RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 CCDC120Q96HB5 630 aa6.54□□□□□ -1.36
HMGB1P48-201ENST00000446155 RNPC3Q96LT9 517 aaKnown RBP6.54□□□□□ -1.36
HMGB1P48-201ENST00000446155 CCDC140Q96MF4 163 aa6.54□□□□□ -1.36
HMGB1P48-201ENST00000446155 PTCHD1Q96NR3 888 aa6.54□□□□□ -1.36
HMGB1P48-201ENST00000446155 CDADC1Q9BWV3 514 aa6.54□□□□□ -1.36
HMGB1P48-201ENST00000446155 KANSL2Q9H9L4 492 aa6.54□□□□□ -1.36
HMGB1P48-201ENST00000446155 TBX22Q9Y458 520 aa6.54□□□□□ -1.36
HMGB1P48-201ENST00000446155 TRAV20A0A0B4J274 112 aa6.53□□□□□ -1.36
HMGB1P48-201ENST00000446155 ARNTLO00327 626 aa6.53□□□□□ -1.36
HMGB1P48-201ENST00000446155 DLX3O60479 287 aa6.53□□□□□ -1.36
HMGB1P48-201ENST00000446155 EFEMP2O95967 443 aa6.53□□□□□ -1.36
HMGB1P48-201ENST00000446155 HPXP02790 462 aa6.53□□□□□ -1.36
HMGB1P48-201ENST00000446155 THBDP07204 575 aa6.53□□□□□ -1.36
HMGB1P48-201ENST00000446155 KIR2DL1P43626 348 aaPredicted RBP6.53□□□□□ -1.36
HMGB1P48-201ENST00000446155 KIR2DL2P43627 348 aaPredicted RBP6.53□□□□□ -1.36
HMGB1P48-201ENST00000446155 MAP4K2Q12851 820 aa6.53□□□□□ -1.36
HMGB1P48-201ENST00000446155 DUSP4Q13115 394 aa6.53□□□□□ -1.36
HMGB1P48-201ENST00000446155 SQSTM1Q13501 440 aa6.53□□□□□ -1.36
HMGB1P48-201ENST00000446155 NR0B2Q15466 257 aa6.53□□□□□ -1.36
HMGB1P48-201ENST00000446155 SLCO6A1Q86UG4 719 aa6.53□□□□□ -1.36
HMGB1P48-201ENST00000446155 TMEM145Q8NBT3 493 aa6.53□□□□□ -1.36
HMGB1P48-201ENST00000446155 PDZD8Q8NEN9 1154 aa6.53□□□□□ -1.36
HMGB1P48-201ENST00000446155 FRS2Q8WU20 508 aa6.53□□□□□ -1.36
HMGB1P48-201ENST00000446155 EXOC2Q96KP1 924 aa6.53□□□□□ -1.36
HMGB1P48-201ENST00000446155 RC3H2Q9HBD1 1191 aaKnown RBP6.53□□□□□ -1.36
HMGB1P48-201ENST00000446155 TNFRSF10DQ9UBN6 386 aa6.53□□□□□ -1.36
HMGB1P48-201ENST00000446155 CPP00450 1065 aa6.52□□□□□ -1.37
HMGB1P48-201ENST00000446155 PABPC1P11940 636 aaKnown RBP6.52□□□□□ -1.37
HMGB1P48-201ENST00000446155 GIMAP6Q6P9H5 292 aa6.52□□□□□ -1.37
HMGB1P48-201ENST00000446155 CYP2R1Q6VVX0 501 aa6.52□□□□□ -1.37
HMGB1P48-201ENST00000446155 ANKS4BQ8N8V4 417 aa6.52□□□□□ -1.37
HMGB1P48-201ENST00000446155 KISS1RQ969F8 398 aaPredicted RBP6.52□□□□□ -1.37
HMGB1P48-201ENST00000446155 IER2Q9BTL4 223 aa6.52□□□□□ -1.37
HMGB1P48-201ENST00000446155 PPM1GO15355 546 aaPredicted RBP6.51□□□□□ -1.37
HMGB1P48-201ENST00000446155 SNRPB2P08579 225 aaKnown RBP6.51□□□□□ -1.37
HMGB1P48-201ENST00000446155 SEPHS1P49903 392 aa6.51□□□□□ -1.37
HMGB1P48-201ENST00000446155 HK2P52789 917 aa6.51□□□□□ -1.37
HMGB1P48-201ENST00000446155 ERVFC1P60507 584 aa6.51□□□□□ -1.37
HMGB1P48-201ENST00000446155 CHRNEQ04844 493 aa6.51□□□□□ -1.37
HMGB1P48-201ENST00000446155 PRSS53Q2L4Q9 553 aa6.51□□□□□ -1.37
HMGB1P48-201ENST00000446155 ZC3H12BQ5HYM0 836 aaKnown RBP6.51□□□□□ -1.37
HMGB1P48-201ENST00000446155 ACBD5Q5T8D3 534 aaPredicted RBP6.51□□□□□ -1.37
HMGB1P48-201ENST00000446155 SH3TC2Q8TF17 1288 aa6.51□□□□□ -1.37
HMGB1P48-201ENST00000446155 MMP19Q99542 508 aa6.51□□□□□ -1.37
HMGB1P48-201ENST00000446155 PTCH2Q9Y6C5 1203 aa6.51□□□□□ -1.37
HMGB1P48-201ENST00000446155 CADPSQ9ULU8 1353 aa6.5□□□□□ -1.37
HMGB1P48-201ENST00000446155 PRODHO43272 600 aa6.5□□□□□ -1.37
HMGB1P48-201ENST00000446155 USP2O75604 605 aaPredicted RBP6.5□□□□□ -1.37
HMGB1P48-201ENST00000446155 PLS3P13797 630 aa6.5□□□□□ -1.37
HMGB1P48-201ENST00000446155 NTRK3Q16288 839 aa6.5□□□□□ -1.37
HMGB1P48-201ENST00000446155 TIGD5Q53EQ6 642 aa6.5□□□□□ -1.37
HMGB1P48-201ENST00000446155 TMEM67Q5HYA8 995 aa6.5□□□□□ -1.37
HMGB1P48-201ENST00000446155 FAM209AQ5JX71 171 aa6.5□□□□□ -1.37
HMGB1P48-201ENST00000446155 E4F1Q66K89 784 aaPredicted RBP6.5□□□□□ -1.37
HMGB1P48-201ENST00000446155 MBLAC2Q68D91 279 aa6.5□□□□□ -1.37
HMGB1P48-201ENST00000446155 NSMFQ6X4W1 530 aa6.5□□□□□ -1.37
HMGB1P48-201ENST00000446155 KSR1Q8IVT5 923 aa6.5□□□□□ -1.37
HMGB1P48-201ENST00000446155 CCDC103Q8IW40 242 aa6.5□□□□□ -1.37
HMGB1P48-201ENST00000446155 SCUBE1Q8IWY4 988 aa6.5□□□□□ -1.37
HMGB1P48-201ENST00000446155 NLGN1Q8N2Q7 840 aa6.5□□□□□ -1.37
HMGB1P48-201ENST00000446155 ZSWIM2Q8NEG5 633 aa6.5□□□□□ -1.37
HMGB1P48-201ENST00000446155 KCTD13Q8WZ19 329 aa6.5□□□□□ -1.37
HMGB1P48-201ENST00000446155 SLC26A8Q96RN1 970 aa6.5□□□□□ -1.37
HMGB1P48-201ENST00000446155 JMJD8Q96S16 334 aa6.5□□□□□ -1.37
HMGB1P48-201ENST00000446155 GPRC5CQ9NQ84 441 aa6.5□□□□□ -1.37
HMGB1P48-201ENST00000446155 TMEM260Q9NX78 707 aa6.5□□□□□ -1.37
HMGB1P48-201ENST00000446155 CLEC1BQ9P126 229 aa6.5□□□□□ -1.37
HMGB1P48-201ENST00000446155 TMEFF2Q9UIK5 374 aaPredicted RBP6.5□□□□□ -1.37
HMGB1P48-201ENST00000446155 NPFFR2Q9Y5X5 522 aa6.5□□□□□ -1.37
HMGB1P48-201ENST00000446155 A0A1W2PQ45 241 aaPredicted RBP6.49□□□□□ -1.37
HMGB1P48-201ENST00000446155 A0A1W2PQY0 241 aa6.49□□□□□ -1.37
HMGB1P48-201ENST00000446155 FITM1A5D6W6 292 aa6.49□□□□□ -1.37
HMGB1P48-201ENST00000446155 NRDCO43847 1150 aa6.49□□□□□ -1.37
HMGB1P48-201ENST00000446155 C6orf222P0C671 652 aaPredicted RBP6.49□□□□□ -1.37
HMGB1P48-201ENST00000446155 ITGB5P18084 799 aa6.49□□□□□ -1.37
HMGB1P48-201ENST00000446155 ECI1P42126 302 aa6.49□□□□□ -1.37
HMGB1P48-201ENST00000446155 HLA-DQA1Q5Y7H0 255 aa6.49□□□□□ -1.37
HMGB1P48-201ENST00000446155 ATG4DQ86TL0 474 aaPredicted RBP6.49□□□□□ -1.37
HMGB1P48-201ENST00000446155 SHISA4Q96DD7 197 aa6.49□□□□□ -1.37
HMGB1P48-201ENST00000446155 MRPL42Q9Y6G3 142 aaKnown RBP6.49□□□□□ -1.37
HMGB1P48-201ENST00000446155 TRBV23OR9-2A0A075B6M9 112 aa6.48□□□□□ -1.37
HMGB1P48-201ENST00000446155 TRBV23-1A0A0A0MS06 115 aa6.48□□□□□ -1.37
HMGB1P48-201ENST00000446155 PAMP19021 973 aa6.48□□□□□ -1.37
HMGB1P48-201ENST00000446155 HSF5Q4G112 596 aaPredicted RBP6.48□□□□□ -1.37
HMGB1P48-201ENST00000446155 NBPF11Q86T75 865 aa6.48□□□□□ -1.37
HMGB1P48-201ENST00000446155 NLRX1Q86UT6 975 aa6.48□□□□□ -1.37
HMGB1P48-201ENST00000446155 SPPL2CQ8IUH8 684 aa6.48□□□□□ -1.37
HMGB1P48-201ENST00000446155 LILRA2Q8N149 483 aa6.48□□□□□ -1.37
HMGB1P48-201ENST00000446155 OXR1Q8N573 874 aa6.48□□□□□ -1.37
HMGB1P48-201ENST00000446155 NAT16Q8N8M0 369 aa6.48□□□□□ -1.37
HMGB1P48-201ENST00000446155 SYTL4Q96C24 671 aaPredicted RBP6.48□□□□□ -1.37
HMGB1P48-201ENST00000446155 PLCD4Q9BRC7 762 aa6.48□□□□□ -1.37
HMGB1P48-201ENST00000446155 DHRS4Q9BTZ2 278 aa6.48□□□□□ -1.37
HMGB1P48-201ENST00000446155 MRPS23Q9Y3D9 190 aaKnown RBP6.48□□□□□ -1.37
HMGB1P48-201ENST00000446155 NPHP3-ACAD11A0A0J9YXS1 232 aa6.47□□□□□ -1.37
HMGB1P48-201ENST00000446155 TLDC2A0PJX2 215 aa6.47□□□□□ -1.37
HMGB1P48-201ENST00000446155 PAPLNO95428 1278 aa6.47□□□□□ -1.37
HMGB1P48-201ENST00000446155 TBC1D8O95759 1140 aa6.47□□□□□ -1.37
HMGB1P48-201ENST00000446155 NCLP19338 710 aaKnown RBP6.47□□□□□ -1.37
HMGB1P48-201ENST00000446155 L1CAMP32004 1257 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms