RNA–Protein interactions for RNA: ENST00000444739.6

CASP4-203, Transcript of caspase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP4, Length 2,158 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-203ENST00000444739 CCDC43Q96MW1 224 aaKnown RBP11.17□□□□□ -0.62
CASP4-203ENST00000444739 SLC40A1Q9NP59 571 aa11.17□□□□□ -0.62
CASP4-203ENST00000444739 NLRP2Q9NX02 1062 aa11.17□□□□□ -0.62
CASP4-203ENST00000444739 COL22A1Q8NFW1 1626 aaPredicted RBP11.16□□□□□ -0.62
CASP4-203ENST00000444739 CCDC189A1A4V9 331 aa11.16□□□□□ -0.62
CASP4-203ENST00000444739 MOCS3O95396 460 aa11.16□□□□□ -0.62
CASP4-203ENST00000444739 FAM107AO95990 144 aa11.16□□□□□ -0.62
CASP4-203ENST00000444739 PLEKP08567 350 aaPredicted RBP11.16□□□□□ -0.62
CASP4-203ENST00000444739 FAM153BP0C7A2 387 aa11.16□□□□□ -0.62
CASP4-203ENST00000444739 SCP2P22307 547 aa11.16□□□□□ -0.62
CASP4-203ENST00000444739 ARID4AP29374 1257 aaPredicted RBP11.16□□□□□ -0.62
CASP4-203ENST00000444739 MDH1P40925 334 aaKnown RBP11.16□□□□□ -0.62
CASP4-203ENST00000444739 TDO2P48775 406 aa11.16□□□□□ -0.62
CASP4-203ENST00000444739 SEC24CP53992 1094 aa11.16□□□□□ -0.62
CASP4-203ENST00000444739 FAM153CQ494X1 144 aa11.16□□□□□ -0.62
CASP4-203ENST00000444739 GLE1Q53GS7 698 aaKnown RBP11.16□□□□□ -0.62
CASP4-203ENST00000444739 CFAP58Q5T655 872 aa11.16□□□□□ -0.62
CASP4-203ENST00000444739 TTI2Q6NXR4 508 aa11.16□□□□□ -0.62
CASP4-203ENST00000444739 VGLL2Q8N8G2 317 aa11.16□□□□□ -0.62
CASP4-203ENST00000444739 C1orf131Q8NDD1 294 aaKnown RBP11.16□□□□□ -0.62
CASP4-203ENST00000444739 MIEF2Q96C03 454 aa11.16□□□□□ -0.62
CASP4-203ENST00000444739 RBM33Q96EV2 1170 aaKnown RBP11.16□□□□□ -0.62
CASP4-203ENST00000444739 TUBGCP2Q9BSJ2 902 aa11.16□□□□□ -0.62
CASP4-203ENST00000444739 PLA2G12BQ9BX93 195 aa11.16□□□□□ -0.62
CASP4-203ENST00000444739 ARMT1Q9H993 441 aa11.16□□□□□ -0.62
CASP4-203ENST00000444739 GDF3Q9NR23 364 aa11.16□□□□□ -0.62
CASP4-203ENST00000444739 RBM12Q9NTZ6 932 aaKnown RBP11.16□□□□□ -0.62
CASP4-203ENST00000444739 FAM153AQ9UHL3 310 aa11.16□□□□□ -0.62
CASP4-203ENST00000444739 A0A1W2PQJ5 194 aa11.16□□□□□ -0.62
CASP4-203ENST00000444739 hCG_1642624A0A1W2PR95 340 aa11.16□□□□□ -0.62
CASP4-203ENST00000444739 PRPF3O43395 683 aaKnown RBP11.16□□□□□ -0.62
CASP4-203ENST00000444739 USO1O60763 962 aaKnown RBP11.16□□□□□ -0.62
CASP4-203ENST00000444739 CXCR5P32302 372 aa11.16□□□□□ -0.62
CASP4-203ENST00000444739 PHKA1P46020 1223 aa11.16□□□□□ -0.62
CASP4-203ENST00000444739 CARSP49589 748 aaKnown RBP11.16□□□□□ -0.62
CASP4-203ENST00000444739 IFT88Q13099 833 aa11.16□□□□□ -0.62
CASP4-203ENST00000444739 SEC23AQ15436 765 aa11.16□□□□□ -0.62
CASP4-203ENST00000444739 SPA17Q15506 151 aa11.16□□□□□ -0.62
CASP4-203ENST00000444739 FKBP15Q5T1M5 1219 aa11.16□□□□□ -0.62
CASP4-203ENST00000444739 CYB5RLQ6IPT4 315 aa11.16□□□□□ -0.62
CASP4-203ENST00000444739 LMOD2Q6P5Q4 547 aa11.16□□□□□ -0.62
CASP4-203ENST00000444739 TTLL11Q8NHH1 800 aa11.16□□□□□ -0.62
CASP4-203ENST00000444739 N4BP2L2Q92802 583 aaPredicted RBP11.16□□□□□ -0.62
CASP4-203ENST00000444739 TRIM47Q96LD4 638 aa11.16□□□□□ -0.62
CASP4-203ENST00000444739 CCDC42Q96M95 316 aa11.16□□□□□ -0.62
CASP4-203ENST00000444739 PSMB7Q99436 277 aa11.16□□□□□ -0.62
CASP4-203ENST00000444739 IFIH1Q9BYX4 1025 aaKnown RBP11.16□□□□□ -0.62
CASP4-203ENST00000444739 MAGEC2Q9UBF1 373 aaPredicted RBP11.16□□□□□ -0.62
CASP4-203ENST00000444739 PCDHA13Q9Y5I0 950 aa11.16□□□□□ -0.62
CASP4-203ENST00000444739 TMCO5BA8MYB1 307 aa11.15□□□□□ -0.62
CASP4-203ENST00000444739 PRKAB2O43741 272 aa11.15□□□□□ -0.62
CASP4-203ENST00000444739 GLI1P08151 1106 aa11.15□□□□□ -0.62
CASP4-203ENST00000444739 HNRNPH3P31942 346 aaKnown RBP11.15□□□□□ -0.62
CASP4-203ENST00000444739 TBC1D8BQ0IIM8 1120 aa11.15□□□□□ -0.62
CASP4-203ENST00000444739 PPP2R5BQ15173 497 aa11.15□□□□□ -0.62
CASP4-203ENST00000444739 FIGNQ5HY92 759 aa11.15□□□□□ -0.62
CASP4-203ENST00000444739 CEP85LQ5SZL2 805 aa11.15□□□□□ -0.62
CASP4-203ENST00000444739 CCDC181Q5TID7 509 aa11.15□□□□□ -0.62
CASP4-203ENST00000444739 IFT20Q8IY31 132 aa11.15□□□□□ -0.62
CASP4-203ENST00000444739 NOC3LQ8WTT2 800 aaKnown RBP11.15□□□□□ -0.62
CASP4-203ENST00000444739 ATP6V1G3Q96LB4 118 aa11.15□□□□□ -0.62
CASP4-203ENST00000444739 DUSP9Q99956 384 aaKnown RBP11.15□□□□□ -0.62
CASP4-203ENST00000444739 VEZTQ9HBM0 779 aa11.15□□□□□ -0.62
CASP4-203ENST00000444739 ODF2LQ9ULJ1 636 aa11.15□□□□□ -0.62
CASP4-203ENST00000444739 NFU1Q9UMS0 254 aa11.15□□□□□ -0.62
CASP4-203ENST00000444739 ARAP2Q8WZ64 1704 aa11.15□□□□□ -0.62
CASP4-203ENST00000444739 NCK2O43639 380 aa11.14□□□□□ -0.63
CASP4-203ENST00000444739 KLRC4O43908 158 aa11.14□□□□□ -0.63
CASP4-203ENST00000444739 LCA5LO95447 670 aa11.14□□□□□ -0.63
CASP4-203ENST00000444739 NF2P35240 595 aa11.14□□□□□ -0.63
CASP4-203ENST00000444739 PAFAH1B1P43034 410 aa11.14□□□□□ -0.63
CASP4-203ENST00000444739 ITGB3BPQ13352 177 aaPredicted RBP11.14□□□□□ -0.63
CASP4-203ENST00000444739 KCNB1Q14721 858 aa11.14□□□□□ -0.63
CASP4-203ENST00000444739 IQCA1Q86XH1 822 aa11.14□□□□□ -0.63
CASP4-203ENST00000444739 MAGEB6Q8N7X4 407 aa11.14□□□□□ -0.63
CASP4-203ENST00000444739 FAM212AQ96EL1 285 aa11.14□□□□□ -0.63
CASP4-203ENST00000444739 FAM89AQ96GI7 184 aa11.14□□□□□ -0.63
CASP4-203ENST00000444739 TLR10Q9BXR5 811 aa11.14□□□□□ -0.63
CASP4-203ENST00000444739 ARHGAP20Q9P2F6 1191 aa11.14□□□□□ -0.63
CASP4-203ENST00000444739 RTL9Q8NET4 1388 aa11.14□□□□□ -0.63
CASP4-203ENST00000444739 HMGB1P1B2RPK0 211 aaPredicted RBP11.14□□□□□ -0.63
CASP4-203ENST00000444739 PLEKHA8P1O95397 391 aa11.14□□□□□ -0.63
CASP4-203ENST00000444739 PCCAP05165 728 aaPredicted RBP11.14□□□□□ -0.63
CASP4-203ENST00000444739 MRPL12P52815 198 aaKnown RBP11.14□□□□□ -0.63
CASP4-203ENST00000444739 PAK2Q13177 524 aa11.14□□□□□ -0.63
CASP4-203ENST00000444739 MIIPQ5JXC2 388 aa11.14□□□□□ -0.63
CASP4-203ENST00000444739 PPP4R3AQ6IN85 833 aa11.14□□□□□ -0.63
CASP4-203ENST00000444739 LDHAL6AQ6ZMR3 332 aa11.14□□□□□ -0.63
CASP4-203ENST00000444739 FAM228AQ86W67 206 aa11.14□□□□□ -0.63
CASP4-203ENST00000444739 GIMAP8Q8ND71 665 aaPredicted RBP11.14□□□□□ -0.63
CASP4-203ENST00000444739 CYFIP2Q96F07 1278 aa11.14□□□□□ -0.63
CASP4-203ENST00000444739 ALS2CR12Q96Q35 445 aa11.14□□□□□ -0.63
CASP4-203ENST00000444739 ERGIC2Q96RQ1 377 aa11.14□□□□□ -0.63
CASP4-203ENST00000444739 UBAC1Q9BSL1 405 aa11.14□□□□□ -0.63
CASP4-203ENST00000444739 ACTR5Q9H9F9 607 aaPredicted RBP11.14□□□□□ -0.63
CASP4-203ENST00000444739 DDX20Q9UHI6 824 aaKnown RBP11.14□□□□□ -0.63
CASP4-203ENST00000444739 PLAGL2Q9UPG8 496 aa11.14□□□□□ -0.63
CASP4-203ENST00000444739 V9GY48 417 aaPredicted RBP11.14□□□□□ -0.63
CASP4-203ENST00000444739 KCPQ6ZWJ8 1503 aa11.14□□□□□ -0.63
CASP4-203ENST00000444739 TNKSO95271 1327 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms