RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 MYO1CO00159 1063 aa21.34■■□□□ 1.01
SDCBP-204ENST00000447182 SYF2O95926 243 aaKnown RBP21.34■■□□□ 1.01
SDCBP-204ENST00000447182 TBC1D8BQ0IIM8 1120 aa21.34■■□□□ 1.01
SDCBP-204ENST00000447182 INF2Q27J81 1249 aa21.34■■□□□ 1.01
SDCBP-204ENST00000447182 COBLL1Q53SF7 1204 aa21.34■■□□□ 1.01
SDCBP-204ENST00000447182 CCDC47Q96A33 483 aaKnown RBP21.34■■□□□ 1.01
SDCBP-204ENST00000447182 LACRTQ9GZZ8 138 aa21.34■■□□□ 1.01
SDCBP-204ENST00000447182 BARHL2Q9NY43 387 aa21.34■■□□□ 1.01
SDCBP-204ENST00000447182 HPCAL4Q9UM19 191 aa21.34■■□□□ 1.01
SDCBP-204ENST00000447182 ZC3H4Q9UPT8 1303 aaKnown RBP21.33■■□□□ 1.01
SDCBP-204ENST00000447182 ROBO1Q9Y6N7 1651 aa21.33■■□□□ 1.01
SDCBP-204ENST00000447182 RCCD1A6NED2 376 aa21.33■■□□□ 1.01
SDCBP-204ENST00000447182 SRGAP2O75044 1071 aa21.33■■□□□ 1.01
SDCBP-204ENST00000447182 PRDX5P30044 214 aa21.33■■□□□ 1.01
SDCBP-204ENST00000447182 TFAP4Q01664 338 aa21.33■■□□□ 1.01
SDCBP-204ENST00000447182 COG1Q8WTW3 980 aa21.33■■□□□ 1.01
SDCBP-204ENST00000447182 CELF1Q92879 486 aaKnown RBP21.33■■□□□ 1.01
SDCBP-204ENST00000447182 FAM204AQ9H8W3 233 aa21.33■■□□□ 1.01
SDCBP-204ENST00000447182 TFR2Q9UP52 801 aa21.33■■□□□ 1.01
SDCBP-204ENST00000447182 PRPF6O94906 941 aaKnown RBP21.32■■□□□ 1
SDCBP-204ENST00000447182 KLRK1P26718 216 aa21.32■■□□□ 1
SDCBP-204ENST00000447182 HIBADHP31937 336 aaKnown RBP21.32■■□□□ 1
SDCBP-204ENST00000447182 SLC10A5Q5PT55 438 aa21.32■■□□□ 1
SDCBP-204ENST00000447182 C12orf60Q5U649 245 aa21.32■■□□□ 1
SDCBP-204ENST00000447182 CNOT6LQ96LI5 555 aaKnown RBP21.32■■□□□ 1
SDCBP-204ENST00000447182 C7orf25Q9BPX7 421 aa21.32■■□□□ 1
SDCBP-204ENST00000447182 TSGA10Q9BZW7 698 aa21.32■■□□□ 1
SDCBP-204ENST00000447182 TRIM9Q9C026 710 aa21.32■■□□□ 1
SDCBP-204ENST00000447182 MCM9Q9NXL9 1143 aa21.32■■□□□ 1
SDCBP-204ENST00000447182 STXBP3O00186 592 aa21.32■■□□□ 1
SDCBP-204ENST00000447182 RNF40O75150 1001 aa21.32■■□□□ 1
SDCBP-204ENST00000447182 SLC35G1Q2M3R5 365 aa21.32■■□□□ 1
SDCBP-204ENST00000447182 TCP11L1Q9NUJ3 509 aa21.32■■□□□ 1
SDCBP-204ENST00000447182 LCMT1Q9UIC8 334 aa21.32■■□□□ 1
SDCBP-204ENST00000447182 RRP15Q9Y3B9 282 aaKnown RBP21.32■■□□□ 1
SDCBP-204ENST00000447182 ROBO3Q96MS0 1386 aa21.31■■□□□ 1
SDCBP-204ENST00000447182 PHACTR2O75167 634 aa21.31■■□□□ 1
SDCBP-204ENST00000447182 VAV2P52735 878 aa21.31■■□□□ 1
SDCBP-204ENST00000447182 MIIPQ5JXC2 388 aa21.31■■□□□ 1
SDCBP-204ENST00000447182 ANKRD40Q6AI12 368 aa21.31■■□□□ 1
SDCBP-204ENST00000447182 IQCEQ6IPM2 695 aa21.31■■□□□ 1
SDCBP-204ENST00000447182 FNBP4Q8N3X1 1017 aaPredicted RBP21.31■■□□□ 1
SDCBP-204ENST00000447182 RASSF4Q9H2L5 321 aa21.31■■□□□ 1
SDCBP-204ENST00000447182 ZNF335Q9H4Z2 1342 aaPredicted RBP21.31■■□□□ 1
SDCBP-204ENST00000447182 NUTM2BA6NNL0 878 aaPredicted RBP21.31■■□□□ 1
SDCBP-204ENST00000447182 NUTM2EB1AL46 878 aaPredicted RBP21.31■■□□□ 1
SDCBP-204ENST00000447182 CYTH3O43739 400 aa21.31■■□□□ 1
SDCBP-204ENST00000447182 USP17L8P0C7I0 530 aa21.31■■□□□ 1
SDCBP-204ENST00000447182 PLCG1P19174 1290 aa21.31■■□□□ 1
SDCBP-204ENST00000447182 HNRNPH3P31942 346 aaKnown RBP21.31■■□□□ 1
SDCBP-204ENST00000447182 CABP7Q86V35 215 aa21.31■■□□□ 1
SDCBP-204ENST00000447182 CAPZA3Q96KX2 299 aa21.31■■□□□ 1
SDCBP-204ENST00000447182 PLIN2Q99541 437 aa21.31■■□□□ 1
SDCBP-204ENST00000447182 PDE4DQ08499 809 aa21.3■■□□□ 1
SDCBP-204ENST00000447182 KIF5AQ12840 1032 aa21.3■■□□□ 1
SDCBP-204ENST00000447182 PODXL2Q9NZ53 605 aa21.3■■□□□ 1
SDCBP-204ENST00000447182 COL5A3P25940 1745 aaPredicted RBP21.3■■□□□ 1
SDCBP-204ENST00000447182 TNNT3P45378 269 aaPredicted RBP21.29■■□□□ 1
SDCBP-204ENST00000447182 KLK7P49862 253 aa21.29■■□□□ 1
SDCBP-204ENST00000447182 ITIH3Q06033 890 aa21.29■■□□□ 1
SDCBP-204ENST00000447182 CCNI2Q6ZMN8 369 aaPredicted RBP21.29■■□□□ 1
SDCBP-204ENST00000447182 ZNF572Q7Z3I7 529 aaPredicted RBP21.29■■□□□ 1
SDCBP-204ENST00000447182 HEATR3Q7Z4Q2 680 aa21.29■■□□□ 1
SDCBP-204ENST00000447182 GOLGA6L1Q8N7Z2 621 aa21.29■■□□□ 1
SDCBP-204ENST00000447182 AFAP1L1Q8TED9 768 aa21.29■■□□□ 1
SDCBP-204ENST00000447182 RUBCNQ92622 972 aa21.29■■□□□ 1
SDCBP-204ENST00000447182 LZTS2Q9BRK4 669 aa21.29■■□□□ 1
SDCBP-204ENST00000447182 NOC4LQ9BVI4 516 aaKnown RBP21.29■■□□□ 1
SDCBP-204ENST00000447182 ANKRD2Q9GZV1 360 aa21.29■■□□□ 1
SDCBP-204ENST00000447182 RNF216Q9NWF9 866 aaPredicted RBP21.29■■□□□ 1
SDCBP-204ENST00000447182 COL16A1Q07092 1604 aaPredicted RBP21.29■■□□□ 1
SDCBP-204ENST00000447182 PALM3A6NDB9 673 aaPredicted RBP21.29■■□□□ 1
SDCBP-204ENST00000447182 PDE2AO00408 941 aaPredicted RBP21.29■■□□□ 1
SDCBP-204ENST00000447182 RGL2O15211 777 aa21.29■■□□□ 1
SDCBP-204ENST00000447182 OR52Z1P0C646 297 aa21.29■■□□□ 1
SDCBP-204ENST00000447182 IDEP14735 1019 aa21.29■■□□□ 1
SDCBP-204ENST00000447182 MTIF2P46199 727 aaKnown RBP21.29■■□□□ 1
SDCBP-204ENST00000447182 RPS8P62241 208 aaKnown RBP21.29■■□□□ 1
SDCBP-204ENST00000447182 STK4Q13043 487 aa21.29■■□□□ 1
SDCBP-204ENST00000447182 LRRC31Q6UY01 552 aa21.29■■□□□ 1
SDCBP-204ENST00000447182 TRIM58Q8NG06 486 aa21.29■■□□□ 1
SDCBP-204ENST00000447182 SECISBP2LQ93073 1101 aaKnown RBP21.29■■□□□ 1
SDCBP-204ENST00000447182 ZMYND12Q9H0C1 365 aa21.29■■□□□ 1
SDCBP-204ENST00000447182 STRCQ7RTU9 1775 aa21.29■■□□□ 1
SDCBP-204ENST00000447182 A0A0U1RQG5 324 aaPredicted RBP21.28■■□□□ 1
SDCBP-204ENST00000447182 AMPD3Q01432 767 aa21.28■■□□□ 1
SDCBP-204ENST00000447182 DDB1Q16531 1140 aa21.28■■□□□ 1
SDCBP-204ENST00000447182 TXNRD1Q16881 649 aa21.28■■□□□ 1
SDCBP-204ENST00000447182 SPTY2D1Q68D10 685 aaPredicted RBP21.28■■□□□ 1
SDCBP-204ENST00000447182 CAGE1Q8TC20 777 aa21.28■■□□□ 1
SDCBP-204ENST00000447182 BBXQ8WY36 941 aaPredicted RBP21.28■■□□□ 1
SDCBP-204ENST00000447182 ACSBG1Q96GR2 724 aa21.28■■□□□ 1
SDCBP-204ENST00000447182 PLAGL2Q9UPG8 496 aa21.28■■□□□ 1
SDCBP-204ENST00000447182 JRKLQ9Y4A0 524 aa21.28■■□□□ 1
SDCBP-204ENST00000447182 PRLRP16471 622 aa21.28■■□□□ 1
SDCBP-204ENST00000447182 SPA17Q15506 151 aa21.28■■□□□ 1
SDCBP-204ENST00000447182 FKBP15Q5T1M5 1219 aa21.28■■□□□ 1
SDCBP-204ENST00000447182 KRT25Q7Z3Z0 450 aa21.28■■□□□ 1
SDCBP-204ENST00000447182 MMGT1Q8N4V1 131 aa21.28■■□□□ 1
SDCBP-204ENST00000447182 SNX12Q9UMY4 172 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms