RNA–Protein interactions for RNA: ENST00000443790.1

EDEM1-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 2

Gene EDEM1, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-203ENST00000443790 A0A0D9SFI3 127 aa23.47■■□□□ 1.35
EDEM1-203ENST00000443790 ARVCFO00192 962 aa23.47■■□□□ 1.35
EDEM1-203ENST00000443790 TNFAIP2Q03169 654 aa23.47■■□□□ 1.35
EDEM1-203ENST00000443790 CCDC96Q2M329 555 aa23.47■■□□□ 1.35
EDEM1-203ENST00000443790 MUM1L1Q5H9M0 696 aa23.47■■□□□ 1.35
EDEM1-203ENST00000443790 DCAF4Q8WV16 495 aa23.47■■□□□ 1.35
EDEM1-203ENST00000443790 VTI1AQ96AJ9 217 aa23.47■■□□□ 1.35
EDEM1-203ENST00000443790 FAM227BQ96M60 508 aa23.47■■□□□ 1.35
EDEM1-203ENST00000443790 CYP39A1Q9NYL5 469 aa23.47■■□□□ 1.35
EDEM1-203ENST00000443790 CCPG1Q9ULG6 757 aa23.47■■□□□ 1.35
EDEM1-203ENST00000443790 MCMDC2Q4G0Z9 681 aa23.46■■□□□ 1.35
EDEM1-203ENST00000443790 MFSD5Q6N075 450 aa23.46■■□□□ 1.35
EDEM1-203ENST00000443790 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.46■■□□□ 1.35
EDEM1-203ENST00000443790 TOMM22Q9NS69 142 aa23.46■■□□□ 1.35
EDEM1-203ENST00000443790 GNEQ9Y223 722 aaKnown RBP23.46■■□□□ 1.35
EDEM1-203ENST00000443790 LCTP09848 1927 aa23.45■■□□□ 1.35
EDEM1-203ENST00000443790 ZMYM6O95789 1325 aa23.45■■□□□ 1.34
EDEM1-203ENST00000443790 TMEM265A0A087WTH1 108 aa23.45■■□□□ 1.34
EDEM1-203ENST00000443790 FGAP02671 866 aa23.45■■□□□ 1.34
EDEM1-203ENST00000443790 ICAM1P05362 532 aa23.45■■□□□ 1.34
EDEM1-203ENST00000443790 BEX3Q00994 111 aa23.45■■□□□ 1.34
EDEM1-203ENST00000443790 NOL8Q76FK4 1167 aaKnown RBP23.45■■□□□ 1.34
EDEM1-203ENST00000443790 TLK2Q86UE8 772 aa23.45■■□□□ 1.34
EDEM1-203ENST00000443790 TICAM2Q86XR7 235 aa23.45■■□□□ 1.34
EDEM1-203ENST00000443790 FAM126BQ8IXS8 530 aa23.45■■□□□ 1.34
EDEM1-203ENST00000443790 RANBP17Q9H2T7 1088 aaKnown RBP23.45■■□□□ 1.34
EDEM1-203ENST00000443790 DDX49Q9Y6V7 483 aaKnown RBP23.45■■□□□ 1.34
EDEM1-203ENST00000443790 AAMPQ13685 434 aa23.44■■□□□ 1.34
EDEM1-203ENST00000443790 RRP12Q5JTH9 1297 aaKnown RBP23.44■■□□□ 1.34
EDEM1-203ENST00000443790 BTNL9Q6UXG8 535 aa23.44■■□□□ 1.34
EDEM1-203ENST00000443790 NSMFQ6X4W1 530 aa23.44■■□□□ 1.34
EDEM1-203ENST00000443790 MYLIPQ8WY64 445 aa23.44■■□□□ 1.34
EDEM1-203ENST00000443790 TLR3O15455 904 aaKnown RBP23.43■■□□□ 1.34
EDEM1-203ENST00000443790 HSPD1P10809 573 aaKnown RBP23.43■■□□□ 1.34
EDEM1-203ENST00000443790 TOP1P11387 765 aaKnown RBP23.43■■□□□ 1.34
EDEM1-203ENST00000443790 TTBK2Q6IQ55 1244 aa23.43■■□□□ 1.34
EDEM1-203ENST00000443790 ZNF589Q86UQ0 364 aaPredicted RBP23.43■■□□□ 1.34
EDEM1-203ENST00000443790 FBXO16Q8IX29 292 aaPredicted RBP23.43■■□□□ 1.34
EDEM1-203ENST00000443790 TMEM47Q9BQJ4 181 aa23.43■■□□□ 1.34
EDEM1-203ENST00000443790 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.43■■□□□ 1.34
EDEM1-203ENST00000443790 TCP11L1Q9NUJ3 509 aa23.43■■□□□ 1.34
EDEM1-203ENST00000443790 SMPD1P17405 629 aa23.42■■□□□ 1.34
EDEM1-203ENST00000443790 SLC16A2P36021 539 aa23.42■■□□□ 1.34
EDEM1-203ENST00000443790 NMIQ13287 307 aaPredicted RBP23.42■■□□□ 1.34
EDEM1-203ENST00000443790 PPIGQ13427 754 aaKnown RBP eCLIP23.42■■□□□ 1.34
EDEM1-203ENST00000443790 FSCN1Q16658 493 aaKnown RBP23.42■■□□□ 1.34
EDEM1-203ENST00000443790 SYDE2Q5VT97 1194 aa23.42■■□□□ 1.34
EDEM1-203ENST00000443790 CXCL17Q6UXB2 119 aa23.42■■□□□ 1.34
EDEM1-203ENST00000443790 EEPD1Q7L9B9 569 aa23.42■■□□□ 1.34
EDEM1-203ENST00000443790 MAFAQ8NHW3 353 aaPredicted RBP23.42■■□□□ 1.34
EDEM1-203ENST00000443790 MORC4Q8TE76 937 aa23.42■■□□□ 1.34
EDEM1-203ENST00000443790 PDGFCQ9NRA1 345 aa23.42■■□□□ 1.34
EDEM1-203ENST00000443790 FRMPD2Q68DX3 1309 aaPredicted RBP23.41■■□□□ 1.34
EDEM1-203ENST00000443790 CCDC171Q6TFL3 1326 aa23.41■■□□□ 1.34
EDEM1-203ENST00000443790 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.41■■□□□ 1.34
EDEM1-203ENST00000443790 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.41■■□□□ 1.34
EDEM1-203ENST00000443790 CABYRO75952 493 aa23.41■■□□□ 1.34
EDEM1-203ENST00000443790 CD4P01730 458 aa23.41■■□□□ 1.34
EDEM1-203ENST00000443790 PTGS1P23219 599 aa23.41■■□□□ 1.34
EDEM1-203ENST00000443790 TAPT1Q6NXT6 567 aa23.41■■□□□ 1.34
EDEM1-203ENST00000443790 SLC43A3Q8NBI5 491 aa23.41■■□□□ 1.34
EDEM1-203ENST00000443790 PURBQ96QR8 312 aaKnown RBP23.41■■□□□ 1.34
EDEM1-203ENST00000443790 PPP1R12CQ9BZL4 782 aa23.41■■□□□ 1.34
EDEM1-203ENST00000443790 LNPKQ9C0E8 428 aa23.41■■□□□ 1.34
EDEM1-203ENST00000443790 AP5M1Q9H0R1 490 aa23.41■■□□□ 1.34
EDEM1-203ENST00000443790 VTA1Q9NP79 307 aa23.41■■□□□ 1.34
EDEM1-203ENST00000443790 PRUNE2Q8WUY3 3088 aa23.4■■□□□ 1.34
EDEM1-203ENST00000443790 CSF2RAP15509 400 aa23.4■■□□□ 1.34
EDEM1-203ENST00000443790 DNAJB2P25686 324 aa23.4■■□□□ 1.34
EDEM1-203ENST00000443790 HAND2P61296 217 aa23.4■■□□□ 1.34
EDEM1-203ENST00000443790 IQSEC1Q6DN90 963 aa23.4■■□□□ 1.34
EDEM1-203ENST00000443790 C16orf59Q7L2K0 433 aa23.4■■□□□ 1.34
EDEM1-203ENST00000443790 TMEM199Q8N511 208 aa23.4■■□□□ 1.34
EDEM1-203ENST00000443790 Q9Y3F1 56 aa23.4■■□□□ 1.34
EDEM1-203ENST00000443790 TRIM6-TRIM34B2RNG4 842 aa23.39■■□□□ 1.33
EDEM1-203ENST00000443790 NFIBO00712 420 aa23.39■■□□□ 1.33
EDEM1-203ENST00000443790 DYNC1LI2O43237 492 aaPredicted RBP23.39■■□□□ 1.33
EDEM1-203ENST00000443790 PDHBP11177 359 aa23.39■■□□□ 1.33
EDEM1-203ENST00000443790 PCP11498 1178 aaKnown RBP23.39■■□□□ 1.33
EDEM1-203ENST00000443790 FOSL2P15408 326 aa23.39■■□□□ 1.33
EDEM1-203ENST00000443790 BAATQ14032 418 aaPredicted RBP23.39■■□□□ 1.33
EDEM1-203ENST00000443790 TMEM240Q5SV17 173 aa23.39■■□□□ 1.33
EDEM1-203ENST00000443790 COL25A1Q9BXS0 654 aaPredicted RBP23.39■■□□□ 1.33
EDEM1-203ENST00000443790 RWDD1Q9H446 243 aaPredicted RBP23.39■■□□□ 1.33
EDEM1-203ENST00000443790 GPCPD1Q9NPB8 672 aa23.39■■□□□ 1.33
EDEM1-203ENST00000443790 ADD3Q9UEY8 706 aaKnown RBP23.39■■□□□ 1.33
EDEM1-203ENST00000443790 ZEB2O60315 1214 aa23.38■■□□□ 1.33
EDEM1-203ENST00000443790 IGHDP01880 384 aa23.38■■□□□ 1.33
EDEM1-203ENST00000443790 ALDH5A1P51649 535 aaPredicted RBP23.38■■□□□ 1.33
EDEM1-203ENST00000443790 ITGA7Q13683 1181 aa23.38■■□□□ 1.33
EDEM1-203ENST00000443790 AKNAD1Q5T1N1 836 aa23.38■■□□□ 1.33
EDEM1-203ENST00000443790 TMEM63BQ5T3F8 832 aa23.38■■□□□ 1.33
EDEM1-203ENST00000443790 RASIP1Q5U651 963 aa23.38■■□□□ 1.33
EDEM1-203ENST00000443790 PSRC1Q6PGN9 363 aaPredicted RBP23.38■■□□□ 1.33
EDEM1-203ENST00000443790 TBC1D10CQ8IV04 446 aa23.38■■□□□ 1.33
EDEM1-203ENST00000443790 GRIN2DO15399 1336 aa23.37■■□□□ 1.33
EDEM1-203ENST00000443790 LOC102724159A0A0B4J2E5 919 aa23.37■■□□□ 1.33
EDEM1-203ENST00000443790 CYP2C18P33260 490 aa23.37■■□□□ 1.33
EDEM1-203ENST00000443790 PWP2Q15269 919 aaKnown RBP23.37■■□□□ 1.33
EDEM1-203ENST00000443790 MFSD6Q6ZSS7 791 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms