RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 CCDC112Q8NEF3 446 aa18.96■□□□□ 0.63
LAPTM4B-201ENST00000445593 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.96■□□□□ 0.63
LAPTM4B-201ENST00000445593 PRCPP42785 496 aa18.95■□□□□ 0.62
LAPTM4B-201ENST00000445593 SLC1A4P43007 532 aa18.95■□□□□ 0.62
LAPTM4B-201ENST00000445593 USH1GQ495M9 461 aa18.95■□□□□ 0.62
LAPTM4B-201ENST00000445593 SPATA1Q5VX52 437 aa18.95■□□□□ 0.62
LAPTM4B-201ENST00000445593 COL11A2P13942 1736 aaPredicted RBP18.95■□□□□ 0.62
LAPTM4B-201ENST00000445593 SLC15A2Q16348 729 aa18.95■□□□□ 0.62
LAPTM4B-201ENST00000445593 PRMT6Q96LA8 375 aaPredicted RBP18.95■□□□□ 0.62
LAPTM4B-201ENST00000445593 RIOX1Q9H6W3 641 aa18.95■□□□□ 0.62
LAPTM4B-201ENST00000445593 ERCC5P28715 1186 aaPredicted RBP18.95■□□□□ 0.62
LAPTM4B-201ENST00000445593 ASPRV1Q53RT3 343 aa18.95■□□□□ 0.62
LAPTM4B-201ENST00000445593 SPECC1LQ69YQ0 1117 aa18.95■□□□□ 0.62
LAPTM4B-201ENST00000445593 ELOA2Q8IYF1 753 aaPredicted RBP18.95■□□□□ 0.62
LAPTM4B-201ENST00000445593 DAGLBQ8NCG7 672 aa18.95■□□□□ 0.62
LAPTM4B-201ENST00000445593 PPP1R1BQ9UD71 204 aaPredicted RBP18.95■□□□□ 0.62
LAPTM4B-201ENST00000445593 PPP4R3BQ5MIZ7 849 aa18.94■□□□□ 0.62
LAPTM4B-201ENST00000445593 SUGT1Q9Y2Z0 365 aa18.94■□□□□ 0.62
LAPTM4B-201ENST00000445593 SLX4Q8IY92 1834 aa18.94■□□□□ 0.62
LAPTM4B-201ENST00000445593 PMS1P54277 932 aaKnown RBP18.94■□□□□ 0.62
LAPTM4B-201ENST00000445593 PAK1Q13153 545 aa18.94■□□□□ 0.62
LAPTM4B-201ENST00000445593 MTF1Q14872 753 aa18.94■□□□□ 0.62
LAPTM4B-201ENST00000445593 KMT5BQ4FZB7 885 aa18.94■□□□□ 0.62
LAPTM4B-201ENST00000445593 STRIP1Q5VSL9 837 aa18.94■□□□□ 0.62
LAPTM4B-201ENST00000445593 ZDHHC15Q96MV8 337 aa18.94■□□□□ 0.62
LAPTM4B-201ENST00000445593 ZNF277Q9NRM2 450 aaPredicted RBP18.94■□□□□ 0.62
LAPTM4B-201ENST00000445593 ASIC1P78348 528 aa18.93■□□□□ 0.62
LAPTM4B-201ENST00000445593 CALCRLQ16602 461 aa18.93■□□□□ 0.62
LAPTM4B-201ENST00000445593 DYMQ7RTS9 669 aa18.93■□□□□ 0.62
LAPTM4B-201ENST00000445593 STK32BQ9NY57 414 aa18.93■□□□□ 0.62
LAPTM4B-201ENST00000445593 SWAP70Q9UH65 585 aa18.93■□□□□ 0.62
LAPTM4B-201ENST00000445593 YDJCA8MPS7 323 aa18.93■□□□□ 0.62
LAPTM4B-201ENST00000445593 ICA1Q05084 483 aa18.93■□□□□ 0.62
LAPTM4B-201ENST00000445593 ZYXQ15942 572 aaKnown RBP18.93■□□□□ 0.62
LAPTM4B-201ENST00000445593 GALNT17Q6IS24 598 aa18.93■□□□□ 0.62
LAPTM4B-201ENST00000445593 SCN9AQ15858 1988 aa18.93■□□□□ 0.62
LAPTM4B-201ENST00000445593 N4BP3O15049 544 aa18.93■□□□□ 0.62
LAPTM4B-201ENST00000445593 JAG1P78504 1218 aa18.93■□□□□ 0.62
LAPTM4B-201ENST00000445593 POTEAQ6S8J7 498 aa18.93■□□□□ 0.62
LAPTM4B-201ENST00000445593 IGSF22Q8N9C0 903 aa18.93■□□□□ 0.62
LAPTM4B-201ENST00000445593 IGKV6D-41A0A0C4DH26 115 aa18.92■□□□□ 0.62
LAPTM4B-201ENST00000445593 SSBP05455 408 aaKnown RBP eCLIP18.92■□□□□ 0.62
LAPTM4B-201ENST00000445593 SLFN13Q68D06 897 aa18.92■□□□□ 0.62
LAPTM4B-201ENST00000445593 BAG1Q99933 345 aaPredicted RBP18.92■□□□□ 0.62
LAPTM4B-201ENST00000445593 VEZTQ9HBM0 779 aa18.92■□□□□ 0.62
LAPTM4B-201ENST00000445593 GH2P01242 217 aa18.92■□□□□ 0.62
LAPTM4B-201ENST00000445593 FCER1AP12319 257 aa18.92■□□□□ 0.62
LAPTM4B-201ENST00000445593 GPIHBP1Q8IV16 184 aa18.92■□□□□ 0.62
LAPTM4B-201ENST00000445593 ZNF710Q8N1W2 664 aa18.92■□□□□ 0.62
LAPTM4B-201ENST00000445593 CSRNP1Q96S65 589 aa18.92■□□□□ 0.62
LAPTM4B-201ENST00000445593 NUDT12Q9BQG2 462 aa18.92■□□□□ 0.62
LAPTM4B-201ENST00000445593 LTBP1Q14766 1721 aa18.92■□□□□ 0.62
LAPTM4B-201ENST00000445593 TOGARAM2Q6ZUX3 1019 aa18.91■□□□□ 0.62
LAPTM4B-201ENST00000445593 CDAN1Q8IWY9 1227 aa18.91■□□□□ 0.62
LAPTM4B-201ENST00000445593 CNKSR1Q969H4 720 aa18.91■□□□□ 0.62
LAPTM4B-201ENST00000445593 PI4KBQ9UBF8 816 aa18.91■□□□□ 0.62
LAPTM4B-201ENST00000445593 RBL2Q08999 1139 aa18.91■□□□□ 0.62
LAPTM4B-201ENST00000445593 KRT31Q15323 416 aa18.91■□□□□ 0.62
LAPTM4B-201ENST00000445593 QRICH1Q2TAL8 776 aa18.91■□□□□ 0.62
LAPTM4B-201ENST00000445593 NYAP1Q6ZVC0 841 aa18.91■□□□□ 0.62
LAPTM4B-201ENST00000445593 TC2NQ8N9U0 490 aa18.91■□□□□ 0.62
LAPTM4B-201ENST00000445593 LRWD1Q9UFC0 647 aa18.91■□□□□ 0.62
LAPTM4B-201ENST00000445593 DNAI1Q9UI46 699 aa18.91■□□□□ 0.62
LAPTM4B-201ENST00000445593 PNMA6FA0A0J9YX94 578 aa18.91■□□□□ 0.62
LAPTM4B-201ENST00000445593 IDEP14735 1019 aa18.91■□□□□ 0.62
LAPTM4B-201ENST00000445593 PDE4DQ08499 809 aa18.91■□□□□ 0.62
LAPTM4B-201ENST00000445593 NR1I3Q14994 352 aa18.91■□□□□ 0.62
LAPTM4B-201ENST00000445593 ZNF658Q5TYW1 1059 aaPredicted RBP18.91■□□□□ 0.62
LAPTM4B-201ENST00000445593 CCDC84Q86UT8 332 aaPredicted RBP18.91■□□□□ 0.62
LAPTM4B-201ENST00000445593 ZBTB9Q96C00 473 aa18.91■□□□□ 0.62
LAPTM4B-201ENST00000445593 CDK5RAP3Q96JB5 506 aa18.91■□□□□ 0.62
LAPTM4B-201ENST00000445593 TRIM47Q96LD4 638 aa18.91■□□□□ 0.62
LAPTM4B-201ENST00000445593 PSTPIP2Q9H939 334 aa18.91■□□□□ 0.62
LAPTM4B-201ENST00000445593 PCDHA1Q9Y5I3 950 aa18.91■□□□□ 0.62
LAPTM4B-201ENST00000445593 RAD51AP2Q09MP3 1159 aa18.9■□□□□ 0.62
LAPTM4B-201ENST00000445593 TMEM51Q9NW97 253 aa18.9■□□□□ 0.62
LAPTM4B-201ENST00000445593 LRRC37AA6NMS7 1700 aa18.9■□□□□ 0.62
LAPTM4B-201ENST00000445593 SOWAHDA6NJG2 315 aa18.9■□□□□ 0.62
LAPTM4B-201ENST00000445593 CBX1P83916 185 aa18.9■□□□□ 0.62
LAPTM4B-201ENST00000445593 MCM6Q14566 821 aa18.9■□□□□ 0.62
LAPTM4B-201ENST00000445593 PPFIBP1Q86W92 1011 aa18.9■□□□□ 0.62
LAPTM4B-201ENST00000445593 LARGE2Q8N3Y3 721 aa18.9■□□□□ 0.62
LAPTM4B-201ENST00000445593 RRP1BQ14684 758 aaKnown RBP18.89■□□□□ 0.62
LAPTM4B-201ENST00000445593 ABCB5Q2M3G0 1257 aa18.89■□□□□ 0.62
LAPTM4B-201ENST00000445593 MIGA2Q7L4E1 593 aa18.89■□□□□ 0.62
LAPTM4B-201ENST00000445593 SLC39A2Q9NP94 309 aa18.89■□□□□ 0.62
LAPTM4B-201ENST00000445593 A0A1B0GTH6 734 aa18.89■□□□□ 0.61
LAPTM4B-201ENST00000445593 ZBTB5O15062 677 aa18.89■□□□□ 0.61
LAPTM4B-201ENST00000445593 SNHG28P0DPA3 235 aa18.89■□□□□ 0.61
LAPTM4B-201ENST00000445593 CASP14P31944 242 aa18.89■□□□□ 0.61
LAPTM4B-201ENST00000445593 FILIP1LQ4L180 1135 aa18.89■□□□□ 0.61
LAPTM4B-201ENST00000445593 STYK1Q6J9G0 422 aa18.89■□□□□ 0.61
LAPTM4B-201ENST00000445593 APTXQ7Z2E3 356 aaKnown RBP18.89■□□□□ 0.61
LAPTM4B-201ENST00000445593 MMTAG2Q9BU76 263 aaKnown RBP18.89■□□□□ 0.61
LAPTM4B-201ENST00000445593 A0A0U1RQJ8 604 aa18.89■□□□□ 0.61
LAPTM4B-201ENST00000445593 KCNJ18B7U540 433 aa18.89■□□□□ 0.61
LAPTM4B-201ENST00000445593 KCNJ12Q14500 433 aa18.89■□□□□ 0.61
LAPTM4B-201ENST00000445593 CDC37Q16543 378 aaPredicted RBP18.89■□□□□ 0.61
LAPTM4B-201ENST00000445593 KIF18AQ8NI77 898 aa18.89■□□□□ 0.61
LAPTM4B-201ENST00000445593 SNX29Q8TEQ0 813 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms