RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 MYO1EQ12965 1108 aa9.39□□□□□ -0.91
PTPN3-204ENST00000446349 FASTKD5Q7L8L6 764 aaKnown RBP9.39□□□□□ -0.91
PTPN3-204ENST00000446349 HDXQ7Z353 690 aa9.39□□□□□ -0.91
PTPN3-204ENST00000446349 SECISBP2LQ93073 1101 aaKnown RBP9.39□□□□□ -0.91
PTPN3-204ENST00000446349 PSAPP07602 524 aa9.39□□□□□ -0.91
PTPN3-204ENST00000446349 KYAT1Q16773 422 aa9.39□□□□□ -0.91
PTPN3-204ENST00000446349 KIAA1841Q6NSI8 718 aa9.39□□□□□ -0.91
PTPN3-204ENST00000446349 CCDC186Q7Z3E2 898 aa9.39□□□□□ -0.91
PTPN3-204ENST00000446349 TTC39CQ8N584 583 aa9.39□□□□□ -0.91
PTPN3-204ENST00000446349 TULP4Q9NRJ4 1543 aa9.39□□□□□ -0.91
PTPN3-204ENST00000446349 PFKFB2O60825 505 aa9.39□□□□□ -0.91
PTPN3-204ENST00000446349 SLFN12LQ6IEE8 588 aa9.39□□□□□ -0.91
PTPN3-204ENST00000446349 USP44Q9H0E7 712 aa9.39□□□□□ -0.91
PTPN3-204ENST00000446349 AMFRQ9UKV5 643 aa9.39□□□□□ -0.91
PTPN3-204ENST00000446349 ARHGAP6O43182 974 aa9.38□□□□□ -0.91
PTPN3-204ENST00000446349 PRDM1O75626 825 aa9.38□□□□□ -0.91
PTPN3-204ENST00000446349 CDC42EP1Q00587 391 aa9.38□□□□□ -0.91
PTPN3-204ENST00000446349 KRT222Q8N1A0 295 aa9.38□□□□□ -0.91
PTPN3-204ENST00000446349 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.38□□□□□ -0.91
PTPN3-204ENST00000446349 EIF3DO15371 548 aaKnown RBP eCLIP9.38□□□□□ -0.91
PTPN3-204ENST00000446349 GTPBP6O43824 516 aaPredicted RBP9.38□□□□□ -0.91
PTPN3-204ENST00000446349 SH2D4BQ5SQS7 431 aa9.38□□□□□ -0.91
PTPN3-204ENST00000446349 ARMCX5Q6P1M9 558 aa9.38□□□□□ -0.91
PTPN3-204ENST00000446349 FAM227BQ96M60 508 aa9.38□□□□□ -0.91
PTPN3-204ENST00000446349 RAB20Q9NX57 234 aa9.38□□□□□ -0.91
PTPN3-204ENST00000446349 AK9Q5TCS8 1911 aa9.38□□□□□ -0.91
PTPN3-204ENST00000446349 RSAD2Q8WXG1 361 aa9.38□□□□□ -0.91
PTPN3-204ENST00000446349 PPP2R3CQ969Q6 453 aa9.38□□□□□ -0.91
PTPN3-204ENST00000446349 CAMSAP1Q5T5Y3 1602 aa9.38□□□□□ -0.91
PTPN3-204ENST00000446349 CLTCQ00610 1675 aaKnown RBP9.38□□□□□ -0.91
PTPN3-204ENST00000446349 BCAMP50895 628 aa9.38□□□□□ -0.91
PTPN3-204ENST00000446349 JAK3P52333 1124 aa9.38□□□□□ -0.91
PTPN3-204ENST00000446349 ARMCX2Q7L311 632 aa9.38□□□□□ -0.91
PTPN3-204ENST00000446349 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.38□□□□□ -0.91
PTPN3-204ENST00000446349 CCDC68Q9H2F9 335 aa9.38□□□□□ -0.91
PTPN3-204ENST00000446349 STAP2Q9UGK3 403 aa9.38□□□□□ -0.91
PTPN3-204ENST00000446349 PPARGP37231 505 aaPredicted RBP9.38□□□□□ -0.91
PTPN3-204ENST00000446349 SYDE2Q5VT97 1194 aa9.38□□□□□ -0.91
PTPN3-204ENST00000446349 RCSD1Q6JBY9 416 aa9.38□□□□□ -0.91
PTPN3-204ENST00000446349 C8orf74Q6P047 294 aa9.38□□□□□ -0.91
PTPN3-204ENST00000446349 ZNF577Q9BSK1 485 aa9.38□□□□□ -0.91
PTPN3-204ENST00000446349 MTA3Q9BTC8 594 aa9.38□□□□□ -0.91
PTPN3-204ENST00000446349 SH3GLB2Q9NR46 395 aa9.38□□□□□ -0.91
PTPN3-204ENST00000446349 CRB1P82279 1406 aa9.38□□□□□ -0.91
PTPN3-204ENST00000446349 I3L4J1 428 aa9.38□□□□□ -0.91
PTPN3-204ENST00000446349 CIB2O75838 187 aa9.38□□□□□ -0.91
PTPN3-204ENST00000446349 PTK2Q05397 1052 aa9.38□□□□□ -0.91
PTPN3-204ENST00000446349 RPS6KA1Q15418 735 aa9.38□□□□□ -0.91
PTPN3-204ENST00000446349 POMGNT1Q8WZA1 660 aa9.38□□□□□ -0.91
PTPN3-204ENST00000446349 TIGD1Q96MW7 591 aa9.38□□□□□ -0.91
PTPN3-204ENST00000446349 SPATA31E1Q6ZUB1 1445 aa9.38□□□□□ -0.91
PTPN3-204ENST00000446349 CEP152O94986 1710 aa9.38□□□□□ -0.91
PTPN3-204ENST00000446349 HSPD1P10809 573 aaKnown RBP9.38□□□□□ -0.91
PTPN3-204ENST00000446349 LACTBP83111 547 aaPredicted RBP9.38□□□□□ -0.91
PTPN3-204ENST00000446349 RNASELQ05823 741 aaKnown RBP9.38□□□□□ -0.91
PTPN3-204ENST00000446349 GOLGA8FQ08AF8 430 aa9.38□□□□□ -0.91
PTPN3-204ENST00000446349 GOLGA8DPQ0D2H9 430 aa9.38□□□□□ -0.91
PTPN3-204ENST00000446349 PSMD2Q13200 908 aa9.38□□□□□ -0.91
PTPN3-204ENST00000446349 SEMA3FQ13275 785 aa9.38□□□□□ -0.91
PTPN3-204ENST00000446349 AP3B2Q13367 1082 aa9.38□□□□□ -0.91
PTPN3-204ENST00000446349 ACCSQ96QU6 501 aa9.38□□□□□ -0.91
PTPN3-204ENST00000446349 PPP1R9BQ96SB3 815 aa9.38□□□□□ -0.91
PTPN3-204ENST00000446349 PLIN2Q99541 437 aa9.38□□□□□ -0.91
PTPN3-204ENST00000446349 GREM2Q9H772 168 aa9.38□□□□□ -0.91
PTPN3-204ENST00000446349 RIC8AQ9NPQ8 531 aa9.38□□□□□ -0.91
PTPN3-204ENST00000446349 AKT3Q9Y243 479 aa9.38□□□□□ -0.91
PTPN3-204ENST00000446349 GLI2P10070 1586 aa9.37□□□□□ -0.91
PTPN3-204ENST00000446349 LDHAP00338 332 aaKnown RBP9.37□□□□□ -0.91
PTPN3-204ENST00000446349 NOLC1Q14978 699 aaKnown RBP eCLIP9.37□□□□□ -0.91
PTPN3-204ENST00000446349 PEX26Q7Z412 305 aa9.37□□□□□ -0.91
PTPN3-204ENST00000446349 LRRIQ4A6NIV6 560 aa9.37□□□□□ -0.91
PTPN3-204ENST00000446349 XPAP23025 273 aaPredicted RBP9.37□□□□□ -0.91
PTPN3-204ENST00000446349 PPP1R21Q6ZMI0 780 aa9.37□□□□□ -0.91
PTPN3-204ENST00000446349 TRIM58Q8NG06 486 aa9.37□□□□□ -0.91
PTPN3-204ENST00000446349 DDX17Q92841 729 aaKnown RBP9.37□□□□□ -0.91
PTPN3-204ENST00000446349 SNX25Q9H3E2 840 aa9.37□□□□□ -0.91
PTPN3-204ENST00000446349 VPS54Q9P1Q0 977 aa9.37□□□□□ -0.91
PTPN3-204ENST00000446349 AFF2P51816 1311 aa9.37□□□□□ -0.91
PTPN3-204ENST00000446349 PNMA6EA0A0J9YXQ4 647 aa9.37□□□□□ -0.91
PTPN3-204ENST00000446349 SCNN1DP51172 638 aa9.37□□□□□ -0.91
PTPN3-204ENST00000446349 MFAP3P55082 362 aa9.37□□□□□ -0.91
PTPN3-204ENST00000446349 TPD52P55327 224 aaPredicted RBP9.37□□□□□ -0.91
PTPN3-204ENST00000446349 C10orf76Q5T2E6 689 aa9.37□□□□□ -0.91
PTPN3-204ENST00000446349 PPP1R18Q6NYC8 613 aa9.37□□□□□ -0.91
PTPN3-204ENST00000446349 PPP4R3CPQ6ZMV5 832 aa9.37□□□□□ -0.91
PTPN3-204ENST00000446349 CCDC25Q86WR0 208 aa9.37□□□□□ -0.91
PTPN3-204ENST00000446349 FEM1BQ9UK73 627 aa9.37□□□□□ -0.91
PTPN3-204ENST00000446349 PCDHA4Q9UN74 947 aa9.37□□□□□ -0.91
PTPN3-204ENST00000446349 ADCY9O60503 1353 aa9.37□□□□□ -0.91
PTPN3-204ENST00000446349 RLBP1P12271 317 aa9.37□□□□□ -0.91
PTPN3-204ENST00000446349 ELF1P32519 619 aa9.37□□□□□ -0.91
PTPN3-204ENST00000446349 POLA2Q14181 598 aa9.37□□□□□ -0.91
PTPN3-204ENST00000446349 ZMYM1Q5SVZ6 1142 aa9.37□□□□□ -0.91
PTPN3-204ENST00000446349 CPLX4Q7Z7G2 160 aa9.37□□□□□ -0.91
PTPN3-204ENST00000446349 TRIM62Q9BVG3 475 aa9.37□□□□□ -0.91
PTPN3-204ENST00000446349 CPSF3Q9UKF6 684 aaKnown RBP9.37□□□□□ -0.91
PTPN3-204ENST00000446349 KCNH4Q9UQ05 1017 aa9.37□□□□□ -0.91
PTPN3-204ENST00000446349 RIPOR2Q9Y4F9 1068 aa9.37□□□□□ -0.91
PTPN3-204ENST00000446349 ROBO2Q9HCK4 1378 aa9.37□□□□□ -0.91
PTPN3-204ENST00000446349 CPSF1Q10570 1443 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms