RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 ZNF536O15090 1300 aa28.45■■■□□ 2.14
RFFL-206ENST00000447669 LIG1P18858 919 aa28.44■■■□□ 2.14
RFFL-206ENST00000447669 PPATQ06203 517 aa28.44■■■□□ 2.14
RFFL-206ENST00000447669 TTC38Q5R3I4 469 aa28.44■■■□□ 2.14
RFFL-206ENST00000447669 P2RX7Q99572 595 aaKnown RBP28.44■■■□□ 2.14
RFFL-206ENST00000447669 GOLGA6L4A6NEF3 574 aa28.43■■■□□ 2.14
RFFL-206ENST00000447669 SPDYE5A6NIY4 337 aa28.43■■■□□ 2.14
RFFL-206ENST00000447669 MCM7P33993 719 aa28.43■■■□□ 2.14
RFFL-206ENST00000447669 CLIC6Q96NY7 704 aa28.43■■■□□ 2.14
RFFL-206ENST00000447669 RAVER2Q9HCJ3 691 aaKnown RBP28.43■■■□□ 2.14
RFFL-206ENST00000447669 GRIN1Q05586 938 aa28.43■■■□□ 2.14
RFFL-206ENST00000447669 GADL1Q6ZQY3 521 aa28.43■■■□□ 2.14
RFFL-206ENST00000447669 EIF4ENIF1Q9NRA8 985 aaKnown RBP28.43■■■□□ 2.14
RFFL-206ENST00000447669 TMEM63CQ9P1W3 806 aa28.43■■■□□ 2.14
RFFL-206ENST00000447669 NOL7Q9UMY1 257 aaKnown RBP28.43■■■□□ 2.14
RFFL-206ENST00000447669 MEIS2O14770 477 aa28.42■■■□□ 2.14
RFFL-206ENST00000447669 HOXA13P31271 388 aaPredicted RBP28.42■■■□□ 2.14
RFFL-206ENST00000447669 CLK2P49760 499 aaKnown RBP28.42■■■□□ 2.14
RFFL-206ENST00000447669 MKRN3Q13064 507 aaKnown RBP28.42■■■□□ 2.14
RFFL-206ENST00000447669 SH3D19Q5HYK7 790 aa28.42■■■□□ 2.14
RFFL-206ENST00000447669 FAM177A1Q8N128 213 aaPredicted RBP28.42■■■□□ 2.14
RFFL-206ENST00000447669 BICD2Q8TD16 824 aa28.42■■■□□ 2.14
RFFL-206ENST00000447669 COL11A1P12107 1806 aaPredicted RBP28.42■■■□□ 2.14
RFFL-206ENST00000447669 PEX10O60683 326 aa28.42■■■□□ 2.14
RFFL-206ENST00000447669 CATSPERGQ6ZRH7 1159 aa28.42■■■□□ 2.14
RFFL-206ENST00000447669 KCNG4Q8TDN1 519 aa28.42■■■□□ 2.14
RFFL-206ENST00000447669 TBCKQ8TEA7 893 aa28.42■■■□□ 2.14
RFFL-206ENST00000447669 GOLPH3LQ9H4A5 285 aa28.42■■■□□ 2.14
RFFL-206ENST00000447669 GBA2Q9HCG7 927 aaPredicted RBP28.42■■■□□ 2.14
RFFL-206ENST00000447669 ITGBL1O95965 494 aaPredicted RBP28.41■■■□□ 2.14
RFFL-206ENST00000447669 MRPL12P52815 198 aaKnown RBP28.41■■■□□ 2.14
RFFL-206ENST00000447669 CST9Q5W186 159 aa28.41■■■□□ 2.14
RFFL-206ENST00000447669 RBM46Q8TBY0 533 aaKnown RBP28.41■■■□□ 2.14
RFFL-206ENST00000447669 SLC38A10Q9HBR0 1119 aa28.41■■■□□ 2.14
RFFL-206ENST00000447669 EDIL3O43854 480 aa28.4■■■□□ 2.14
RFFL-206ENST00000447669 NONOQ15233 471 aaKnown RBP eCLIP28.4■■■□□ 2.14
RFFL-206ENST00000447669 AXDND1Q5T1B0 1012 aaPredicted RBP28.4■■■□□ 2.14
RFFL-206ENST00000447669 KRT25Q7Z3Z0 450 aa28.4■■■□□ 2.14
RFFL-206ENST00000447669 SLC10A4Q96EP9 437 aa28.4■■■□□ 2.14
RFFL-206ENST00000447669 CCPG1Q9ULG6 757 aa28.4■■■□□ 2.14
RFFL-206ENST00000447669 VWA5AO00534 786 aa28.4■■■□□ 2.14
RFFL-206ENST00000447669 MBD3O95983 291 aa28.4■■■□□ 2.14
RFFL-206ENST00000447669 SPECC1Q5M775 1068 aa28.4■■■□□ 2.14
RFFL-206ENST00000447669 HOMER2Q9NSB8 354 aa28.4■■■□□ 2.14
RFFL-206ENST00000447669 MYH7BA7E2Y1 1941 aa28.4■■■□□ 2.14
RFFL-206ENST00000447669 LETM2Q2VYF4 491 aa28.39■■■□□ 2.14
RFFL-206ENST00000447669 CCAR1Q8IX12 1150 aaKnown RBP28.39■■■□□ 2.14
RFFL-206ENST00000447669 A0A0G2JLL6 359 aaPredicted RBP28.38■■■□□ 2.13
RFFL-206ENST00000447669 ICAM1P05362 532 aa28.38■■■□□ 2.13
RFFL-206ENST00000447669 DSG3P32926 999 aa28.38■■■□□ 2.13
RFFL-206ENST00000447669 PTGDRQ13258 359 aa28.38■■■□□ 2.13
RFFL-206ENST00000447669 PRRT2Q7Z6L0 340 aaPredicted RBP28.38■■■□□ 2.13
RFFL-206ENST00000447669 CFBP00751 764 aa28.38■■■□□ 2.13
RFFL-206ENST00000447669 PPIL2Q13356 520 aa28.38■■■□□ 2.13
RFFL-206ENST00000447669 COG2Q14746 738 aa28.38■■■□□ 2.13
RFFL-206ENST00000447669 CHADLQ6NUI6 762 aa28.38■■■□□ 2.13
RFFL-206ENST00000447669 A0A1B0GVL5 298 aa28.37■■■□□ 2.13
RFFL-206ENST00000447669 NR1I2O75469 434 aa28.37■■■□□ 2.13
RFFL-206ENST00000447669 ADALQ6DHV7 355 aa28.37■■■□□ 2.13
RFFL-206ENST00000447669 POTEEQ6S8J3 1075 aa28.37■■■□□ 2.13
RFFL-206ENST00000447669 ALAS1P13196 640 aa28.36■■■□□ 2.13
RFFL-206ENST00000447669 FBXO2Q9UK22 296 aaPredicted RBP28.36■■■□□ 2.13
RFFL-206ENST00000447669 KCNH4Q9UQ05 1017 aa28.36■■■□□ 2.13
RFFL-206ENST00000447669 RIPK3Q9Y572 518 aa28.36■■■□□ 2.13
RFFL-206ENST00000447669 CCNT1O60563 726 aaKnown RBP28.36■■■□□ 2.13
RFFL-206ENST00000447669 PPP6R2O75170 966 aa28.36■■■□□ 2.13
RFFL-206ENST00000447669 TRAPPC10P48553 1259 aa28.36■■■□□ 2.13
RFFL-206ENST00000447669 MOGSQ13724 837 aa28.36■■■□□ 2.13
RFFL-206ENST00000447669 TMEM60Q9H2L4 133 aa28.36■■■□□ 2.13
RFFL-206ENST00000447669 SPDYE16A6NNV3 312 aaPredicted RBP28.35■■■□□ 2.13
RFFL-206ENST00000447669 NFIBO00712 420 aa28.35■■■□□ 2.13
RFFL-206ENST00000447669 MUM1L1Q5H9M0 696 aa28.35■■■□□ 2.13
RFFL-206ENST00000447669 NEK8Q86SG6 692 aa28.35■■■□□ 2.13
RFFL-206ENST00000447669 FCHSD1Q86WN1 690 aa28.35■■■□□ 2.13
RFFL-206ENST00000447669 C2orf69Q8N8R5 385 aa28.35■■■□□ 2.13
RFFL-206ENST00000447669 FSIP1Q8NA03 581 aa28.35■■■□□ 2.13
RFFL-206ENST00000447669 CTDP1Q9Y5B0 961 aaPredicted RBP28.35■■■□□ 2.13
RFFL-206ENST00000447669 CXCL11O14625 94 aa28.35■■■□□ 2.13
RFFL-206ENST00000447669 ZBED4O75132 1171 aa28.35■■■□□ 2.13
RFFL-206ENST00000447669 SHC4Q6S5L8 630 aa28.35■■■□□ 2.13
RFFL-206ENST00000447669 C4orf32Q8N8J7 132 aa28.35■■■□□ 2.13
RFFL-206ENST00000447669 REPS2Q8NFH8 660 aa28.35■■■□□ 2.13
RFFL-206ENST00000447669 LOC285556D6RIA3 1793 aa28.34■■■□□ 2.13
RFFL-206ENST00000447669 TMEM132BQ14DG7 1078 aa28.34■■■□□ 2.13
RFFL-206ENST00000447669 ANO3Q9BYT9 981 aa28.34■■■□□ 2.13
RFFL-206ENST00000447669 DACT1Q9NYF0 836 aa28.34■■■□□ 2.13
RFFL-206ENST00000447669 CEP131Q9UPN4 1083 aa28.34■■■□□ 2.13
RFFL-206ENST00000447669 TDP2O95551 362 aa28.33■■■□□ 2.13
RFFL-206ENST00000447669 IL17AQ16552 155 aa28.33■■■□□ 2.13
RFFL-206ENST00000447669 KRI1Q8N9T8 703 aaKnown RBP28.33■■■□□ 2.13
RFFL-206ENST00000447669 CLEC4DQ8WXI8 215 aa28.33■■■□□ 2.13
RFFL-206ENST00000447669 ADAMTS5Q9UNA0 930 aa28.33■■■□□ 2.13
RFFL-206ENST00000447669 MRPL11Q9Y3B7 192 aaKnown RBP28.33■■■□□ 2.13
RFFL-206ENST00000447669 PTPREP23469 700 aa28.33■■■□□ 2.13
RFFL-206ENST00000447669 ATP2C1P98194 919 aaPredicted RBP28.33■■■□□ 2.13
RFFL-206ENST00000447669 UIMC1Q96RL1 719 aa28.33■■■□□ 2.13
RFFL-206ENST00000447669 GPBP1L1Q9HC44 474 aaPredicted RBP28.33■■■□□ 2.13
RFFL-206ENST00000447669 NDUFA8P51970 172 aa28.32■■■□□ 2.12
RFFL-206ENST00000447669 JMYQ8N9B5 988 aa28.32■■■□□ 2.12
RFFL-206ENST00000447669 ABCB11O95342 1321 aa28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms