RNA–Protein interactions for RNA: ENST00000447995.2

PTPN12-208, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-208ENST00000447995 ABCC12Q96J65 1359 aa4.78□□□□□ -1.64
PTPN12-208ENST00000447995 GLI3P10071 1580 aa4.78□□□□□ -1.64
PTPN12-208ENST00000447995 UBR2Q8IWV8 1755 aa4.78□□□□□ -1.64
PTPN12-208ENST00000447995 A0A0D9SFI3 127 aa4.78□□□□□ -1.64
PTPN12-208ENST00000447995 MEGF11A6BM72 1044 aa4.78□□□□□ -1.64
PTPN12-208ENST00000447995 TAF5LO75529 589 aa4.78□□□□□ -1.64
PTPN12-208ENST00000447995 TRPA1O75762 1119 aa4.78□□□□□ -1.64
PTPN12-208ENST00000447995 TIAF1O95411 115 aa4.78□□□□□ -1.64
PTPN12-208ENST00000447995 F13A1P00488 732 aa4.78□□□□□ -1.64
PTPN12-208ENST00000447995 F13BP05160 661 aa4.78□□□□□ -1.64
PTPN12-208ENST00000447995 ZFYP08048 801 aaPredicted RBP4.78□□□□□ -1.64
PTPN12-208ENST00000447995 SYT1P21579 422 aa4.78□□□□□ -1.64
PTPN12-208ENST00000447995 RPS6KB1P23443 525 aa4.78□□□□□ -1.64
PTPN12-208ENST00000447995 GJB2P29033 226 aa4.78□□□□□ -1.64
PTPN12-208ENST00000447995 UBE2HP62256 183 aa4.78□□□□□ -1.64
PTPN12-208ENST00000447995 FOXO4P98177 505 aa4.78□□□□□ -1.64
PTPN12-208ENST00000447995 TCIRG1Q13488 830 aa4.78□□□□□ -1.64
PTPN12-208ENST00000447995 CCDC57Q2TAC2 916 aa4.78□□□□□ -1.64
PTPN12-208ENST00000447995 TAF7LQ5H9L4 462 aa4.78□□□□□ -1.64
PTPN12-208ENST00000447995 CCDC183Q5T5S1 534 aa4.78□□□□□ -1.64
PTPN12-208ENST00000447995 LCE1DQ5T752 114 aa4.78□□□□□ -1.64
PTPN12-208ENST00000447995 GAS2L3Q86XJ1 694 aa4.78□□□□□ -1.64
PTPN12-208ENST00000447995 CCDC83Q8IWF9 413 aa4.78□□□□□ -1.64
PTPN12-208ENST00000447995 KBTBD3Q8NAB2 608 aa4.78□□□□□ -1.64
PTPN12-208ENST00000447995 KLHDC4Q8TBB5 520 aa4.78□□□□□ -1.64
PTPN12-208ENST00000447995 DDX54Q8TDD1 881 aaKnown RBP4.78□□□□□ -1.64
PTPN12-208ENST00000447995 SLC7A3Q8WY07 619 aa4.78□□□□□ -1.64
PTPN12-208ENST00000447995 PBXIP1Q96AQ6 731 aa4.78□□□□□ -1.64
PTPN12-208ENST00000447995 FAM227BQ96M60 508 aa4.78□□□□□ -1.64
PTPN12-208ENST00000447995 DNAJC2Q99543 621 aaKnown RBP4.78□□□□□ -1.64
PTPN12-208ENST00000447995 ISCA1Q9BUE6 129 aa4.78□□□□□ -1.64
PTPN12-208ENST00000447995 TSPY26PQ9H489 355 aa4.78□□□□□ -1.64
PTPN12-208ENST00000447995 DBNLQ9UJU6 430 aaKnown RBP4.78□□□□□ -1.64
PTPN12-208ENST00000447995 ZNF609O15014 1411 aa4.78□□□□□ -1.64
PTPN12-208ENST00000447995 NUP188Q5SRE5 1749 aa4.77□□□□□ -1.65
PTPN12-208ENST00000447995 ABCA3Q99758 1704 aa4.77□□□□□ -1.65
PTPN12-208ENST00000447995 CDHR2Q9BYE9 1310 aa4.77□□□□□ -1.65
PTPN12-208ENST00000447995 XIRP1Q702N8 1843 aaKnown RBP4.77□□□□□ -1.65
PTPN12-208ENST00000447995 SPEF2Q9C093 1822 aa4.77□□□□□ -1.65
PTPN12-208ENST00000447995 LRP6O75581 1613 aa4.77□□□□□ -1.65
PTPN12-208ENST00000447995 NHSL1Q5SYE7 1610 aa4.77□□□□□ -1.65
PTPN12-208ENST00000447995 VPS37CA5D8V6 355 aaPredicted RBP4.77□□□□□ -1.65
PTPN12-208ENST00000447995 PDE2AO00408 941 aaPredicted RBP4.77□□□□□ -1.65
PTPN12-208ENST00000447995 PRNPP04156 253 aa4.77□□□□□ -1.65
PTPN12-208ENST00000447995 A1BGP04217 495 aa4.77□□□□□ -1.65
PTPN12-208ENST00000447995 PCCAP05165 728 aaPredicted RBP4.77□□□□□ -1.65
PTPN12-208ENST00000447995 IFIT1P09914 478 aaKnown RBP4.77□□□□□ -1.65
PTPN12-208ENST00000447995 HSP90B1P14625 803 aaKnown RBP4.77□□□□□ -1.65
PTPN12-208ENST00000447995 MCM5P33992 734 aa4.77□□□□□ -1.65
PTPN12-208ENST00000447995 KRT85P78386 507 aa4.77□□□□□ -1.65
PTPN12-208ENST00000447995 FGD1P98174 961 aa4.77□□□□□ -1.65
PTPN12-208ENST00000447995 C19orf57Q0VDD7 668 aa4.77□□□□□ -1.65
PTPN12-208ENST00000447995 ADCK5Q3MIX3 580 aa4.77□□□□□ -1.65
PTPN12-208ENST00000447995 CCDC158Q5M9N0 1113 aa4.77□□□□□ -1.65
PTPN12-208ENST00000447995 GORABQ5T7V8 394 aa4.77□□□□□ -1.65
PTPN12-208ENST00000447995 XKR5Q6UX68 686 aa4.77□□□□□ -1.65
PTPN12-208ENST00000447995 TTLL7Q6ZT98 887 aa4.77□□□□□ -1.65
PTPN12-208ENST00000447995 USP48Q86UV5 1035 aa4.77□□□□□ -1.65
PTPN12-208ENST00000447995 TMEM102Q8N9M5 508 aaPredicted RBP4.77□□□□□ -1.65
PTPN12-208ENST00000447995 EDEM1Q92611 657 aa4.77□□□□□ -1.65
PTPN12-208ENST00000447995 NEUROD6Q96NK8 337 aa4.77□□□□□ -1.65
PTPN12-208ENST00000447995 NEK1Q96PY6 1258 aa4.77□□□□□ -1.65
PTPN12-208ENST00000447995 LLPHQ9BRT6 129 aaKnown RBP4.77□□□□□ -1.65
PTPN12-208ENST00000447995 DSCC1Q9BVC3 393 aa4.77□□□□□ -1.65
PTPN12-208ENST00000447995 PLA2G12BQ9BX93 195 aa4.77□□□□□ -1.65
PTPN12-208ENST00000447995 TMPRSS13Q9BYE2 586 aa4.77□□□□□ -1.65
PTPN12-208ENST00000447995 KRTAP4-7Q9BYR0 210 aa4.77□□□□□ -1.65
PTPN12-208ENST00000447995 SCAND2PQ9GZW5 306 aaPredicted RBP4.77□□□□□ -1.65
PTPN12-208ENST00000447995 PAG1Q9NWQ8 432 aa4.77□□□□□ -1.65
PTPN12-208ENST00000447995 SEPT3Q9UH03 358 aa4.77□□□□□ -1.65
PTPN12-208ENST00000447995 CTNNA3Q9UI47 895 aa4.77□□□□□ -1.65
PTPN12-208ENST00000447995 ELP1O95163 1332 aa4.76□□□□□ -1.65
PTPN12-208ENST00000447995 MAP3K15Q6ZN16 1313 aa4.76□□□□□ -1.65
PTPN12-208ENST00000447995 ZNF335Q9H4Z2 1342 aaPredicted RBP4.76□□□□□ -1.65
PTPN12-208ENST00000447995 COL14A1Q05707 1796 aaKnown RBP4.76□□□□□ -1.65
PTPN12-208ENST00000447995 LOC100289279A0A1B0GTE1 492 aa4.76□□□□□ -1.65
PTPN12-208ENST00000447995 SYCE3A1L190 88 aa4.76□□□□□ -1.65
PTPN12-208ENST00000447995 A6NHS1 94 aa4.76□□□□□ -1.65
PTPN12-208ENST00000447995 RNF113AO15541 343 aaKnown RBP4.76□□□□□ -1.65
PTPN12-208ENST00000447995 PDGFAP04085 211 aa4.76□□□□□ -1.65
PTPN12-208ENST00000447995 CPA1P15085 419 aa4.76□□□□□ -1.65
PTPN12-208ENST00000447995 CES1P23141 567 aa4.76□□□□□ -1.65
PTPN12-208ENST00000447995 MSNP26038 577 aaKnown RBP4.76□□□□□ -1.65
PTPN12-208ENST00000447995 PIP4K2AP48426 406 aaPredicted RBP4.76□□□□□ -1.65
PTPN12-208ENST00000447995 HMGN5P82970 282 aaKnown RBP4.76□□□□□ -1.65
PTPN12-208ENST00000447995 IFIT5Q13325 482 aaKnown RBP4.76□□□□□ -1.65
PTPN12-208ENST00000447995 CPSF6Q16630 551 aaKnown RBP eCLIP4.76□□□□□ -1.65
PTPN12-208ENST00000447995 ME3Q16798 604 aa4.76□□□□□ -1.65
PTPN12-208ENST00000447995 TTC39AQ5SRH9 613 aa4.76□□□□□ -1.65
PTPN12-208ENST00000447995 LARP1BQ659C4 914 aaKnown RBP4.76□□□□□ -1.65
PTPN12-208ENST00000447995 ZSCAN25Q6NSZ9 544 aa4.76□□□□□ -1.65
PTPN12-208ENST00000447995 CBLL1Q75N03 491 aa4.76□□□□□ -1.65
PTPN12-208ENST00000447995 DDX46Q7L014 1031 aaKnown RBP4.76□□□□□ -1.65
PTPN12-208ENST00000447995 ATG9AQ7Z3C6 839 aa4.76□□□□□ -1.65
PTPN12-208ENST00000447995 VN1R5Q7Z5H4 357 aa4.76□□□□□ -1.65
PTPN12-208ENST00000447995 ZNF589Q86UQ0 364 aaPredicted RBP4.76□□□□□ -1.65
PTPN12-208ENST00000447995 VSIG10LQ86VR7 867 aa4.76□□□□□ -1.65
PTPN12-208ENST00000447995 ZSCAN30Q86W11 494 aa4.76□□□□□ -1.65
PTPN12-208ENST00000447995 SHISA5Q8N114 240 aa4.76□□□□□ -1.65
PTPN12-208ENST00000447995 ZBTB38Q8NAP3 1195 aaPredicted RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms