RNA–Protein interactions for RNA: ENST00000446046.5

FN1-212, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-212ENST00000446046 AMFRQ9UKV5 643 aa12.86□□□□□ -0.35
FN1-212ENST00000446046 FRMPD2Q68DX3 1309 aaPredicted RBP12.86□□□□□ -0.35
FN1-212ENST00000446046 MED7O43513 233 aa12.86□□□□□ -0.35
FN1-212ENST00000446046 SCG2P13521 617 aa12.86□□□□□ -0.35
FN1-212ENST00000446046 NLRP12P59046 1061 aa12.86□□□□□ -0.35
FN1-212ENST00000446046 GOLGA8FQ08AF8 430 aa12.86□□□□□ -0.35
FN1-212ENST00000446046 GOLGA8DPQ0D2H9 430 aa12.86□□□□□ -0.35
FN1-212ENST00000446046 DENND2CQ68D51 928 aa12.86□□□□□ -0.35
FN1-212ENST00000446046 ELMOD1Q8N336 334 aa12.86□□□□□ -0.35
FN1-212ENST00000446046 PPFIBP2Q8ND30 876 aa12.86□□□□□ -0.35
FN1-212ENST00000446046 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.86□□□□□ -0.35
FN1-212ENST00000446046 SUGCTQ9HAC7 445 aa12.86□□□□□ -0.35
FN1-212ENST00000446046 A6NJR5 290 aa12.86□□□□□ -0.35
FN1-212ENST00000446046 LONP1P36776 959 aaKnown RBP12.86□□□□□ -0.35
FN1-212ENST00000446046 RC3H1Q5TC82 1133 aaKnown RBP12.86□□□□□ -0.35
FN1-212ENST00000446046 SNX25Q9H3E2 840 aa12.86□□□□□ -0.35
FN1-212ENST00000446046 VPS54Q9P1Q0 977 aa12.86□□□□□ -0.35
FN1-212ENST00000446046 LMNB2Q03252 620 aa12.86□□□□□ -0.35
FN1-212ENST00000446046 PPP2R3AQ06190 1150 aa12.86□□□□□ -0.35
FN1-212ENST00000446046 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.86□□□□□ -0.35
FN1-212ENST00000446046 ARMCX3Q9UH62 379 aaPredicted RBP12.86□□□□□ -0.35
FN1-212ENST00000446046 PDE6AP16499 860 aa12.85□□□□□ -0.35
FN1-212ENST00000446046 RBSNQ9H1K0 784 aa12.85□□□□□ -0.35
FN1-212ENST00000446046 LMCD1Q9NZU5 365 aa12.85□□□□□ -0.35
FN1-212ENST00000446046 PRDM1O75626 825 aa12.85□□□□□ -0.35
FN1-212ENST00000446046 CIAPIN1Q6FI81 312 aa12.85□□□□□ -0.35
FN1-212ENST00000446046 CCDC51Q96ER9 411 aa12.85□□□□□ -0.35
FN1-212ENST00000446046 RPGRIP1Q96KN7 1286 aa12.85□□□□□ -0.35
FN1-212ENST00000446046 COA1Q9GZY4 146 aa12.85□□□□□ -0.35
FN1-212ENST00000446046 RPAP1Q9BWH6 1393 aaPredicted RBP12.85□□□□□ -0.35
FN1-212ENST00000446046 EBAG9O00559 213 aa12.85□□□□□ -0.35
FN1-212ENST00000446046 ELF1P32519 619 aa12.85□□□□□ -0.35
FN1-212ENST00000446046 TRAPPC10P48553 1259 aa12.85□□□□□ -0.35
FN1-212ENST00000446046 ALCAMQ13740 583 aa12.85□□□□□ -0.35
FN1-212ENST00000446046 POLA2Q14181 598 aa12.85□□□□□ -0.35
FN1-212ENST00000446046 GPR108Q9NPR9 543 aa12.85□□□□□ -0.35
FN1-212ENST00000446046 IQCA1LA6NCM1 817 aa12.85□□□□□ -0.35
FN1-212ENST00000446046 CCDC186Q7Z3E2 898 aa12.85□□□□□ -0.35
FN1-212ENST00000446046 LRRC47Q8N1G4 583 aaKnown RBP12.85□□□□□ -0.35
FN1-212ENST00000446046 FAM76AQ8TAV0 307 aa12.85□□□□□ -0.35
FN1-212ENST00000446046 RIC8AQ9NPQ8 531 aa12.85□□□□□ -0.35
FN1-212ENST00000446046 PPFIA1Q13136 1202 aa12.84□□□□□ -0.35
FN1-212ENST00000446046 ZNF577Q9BSK1 485 aa12.84□□□□□ -0.35
FN1-212ENST00000446046 RAB20Q9NX57 234 aa12.84□□□□□ -0.35
FN1-212ENST00000446046 USTQ9Y2C2 406 aa12.84□□□□□ -0.35
FN1-212ENST00000446046 GYG1P46976 350 aa12.84□□□□□ -0.35
FN1-212ENST00000446046 RPS6KA1Q15418 735 aa12.84□□□□□ -0.35
FN1-212ENST00000446046 ARMCX5Q6P1M9 558 aa12.84□□□□□ -0.35
FN1-212ENST00000446046 MAP7D3Q8IWC1 876 aa12.84□□□□□ -0.35
FN1-212ENST00000446046 SECISBP2LQ93073 1101 aaKnown RBP12.84□□□□□ -0.35
FN1-212ENST00000446046 FAM227BQ96M60 508 aa12.84□□□□□ -0.35
FN1-212ENST00000446046 PTCH1Q13635 1447 aa12.84□□□□□ -0.35
FN1-212ENST00000446046 ATP11AP98196 1134 aa12.84□□□□□ -0.35
FN1-212ENST00000446046 KRT24Q2M2I5 525 aa12.84□□□□□ -0.35
FN1-212ENST00000446046 G2E3Q7L622 706 aa12.84□□□□□ -0.35
FN1-212ENST00000446046 FNBP4Q8N3X1 1017 aaPredicted RBP12.84□□□□□ -0.35
FN1-212ENST00000446046 TBC1D7Q9P0N9 293 aa12.84□□□□□ -0.35
FN1-212ENST00000446046 RSRC2Q7L4I2 434 aaKnown RBP12.84□□□□□ -0.35
FN1-212ENST00000446046 NDUFAF2Q8N183 169 aa12.84□□□□□ -0.35
FN1-212ENST00000446046 ANXA13P27216 316 aa12.84□□□□□ -0.35
FN1-212ENST00000446046 MAN1A1P33908 653 aa12.84□□□□□ -0.35
FN1-212ENST00000446046 NOLC1Q14978 699 aaKnown RBP eCLIP12.84□□□□□ -0.356e-51■□□□□ 11.3
FN1-212ENST00000446046 USPL1Q5W0Q7 1092 aa12.84□□□□□ -0.35
FN1-212ENST00000446046 PPARGP37231 505 aaPredicted RBP12.84□□□□□ -0.35
FN1-212ENST00000446046 RASSF2P50749 326 aa12.84□□□□□ -0.35
FN1-212ENST00000446046 KRT12Q99456 494 aa12.84□□□□□ -0.35
FN1-212ENST00000446046 NUF2Q9BZD4 464 aa12.84□□□□□ -0.35
FN1-212ENST00000446046 ANKFY1Q9P2R3 1169 aa12.84□□□□□ -0.35
FN1-212ENST00000446046 ABCC3O15438 1527 aa12.83□□□□□ -0.36
FN1-212ENST00000446046 TMEM232C9JQI7 657 aa12.83□□□□□ -0.36
FN1-212ENST00000446046 MYL1P05976 194 aa12.83□□□□□ -0.36
FN1-212ENST00000446046 CYP2J2P51589 502 aa12.83□□□□□ -0.36
FN1-212ENST00000446046 FAM47AQ5JRC9 791 aa12.83□□□□□ -0.36
FN1-212ENST00000446046 CARMIL3Q8ND23 1372 aa12.83□□□□□ -0.36
FN1-212ENST00000446046 LTKP29376 864 aa12.83□□□□□ -0.36
FN1-212ENST00000446046 BCAMP50895 628 aa12.83□□□□□ -0.36
FN1-212ENST00000446046 IRX4P78413 519 aa12.83□□□□□ -0.36
FN1-212ENST00000446046 SEPT2Q15019 361 aa12.83□□□□□ -0.36
FN1-212ENST00000446046 NOSTRINQ8IVI9 506 aa12.83□□□□□ -0.36
FN1-212ENST00000446046 CCDC105Q8IYK2 499 aa12.83□□□□□ -0.36
FN1-212ENST00000446046 TRIM56Q9BRZ2 755 aaKnown RBP12.83□□□□□ -0.36
FN1-212ENST00000446046 TBC1D8O95759 1140 aa12.83□□□□□ -0.36
FN1-212ENST00000446046 BMP3P12645 472 aa12.83□□□□□ -0.36
FN1-212ENST00000446046 TERF1P54274 439 aa12.83□□□□□ -0.36
FN1-212ENST00000446046 PPP2R5DQ14738 602 aa12.83□□□□□ -0.36
FN1-212ENST00000446046 ADGRB3O60242 1522 aa12.83□□□□□ -0.36
FN1-212ENST00000446046 TLDC2A0PJX2 215 aa12.83□□□□□ -0.36
FN1-212ENST00000446046 PTK2Q05397 1052 aa12.83□□□□□ -0.36
FN1-212ENST00000446046 CCDC24Q8N4L8 307 aa12.83□□□□□ -0.36
FN1-212ENST00000446046 VCX3BQ9H321 246 aa12.83□□□□□ -0.36
FN1-212ENST00000446046 TMEM206Q9H813 350 aa12.83□□□□□ -0.36
FN1-212ENST00000446046 DYMQ7RTS9 669 aa12.83□□□□□ -0.36
FN1-212ENST00000446046 DISC1Q9NRI5 854 aa12.83□□□□□ -0.36
FN1-212ENST00000446046 MAP3K7O43318 606 aa12.83□□□□□ -0.36
FN1-212ENST00000446046 FANCBQ8NB91 859 aa12.83□□□□□ -0.36
FN1-212ENST00000446046 SMIM23A6NLE4 172 aa12.82□□□□□ -0.36
FN1-212ENST00000446046 S100BP04271 92 aaPredicted RBP12.82□□□□□ -0.36
FN1-212ENST00000446046 TECP42680 631 aa12.82□□□□□ -0.36
FN1-212ENST00000446046 RBM6P78332 1123 aaKnown RBP12.82□□□□□ -0.36
FN1-212ENST00000446046 ARHGAP4P98171 946 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms