.4
CDC42BPA-209ENST00000448940 KLRC3Q07444 240 aa6.32□□□□□ -1.4
CDC42BPA-209ENST00000448940 DACT2Q5SW24 774 aa6.32□□□□□ -1.4
CDC42BPA-209ENST00000448940 RNF219Q5W0B1 726 aaPredicted RBP6.32□□□□□ -1.4
CDC42BPA-209ENST00000448940 SPRYD7Q5W111 196 aa6.32□□□□□ -1.4
CDC42BPA-209ENST00000448940 DHX32Q7L7V1 743 aaKnown RBP6.32□□□□□ -1.4
CDC42BPA-209ENST00000448940 RMDN3Q96TC7 470 aa6.32□□□□□ -1.4
CDC42BPA-209ENST00000448940 XPNPEP3Q9NQH7 507 aa6.32□□□□□ -1.4
CDC42BPA-209ENST00000448940 CFAP45Q9UL16 551 aa6.32□□□□□ -1.4
CDC42BPA-209ENST00000448940 V9GY48 417 aaPredicted RBP6.32□□□□□ -1.4
CDC42BPA-209ENST00000448940 ZBTB7BO15156 539 aaPredicted RBP6.31□□□□□ -1.4
CDC42BPA-209ENST00000448940 HSPD1P10809 573 aaKnown RBP6.31□□□□□ -1.4
CDC42BPA-209ENST00000448940 PLA2G4DQ86XP0 818 aa6.31□□□□□ -1.4
CDC42BPA-209ENST00000448940 DCAF4Q8WV16 495 aa6.31□□□□□ -1.4
CDC42BPA-209ENST00000448940 ZSCAN10Q96SZ4 725 aaPredicted RBP6.31□□□□□ -1.4
CDC42BPA-209ENST00000448940 PYM1Q9BRP8 204 aaKnown RBP6.31□□□□□ -1.4
CDC42BPA-209ENST00000448940 ABCC12Q96J65 1359 aa6.31□□□□□ -1.4
CDC42BPA-209ENST00000448940 DDX11L8A8MPP1 907 aa6.31□□□□□ -1.4
CDC42BPA-209ENST00000448940 FOXN1O15353 648 aa6.31□□□□□ -1.4
CDC42BPA-209ENST00000448940 CSF1RP07333 972 aa6.31□□□□□ -1.4
CDC42BPA-209ENST00000448940 TXNP10599 105 aaKnown RBP6.31□□□□□ -1.4
CDC42BPA-209ENST00000448940 EEF2P13639 858 aaKnown RBP6.31□□□□□ -1.4
CDC42BPA-209ENST00000448940 ZNF18P17022 549 aa6.31□□□□□ -1.4
CDC42BPA-209ENST00000448940 BACE1P56817 501 aa6.31□□□□□ -1.4
CDC42BPA-209ENST00000448940 VEPH1Q14D04 833 aa6.31□□□□□ -1.4
CDC42BPA-209ENST00000448940 TTC22Q5TAA0 569 aa6.31□□□□□ -1.4
CDC42BPA-209ENST00000448940 HS2ST1Q7LGA3 356 aa6.31□□□□□ -1.4
CDC42BPA-209ENST00000448940 KRT25Q7Z3Z0 450 aa6.31□□□□□ -1.4
CDC42BPA-209ENST00000448940 FBXO33Q7Z6M2 555 aa6.31□□□□□ -1.4
CDC42BPA-209ENST00000448940 RYBPQ8N488 228 aaPredicted RBP6.31□□□□□ -1.4
CDC42BPA-209ENST00000448940 DEPTORQ8TB45 409 aa6.31□□□□□ -1.4
CDC42BPA-209ENST00000448940 SLC7A3Q8WY07 619 aa6.31□□□□□ -1.4
CDC42BPA-209ENST00000448940 PI4K2BG5E9Z4 385 aa6.31□□□□□ -1.4
CDC42BPA-209ENST00000448940 GOLGA8HP0CJ92 632 aa6.31□□□□□ -1.4
CDC42BPA-209ENST00000448940 CCL5P13501 91 aa6.31□□□□□ -1.4
CDC42BPA-209ENST00000448940 PI4K2BQ8TCG2 481 aa6.31□□□□□ -1.4
CDC42BPA-209ENST00000448940 RPGRIP1Q96KN7 1286 aa6.31□□□□□ -1.4
CDC42BPA-209ENST00000448940 EVA1BQ9NVM1 165 aa6.31□□□□□ -1.4
CDC42BPA-209ENST00000448940 NRKQ7Z2Y5 1582 aa6.31□□□□□ -1.4
CDC42BPA-209ENST00000448940 ZNF142P52746 1687 aaPredicted RBP6.31□□□□□ -1.4
CDC42BPA-209ENST00000448940 C2CD2LO14523 706 aa6.31□□□□□ -1.4
CDC42BPA-209ENST00000448940 XPOTO43592 962 aaKnown RBP6.31□□□□□ -1.4
CDC42BPA-209ENST00000448940 GUCY1B3Q02153 619 aa6.31□□□□□ -1.4
CDC42BPA-209ENST00000448940 MAP2K5Q13163 448 aa6.31□□□□□ -1.4
CDC42BPA-209ENST00000448940 GIMAP6Q6P9H5 292 aa6.31□□□□□ -1.4
CDC42BPA-209ENST00000448940 LCORLQ8N3X6 602 aa6.31□□□□□ -1.4
CDC42BPA-209ENST00000448940 RIPOR2Q9Y4F9 1068 aa6.31□□□□□ -1.4
CDC42BPA-209ENST00000448940 CEMIPQ8WUJ3 1361 aa6.31□□□□□ -1.4
CDC42BPA-209ENST00000448940 TNFAIP2Q03169 654 aa6.31□□□□□ -1.4
CDC42BPA-209ENST00000448940 CLUL1Q15846 466 aa6.31□□□□□ -1.4
CDC42BPA-209ENST00000448940 CHST13Q8NET6 341 aa6.31□□□□□ -1.4
CDC42BPA-209ENST00000448940 SCFD2Q8WU76 684 aa6.31□□□□□ -1.4
CDC42BPA-209ENST00000448940 BCL2L12Q9HB09 334 aa6.31□□□□□ -1.4
CDC42BPA-209ENST00000448940 CAP2P40123 477 aa6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 HDAC1Q13547 482 aaPredicted RBP6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 STAG1Q8WVM7 1258 aa6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 TNKSO95271 1327 aa6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 PITPNM2Q9BZ72 1349 aa6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 GOLGA6CA6NDK9 693 aa6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 GOLGA6BA6NDN3 693 aa6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 SPTLC1O15269 473 aa6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 OATP04181 439 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms