RNA–Protein interactions for RNA: ENST00000443891.5

CTDSP1-204, Transcript of CTD small phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDSP1, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-204ENST00000443891 MFSD6Q6ZSS7 791 aa19.23■□□□□ 0.67
CTDSP1-204ENST00000443891 CHD1LQ86WJ1 897 aa19.23■□□□□ 0.67
CTDSP1-204ENST00000443891 MORC4Q8TE76 937 aa19.23■□□□□ 0.67
CTDSP1-204ENST00000443891 TMEM47Q9BQJ4 181 aa19.23■□□□□ 0.67
CTDSP1-204ENST00000443891 MAF1Q9H063 256 aa19.23■□□□□ 0.67
CTDSP1-204ENST00000443891 CYP39A1Q9NYL5 469 aa19.23■□□□□ 0.67
CTDSP1-204ENST00000443891 ADD3Q9UEY8 706 aaKnown RBP19.23■□□□□ 0.67
CTDSP1-204ENST00000443891 CCPG1Q9ULG6 757 aa19.23■□□□□ 0.67
CTDSP1-204ENST00000443891 SOWAHBA6NEL2 793 aa19.22■□□□□ 0.67
CTDSP1-204ENST00000443891 ZEB2O60315 1214 aa19.22■□□□□ 0.67
CTDSP1-204ENST00000443891 NUCB1Q02818 461 aa19.22■□□□□ 0.67
CTDSP1-204ENST00000443891 TNFAIP2Q03169 654 aa19.22■□□□□ 0.67
CTDSP1-204ENST00000443891 SYDE2Q5VT97 1194 aa19.22■□□□□ 0.67
CTDSP1-204ENST00000443891 CCDC174Q6PII3 467 aa19.22■□□□□ 0.67
CTDSP1-204ENST00000443891 RILPL2Q969X0 211 aa19.22■□□□□ 0.67
CTDSP1-204ENST00000443891 TMEM265A0A087WTH1 108 aa19.21■□□□□ 0.67
CTDSP1-204ENST00000443891 ARVCFO00192 962 aa19.21■□□□□ 0.67
CTDSP1-204ENST00000443891 TLR3O15455 904 aaKnown RBP19.21■□□□□ 0.67
CTDSP1-204ENST00000443891 TIMP1P01033 207 aa19.21■□□□□ 0.67
CTDSP1-204ENST00000443891 SDSP20132 328 aa19.21■□□□□ 0.67
CTDSP1-204ENST00000443891 FPGSQ05932 587 aa19.21■□□□□ 0.67
CTDSP1-204ENST00000443891 RRP12Q5JTH9 1297 aaKnown RBP19.21■□□□□ 0.67
CTDSP1-204ENST00000443891 C9orf50Q5SZB4 431 aa19.21■□□□□ 0.67
CTDSP1-204ENST00000443891 ZNF589Q86UQ0 364 aaPredicted RBP19.21■□□□□ 0.67
CTDSP1-204ENST00000443891 ESR2Q92731 530 aa19.21■□□□□ 0.67
CTDSP1-204ENST00000443891 VTA1Q9NP79 307 aa19.21■□□□□ 0.67
CTDSP1-204ENST00000443891 GNEQ9Y223 722 aaKnown RBP19.21■□□□□ 0.67
CTDSP1-204ENST00000443891 MYADML2A6NDP7 307 aa19.2■□□□□ 0.66
CTDSP1-204ENST00000443891 ADCY6O43306 1168 aa19.2■□□□□ 0.66
CTDSP1-204ENST00000443891 GPATCH4Q5T3I0 446 aaKnown RBP19.2■□□□□ 0.66
CTDSP1-204ENST00000443891 DGKHQ86XP1 1220 aa19.2■□□□□ 0.66
CTDSP1-204ENST00000443891 PLEKHM2Q8IWE5 1019 aa19.2■□□□□ 0.66
CTDSP1-204ENST00000443891 VTI1AQ96AJ9 217 aa19.2■□□□□ 0.66
CTDSP1-204ENST00000443891 MPHOSPH6Q99547 160 aaKnown RBP19.2■□□□□ 0.66
CTDSP1-204ENST00000443891 AP5M1Q9H0R1 490 aa19.2■□□□□ 0.66
CTDSP1-204ENST00000443891 TBX21Q9UL17 535 aa19.2■□□□□ 0.66
CTDSP1-204ENST00000443891 WDR19Q8NEZ3 1342 aa19.2■□□□□ 0.66
CTDSP1-204ENST00000443891 ZNF213O14771 459 aa19.19■□□□□ 0.66
CTDSP1-204ENST00000443891 CTAGE5O15320 804 aa19.19■□□□□ 0.66
CTDSP1-204ENST00000443891 SNHG28P0DPA3 235 aa19.19■□□□□ 0.66
CTDSP1-204ENST00000443891 PDHBP11177 359 aa19.19■□□□□ 0.66
CTDSP1-204ENST00000443891 ITGB8P26012 769 aa19.19■□□□□ 0.66
CTDSP1-204ENST00000443891 MUM1L1Q5H9M0 696 aa19.19■□□□□ 0.66
CTDSP1-204ENST00000443891 MFSD5Q6N075 450 aa19.19■□□□□ 0.66
CTDSP1-204ENST00000443891 NSMFQ6X4W1 530 aa19.19■□□□□ 0.66
CTDSP1-204ENST00000443891 ZNF543Q08ER8 600 aa19.18■□□□□ 0.66
CTDSP1-204ENST00000443891 PPIGQ13427 754 aaKnown RBP eCLIP19.18■□□□□ 0.665e-8■■■□□ 15.9
CTDSP1-204ENST00000443891 TTBK2Q6IQ55 1244 aa19.18■□□□□ 0.66
CTDSP1-204ENST00000443891 NOL8Q76FK4 1167 aaKnown RBP19.18■□□□□ 0.66
CTDSP1-204ENST00000443891 TLK2Q86UE8 772 aa19.18■□□□□ 0.66
CTDSP1-204ENST00000443891 IQCA1Q86XH1 822 aa19.18■□□□□ 0.66
CTDSP1-204ENST00000443891 SLC43A3Q8NBI5 491 aa19.18■□□□□ 0.66
CTDSP1-204ENST00000443891 RNPC3Q96LT9 517 aaKnown RBP19.18■□□□□ 0.66
CTDSP1-204ENST00000443891 B4DLN1 442 aa19.17■□□□□ 0.66
CTDSP1-204ENST00000443891 MRPL12P52815 198 aaKnown RBP19.17■□□□□ 0.66
CTDSP1-204ENST00000443891 HAND2P61296 217 aa19.17■□□□□ 0.66
CTDSP1-204ENST00000443891 FSCN1Q16658 493 aaKnown RBP19.17■□□□□ 0.66
CTDSP1-204ENST00000443891 B4GALNT3Q6L9W6 998 aa19.17■□□□□ 0.66
CTDSP1-204ENST00000443891 TAPT1Q6NXT6 567 aa19.17■□□□□ 0.66
CTDSP1-204ENST00000443891 FAM126BQ8IXS8 530 aa19.17■□□□□ 0.66
CTDSP1-204ENST00000443891 TMEM199Q8N511 208 aa19.17■□□□□ 0.66
CTDSP1-204ENST00000443891 RGS22Q8NE09 1264 aa19.17■□□□□ 0.66
CTDSP1-204ENST00000443891 GUCD1Q96NT3 240 aa19.17■□□□□ 0.66
CTDSP1-204ENST00000443891 DSCC1Q9BVC3 393 aa19.17■□□□□ 0.66
CTDSP1-204ENST00000443891 DIAPH3Q9NSV4 1193 aa19.17■□□□□ 0.66
CTDSP1-204ENST00000443891 MTMR7Q9Y216 660 aa19.17■□□□□ 0.66
CTDSP1-204ENST00000443891 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.16■□□□□ 0.66
CTDSP1-204ENST00000443891 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.16■□□□□ 0.66
CTDSP1-204ENST00000443891 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.16■□□□□ 0.66
CTDSP1-204ENST00000443891 SMPD1P17405 629 aa19.16■□□□□ 0.66
CTDSP1-204ENST00000443891 SLC16A2P36021 539 aa19.16■□□□□ 0.66
CTDSP1-204ENST00000443891 SNAP25P60880 206 aa19.16■□□□□ 0.66
CTDSP1-204ENST00000443891 BAATQ14032 418 aaPredicted RBP19.16■□□□□ 0.66
CTDSP1-204ENST00000443891 DNERQ8NFT8 737 aa19.16■□□□□ 0.66
CTDSP1-204ENST00000443891 ANKS1AQ92625 1134 aa19.16■□□□□ 0.66
CTDSP1-204ENST00000443891 CHMP4CQ96CF2 233 aa19.16■□□□□ 0.66
CTDSP1-204ENST00000443891 SEMA6BQ9H3T3 888 aa19.16■□□□□ 0.66
CTDSP1-204ENST00000443891 CTNNA3Q9UI47 895 aa19.16■□□□□ 0.66
CTDSP1-204ENST00000443891 ASTN1O14525 1302 aa19.16■□□□□ 0.66
CTDSP1-204ENST00000443891 RBM47A0AV96 593 aaKnown RBP19.15■□□□□ 0.66
CTDSP1-204ENST00000443891 NKRFO15226 690 aaKnown RBP eCLIP19.15■□□□□ 0.661e-7■□□□□ 11.3
CTDSP1-204ENST00000443891 DYNC1LI2O43237 492 aaPredicted RBP19.15■□□□□ 0.66
CTDSP1-204ENST00000443891 CD4P01730 458 aa19.15■□□□□ 0.66
CTDSP1-204ENST00000443891 IGHDP01880 384 aa19.15■□□□□ 0.66
CTDSP1-204ENST00000443891 ALDH5A1P51649 535 aaPredicted RBP19.15■□□□□ 0.66
CTDSP1-204ENST00000443891 DUSP28Q4G0W2 176 aa19.15■□□□□ 0.66
CTDSP1-204ENST00000443891 RASGRP2Q7LDG7 609 aa19.15■□□□□ 0.66
CTDSP1-204ENST00000443891 TBC1D10CQ8IV04 446 aa19.15■□□□□ 0.66
CTDSP1-204ENST00000443891 GPCPD1Q9NPB8 672 aa19.15■□□□□ 0.66
CTDSP1-204ENST00000443891 FRMPD2Q68DX3 1309 aaPredicted RBP19.15■□□□□ 0.66
CTDSP1-204ENST00000443891 PTPDC1A2A3K4 754 aa19.14■□□□□ 0.65
CTDSP1-204ENST00000443891 EPHB4P54760 987 aa19.14■□□□□ 0.65
CTDSP1-204ENST00000443891 IMMTQ16891 758 aaKnown RBP19.14■□□□□ 0.65
CTDSP1-204ENST00000443891 CWC27Q6UX04 472 aaKnown RBP19.14■□□□□ 0.65
CTDSP1-204ENST00000443891 RNF207Q6ZRF8 634 aa19.14■□□□□ 0.65
CTDSP1-204ENST00000443891 KIAA1211Q6ZU35 1233 aa19.14■□□□□ 0.65
CTDSP1-204ENST00000443891 CLEC4DQ8WXI8 215 aa19.14■□□□□ 0.65
CTDSP1-204ENST00000443891 POLR3EQ9NVU0 708 aa19.14■□□□□ 0.65
CTDSP1-204ENST00000443891 DLL1O00548 723 aa19.13■□□□□ 0.65
CTDSP1-204ENST00000443891 NFIBO00712 420 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms