RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 MNX1P50219 401 aaPredicted RBP19.95■□□□□ 0.78
LIME1-202ENST00000444951 HOMER1Q86YM7 354 aa19.95■□□□□ 0.78
LIME1-202ENST00000444951 ADGRF4Q8IZF3 695 aa19.95■□□□□ 0.78
LIME1-202ENST00000444951 PRPF38AQ8NAV1 312 aaKnown RBP19.95■□□□□ 0.78
LIME1-202ENST00000444951 PHKBQ93100 1093 aa19.95■□□□□ 0.78
LIME1-202ENST00000444951 LZTS2Q9BRK4 669 aa19.95■□□□□ 0.78
LIME1-202ENST00000444951 PPP1R9AQ9ULJ8 1098 aa19.95■□□□□ 0.78
LIME1-202ENST00000444951 NID2Q14112 1375 aa19.95■□□□□ 0.78
LIME1-202ENST00000444951 DSG3P32926 999 aa19.94■□□□□ 0.78
LIME1-202ENST00000444951 SLC4A3P48751 1232 aa19.94■□□□□ 0.78
LIME1-202ENST00000444951 ST3GAL1Q11201 340 aa19.94■□□□□ 0.78
LIME1-202ENST00000444951 PPP2R5BQ15173 497 aa19.94■□□□□ 0.78
LIME1-202ENST00000444951 SLC35G1Q2M3R5 365 aa19.94■□□□□ 0.78
LIME1-202ENST00000444951 CCDC174Q6PII3 467 aa19.94■□□□□ 0.78
LIME1-202ENST00000444951 CPLX2Q6PUV4 134 aaKnown RBP19.94■□□□□ 0.78
LIME1-202ENST00000444951 BTNL9Q6UXG8 535 aa19.94■□□□□ 0.78
LIME1-202ENST00000444951 USP6NLQ92738 828 aa19.94■□□□□ 0.78
LIME1-202ENST00000444951 FOXD4L1Q9NU39 408 aa19.94■□□□□ 0.78
LIME1-202ENST00000444951 HOXC10Q9NYD6 342 aa19.94■□□□□ 0.78
LIME1-202ENST00000444951 SPDYE16A6NNV3 312 aaPredicted RBP19.93■□□□□ 0.78
LIME1-202ENST00000444951 CYTH3O43739 400 aa19.93■□□□□ 0.78
LIME1-202ENST00000444951 ANP32AP39687 249 aaKnown RBP19.93■□□□□ 0.78
LIME1-202ENST00000444951 CCL14Q16627 93 aa19.93■□□□□ 0.78
LIME1-202ENST00000444951 MAP3K21Q5TCX8 1036 aa19.93■□□□□ 0.78
LIME1-202ENST00000444951 GPR142Q7Z601 462 aa19.93■□□□□ 0.78
LIME1-202ENST00000444951 PIGSQ96S52 555 aa19.93■□□□□ 0.78
LIME1-202ENST00000444951 NUDT12Q9BQG2 462 aa19.93■□□□□ 0.78
LIME1-202ENST00000444951 SLC26A6Q9BXS9 759 aa19.93■□□□□ 0.78
LIME1-202ENST00000444951 JMJD4Q9H9V9 463 aa19.93■□□□□ 0.78
LIME1-202ENST00000444951 RBM19Q9Y4C8 960 aaKnown RBP19.93■□□□□ 0.78
LIME1-202ENST00000444951 RPTORQ8N122 1335 aa19.93■□□□□ 0.78
LIME1-202ENST00000444951 PLA2G6O60733 806 aa19.92■□□□□ 0.78
LIME1-202ENST00000444951 ZBED4O75132 1171 aa19.92■□□□□ 0.78
LIME1-202ENST00000444951 PRKAR2AP13861 404 aaKnown RBP19.92■□□□□ 0.78
LIME1-202ENST00000444951 PLS1Q14651 629 aa19.92■□□□□ 0.78
LIME1-202ENST00000444951 MORN1Q5T089 497 aa19.92■□□□□ 0.78
LIME1-202ENST00000444951 CPXCR1Q8N123 301 aa19.92■□□□□ 0.78
LIME1-202ENST00000444951 RRP36Q96EU6 259 aaKnown RBP19.92■□□□□ 0.78
LIME1-202ENST00000444951 DDX11Q96FC9 970 aa19.92■□□□□ 0.78
LIME1-202ENST00000444951 SPZ1Q9BXG8 430 aa19.92■□□□□ 0.78
LIME1-202ENST00000444951 HMX1Q9NP08 348 aaPredicted RBP19.92■□□□□ 0.78
LIME1-202ENST00000444951 V9GY48 417 aaPredicted RBP19.92■□□□□ 0.78
LIME1-202ENST00000444951 CNTNAP5Q8WYK1 1306 aa19.92■□□□□ 0.78
LIME1-202ENST00000444951 VWA5AO00534 786 aa19.91■□□□□ 0.78
LIME1-202ENST00000444951 EVI5O60447 810 aa19.91■□□□□ 0.78
LIME1-202ENST00000444951 JAK2O60674 1132 aa19.91■□□□□ 0.78
LIME1-202ENST00000444951 CDKL5O76039 1030 aa19.91■□□□□ 0.78
LIME1-202ENST00000444951 CTDNEP1O95476 244 aa19.91■□□□□ 0.78
LIME1-202ENST00000444951 MAPK4P31152 587 aa19.91■□□□□ 0.78
LIME1-202ENST00000444951 AKAP17AQ02040 695 aaKnown RBP19.91■□□□□ 0.78
LIME1-202ENST00000444951 SSRP1Q08945 709 aaKnown RBP19.91■□□□□ 0.78
LIME1-202ENST00000444951 FUT2Q10981 343 aa19.91■□□□□ 0.78
LIME1-202ENST00000444951 BECN1Q14457 450 aa19.91■□□□□ 0.78
LIME1-202ENST00000444951 NTRK3Q16288 839 aa19.91■□□□□ 0.78
LIME1-202ENST00000444951 CDC37Q16543 378 aaPredicted RBP19.91■□□□□ 0.78
LIME1-202ENST00000444951 SPRYD3Q8NCJ5 442 aa19.91■□□□□ 0.78
LIME1-202ENST00000444951 SOCS4Q8WXH5 440 aa19.91■□□□□ 0.78
LIME1-202ENST00000444951 RIOX1Q9H6W3 641 aa19.91■□□□□ 0.78
LIME1-202ENST00000444951 RAVER2Q9HCJ3 691 aaKnown RBP19.91■□□□□ 0.78
LIME1-202ENST00000444951 BTBD7Q9P203 1132 aa19.91■□□□□ 0.78
LIME1-202ENST00000444951 SEC63Q9UGP8 760 aaKnown RBP19.91■□□□□ 0.78
LIME1-202ENST00000444951 NR2E3Q9Y5X4 410 aa19.91■□□□□ 0.78
LIME1-202ENST00000444951 PARP14Q460N5 1801 aa19.9■□□□□ 0.78
LIME1-202ENST00000444951 PTPDC1A2A3K4 754 aa19.9■□□□□ 0.78
LIME1-202ENST00000444951 XRCC5P13010 732 aaKnown RBP19.9■□□□□ 0.78
LIME1-202ENST00000444951 IFNAR1P17181 557 aa19.9■□□□□ 0.78
LIME1-202ENST00000444951 TAL1P17542 331 aaPredicted RBP19.9■□□□□ 0.78
LIME1-202ENST00000444951 QRICH1Q2TAL8 776 aa19.9■□□□□ 0.78
LIME1-202ENST00000444951 NECAB2Q7Z6G3 386 aa19.9■□□□□ 0.78
LIME1-202ENST00000444951 PLEKHH3Q7Z736 793 aa19.9■□□□□ 0.78
LIME1-202ENST00000444951 TRIM22Q8IYM9 498 aa19.9■□□□□ 0.78
LIME1-202ENST00000444951 NSUN7Q8NE18 718 aaKnown RBP19.9■□□□□ 0.78
LIME1-202ENST00000444951 RLFQ13129 1914 aa19.9■□□□□ 0.78
LIME1-202ENST00000444951 HSP90AA1P07900 732 aaKnown RBP19.89■□□□□ 0.77
LIME1-202ENST00000444951 CCND3P30281 292 aaPredicted RBP19.89■□□□□ 0.77
LIME1-202ENST00000444951 CACNB2Q08289 660 aaPredicted RBP19.89■□□□□ 0.77
LIME1-202ENST00000444951 GTF3C2Q8WUA4 911 aaPredicted RBP19.89■□□□□ 0.77
LIME1-202ENST00000444951 RANBP17Q9H2T7 1088 aaKnown RBP19.89■□□□□ 0.77
LIME1-202ENST00000444951 SLC38A10Q9HBR0 1119 aa19.89■□□□□ 0.77
LIME1-202ENST00000444951 OGDHLQ9ULD0 1010 aa19.89■□□□□ 0.77
LIME1-202ENST00000444951 RABGAP1Q9Y3P9 1069 aa19.89■□□□□ 0.77
LIME1-202ENST00000444951 ZBTB5O15062 677 aa19.88■□□□□ 0.77
LIME1-202ENST00000444951 CAPN2P17655 700 aa19.88■□□□□ 0.77
LIME1-202ENST00000444951 SMARCA1P28370 1054 aa19.88■□□□□ 0.77
LIME1-202ENST00000444951 FOSBP53539 338 aa19.88■□□□□ 0.77
LIME1-202ENST00000444951 TMEM132BQ14DG7 1078 aa19.88■□□□□ 0.77
LIME1-202ENST00000444951 USH1GQ495M9 461 aa19.88■□□□□ 0.77
LIME1-202ENST00000444951 ANKLE1Q8NAG6 615 aa19.88■□□□□ 0.77
LIME1-202ENST00000444951 AGBL1Q96MI9 1066 aa19.88■□□□□ 0.77
LIME1-202ENST00000444951 FLRT1Q9NZU1 646 aa19.88■□□□□ 0.77
LIME1-202ENST00000444951 ORC3Q9UBD5 711 aaPredicted RBP19.88■□□□□ 0.77
LIME1-202ENST00000444951 BAZ2BQ9UIF8 2168 aaKnown RBP19.88■□□□□ 0.77
LIME1-202ENST00000444951 FRMPD3Q5JV73 1810 aa19.88■□□□□ 0.77
LIME1-202ENST00000444951 PFASO15067 1338 aa19.87■□□□□ 0.77
LIME1-202ENST00000444951 PNMA6FA0A0J9YX94 578 aa19.87■□□□□ 0.77
LIME1-202ENST00000444951 PRPF3O43395 683 aaKnown RBP19.87■□□□□ 0.77
LIME1-202ENST00000444951 RGS2P41220 211 aa19.87■□□□□ 0.77
LIME1-202ENST00000444951 CUL4AQ13619 759 aa19.87■□□□□ 0.77
LIME1-202ENST00000444951 LBX2Q6XYB7 198 aa19.87■□□□□ 0.77
LIME1-202ENST00000444951 HEATR3Q7Z4Q2 680 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms