RNA–Protein interactions for RNA: ENST00000442956.1

LINC00299-202, long intergenic non-protein coding RNA 299, humanhuman

TSL 2 BASIC

Gene LINC00299, Length 2,342 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299-202ENST00000442956 USP17L13C9JLJ4 530 aa16.59■□□□□ 0.25
LINC00299-202ENST00000442956 USP17L11C9JVI0 530 aa16.59■□□□□ 0.25
LINC00299-202ENST00000442956 USP17L18D6R9N7 530 aa16.59■□□□□ 0.25
LINC00299-202ENST00000442956 USP17L22D6RA61 530 aa16.59■□□□□ 0.25
LINC00299-202ENST00000442956 USP17L17D6RBQ6 530 aa16.59■□□□□ 0.25
LINC00299-202ENST00000442956 USP17L19D6RCP7 530 aa16.59■□□□□ 0.25
LINC00299-202ENST00000442956 USP17L20D6RJB6 530 aa16.59■□□□□ 0.25
LINC00299-202ENST00000442956 CAVIN2O95810 425 aa16.59■□□□□ 0.25
LINC00299-202ENST00000442956 LONP1P36776 959 aaKnown RBP16.59■□□□□ 0.25
LINC00299-202ENST00000442956 CCDC173Q0VFZ6 552 aa16.59■□□□□ 0.25
LINC00299-202ENST00000442956 USP17L24Q0WX57 530 aa16.59■□□□□ 0.25
LINC00299-202ENST00000442956 PNOCQ13519 176 aa16.59■□□□□ 0.25
LINC00299-202ENST00000442956 ZRSR1Q15695 479 aaKnown RBP16.59■□□□□ 0.25
LINC00299-202ENST00000442956 USP17L6PQ6QN14 398 aa16.59■□□□□ 0.25
LINC00299-202ENST00000442956 ZNF112Q9UJU3 913 aa16.59■□□□□ 0.25
LINC00299-202ENST00000442956 PPP2R3BQ9Y5P8 575 aa16.59■□□□□ 0.25
LINC00299-202ENST00000442956 ACTN4O43707 911 aaKnown RBP16.58■□□□□ 0.25
LINC00299-202ENST00000442956 PLA2G6O60733 806 aa16.58■□□□□ 0.25
LINC00299-202ENST00000442956 ORC2Q13416 577 aaPredicted RBP16.58■□□□□ 0.25
LINC00299-202ENST00000442956 C11orf57Q6ZUT1 292 aaPredicted RBP16.58■□□□□ 0.25
LINC00299-202ENST00000442956 LUZP1Q86V48 1076 aa16.58■□□□□ 0.25
LINC00299-202ENST00000442956 FAM160B2Q86V87 743 aa16.58■□□□□ 0.25
LINC00299-202ENST00000442956 ELOA2Q8IYF1 753 aaPredicted RBP16.58■□□□□ 0.25
LINC00299-202ENST00000442956 DHX58Q96C10 678 aa16.58■□□□□ 0.25
LINC00299-202ENST00000442956 WRNIP1Q96S55 665 aa16.58■□□□□ 0.25
LINC00299-202ENST00000442956 KIAA1683Q9H0B3 1180 aa16.58■□□□□ 0.25
LINC00299-202ENST00000442956 HOOK1Q9UJC3 728 aaKnown RBP16.58■□□□□ 0.25
LINC00299-202ENST00000442956 FEM1BQ9UK73 627 aa16.58■□□□□ 0.25
LINC00299-202ENST00000442956 FZD1Q9UP38 647 aa16.58■□□□□ 0.25
LINC00299-202ENST00000442956 BIN1O00499 593 aa16.58■□□□□ 0.24
LINC00299-202ENST00000442956 OR52Z1P0C646 297 aa16.58■□□□□ 0.24
LINC00299-202ENST00000442956 TAL1P17542 331 aaPredicted RBP16.58■□□□□ 0.24
LINC00299-202ENST00000442956 PRPHP41219 470 aa16.58■□□□□ 0.24
LINC00299-202ENST00000442956 ZKSCAN4Q969J2 545 aaPredicted RBP16.58■□□□□ 0.24
LINC00299-202ENST00000442956 PPP1R9BQ96SB3 815 aa16.58■□□□□ 0.24
LINC00299-202ENST00000442956 FBXO28Q9NVF7 368 aa16.58■□□□□ 0.24
LINC00299-202ENST00000442956 MEIS2O14770 477 aa16.57■□□□□ 0.24
LINC00299-202ENST00000442956 FOXN1O15353 648 aa16.57■□□□□ 0.24
LINC00299-202ENST00000442956 EDIL3O43854 480 aa16.57■□□□□ 0.24
LINC00299-202ENST00000442956 MDM2Q00987 491 aaPredicted RBP16.57■□□□□ 0.24
LINC00299-202ENST00000442956 SAMD1Q6SPF0 538 aaPredicted RBP16.57■□□□□ 0.24
LINC00299-202ENST00000442956 SCYL3Q8IZE3 742 aa16.57■□□□□ 0.24
LINC00299-202ENST00000442956 TUBE1Q9UJT0 475 aa16.57■□□□□ 0.24
LINC00299-202ENST00000442956 TDP2O95551 362 aa16.57■□□□□ 0.24
LINC00299-202ENST00000442956 POSTNQ15063 836 aa16.57■□□□□ 0.24
LINC00299-202ENST00000442956 KANK3Q6NY19 840 aa16.57■□□□□ 0.24
LINC00299-202ENST00000442956 POTEDQ86YR6 584 aa16.57■□□□□ 0.24
LINC00299-202ENST00000442956 LPAR1Q92633 364 aa16.57■□□□□ 0.24
LINC00299-202ENST00000442956 RANBP17Q9H2T7 1088 aaKnown RBP16.57■□□□□ 0.24
LINC00299-202ENST00000442956 USP25Q9UHP3 1055 aa16.57■□□□□ 0.24
LINC00299-202ENST00000442956 PITPNM2Q9BZ72 1349 aa16.56■□□□□ 0.24
LINC00299-202ENST00000442956 SLFN14P0C7P3 912 aa16.56■□□□□ 0.24
LINC00299-202ENST00000442956 CDC25AP30304 524 aa16.56■□□□□ 0.24
LINC00299-202ENST00000442956 TRAF1Q13077 416 aa16.56■□□□□ 0.24
LINC00299-202ENST00000442956 SUPT20HL1Q3ZLR7 823 aa16.56■□□□□ 0.24
LINC00299-202ENST00000442956 CCDC174Q6PII3 467 aa16.56■□□□□ 0.24
LINC00299-202ENST00000442956 PICK1Q9NRD5 415 aa16.56■□□□□ 0.24
LINC00299-202ENST00000442956 WDR46O15213 610 aaKnown RBP16.56■□□□□ 0.24
LINC00299-202ENST00000442956 TXLNAP40222 546 aa16.56■□□□□ 0.24
LINC00299-202ENST00000442956 DGKZQ13574 1117 aa16.56■□□□□ 0.24
LINC00299-202ENST00000442956 MTMR2Q13614 643 aa16.56■□□□□ 0.24
LINC00299-202ENST00000442956 DPCR1Q3MIW9 517 aa16.56■□□□□ 0.24
LINC00299-202ENST00000442956 GRAMD1CQ8IYS0 662 aa16.56■□□□□ 0.24
LINC00299-202ENST00000442956 CEP57L1Q8IYX8 460 aa16.56■□□□□ 0.24
LINC00299-202ENST00000442956 PCDHA5Q9Y5H7 936 aa16.56■□□□□ 0.24
LINC00299-202ENST00000442956 OPLAHO14841 1288 aa16.55■□□□□ 0.24
LINC00299-202ENST00000442956 SLC37A4O43826 429 aa16.55■□□□□ 0.24
LINC00299-202ENST00000442956 NLRP12P59046 1061 aa16.55■□□□□ 0.24
LINC00299-202ENST00000442956 SPP2Q13103 211 aa16.55■□□□□ 0.24
LINC00299-202ENST00000442956 AP3B2Q13367 1082 aa16.55■□□□□ 0.24
LINC00299-202ENST00000442956 CALCRLQ16602 461 aa16.55■□□□□ 0.24
LINC00299-202ENST00000442956 PPP4R3AQ6IN85 833 aa16.55■□□□□ 0.24
LINC00299-202ENST00000442956 KLRG1Q96E93 195 aa16.55■□□□□ 0.24
LINC00299-202ENST00000442956 CCDC34Q96HJ3 373 aa16.55■□□□□ 0.24
LINC00299-202ENST00000442956 PDLIM2Q96JY6 352 aa16.55■□□□□ 0.24
LINC00299-202ENST00000442956 ANO3Q9BYT9 981 aa16.55■□□□□ 0.24
LINC00299-202ENST00000442956 SSC5DA1L4H1 1573 aa16.55■□□□□ 0.24
LINC00299-202ENST00000442956 PP2D1A8MPX8 630 aa16.54■□□□□ 0.24
LINC00299-202ENST00000442956 PTPRAP18433 802 aa16.54■□□□□ 0.24
LINC00299-202ENST00000442956 ISM2Q6H9L7 571 aa16.54■□□□□ 0.24
LINC00299-202ENST00000442956 IQUBQ8NA54 791 aa16.54■□□□□ 0.24
LINC00299-202ENST00000442956 PYM1Q9BRP8 204 aaKnown RBP16.54■□□□□ 0.24
LINC00299-202ENST00000442956 WDR18Q9BV38 432 aa16.54■□□□□ 0.24
LINC00299-202ENST00000442956 NAT10Q9H0A0 1025 aaKnown RBP16.54■□□□□ 0.24
LINC00299-202ENST00000442956 PRR29P0C7W0 189 aa16.54■□□□□ 0.24
LINC00299-202ENST00000442956 PLCB2Q00722 1185 aa16.54■□□□□ 0.24
LINC00299-202ENST00000442956 IQCB1Q15051 598 aa16.54■□□□□ 0.24
LINC00299-202ENST00000442956 E2F4Q16254 413 aa16.54■□□□□ 0.24
LINC00299-202ENST00000442956 MCTP2Q6DN12 878 aa16.54■□□□□ 0.24
LINC00299-202ENST00000442956 DPY19L2Q6NUT2 758 aa16.54■□□□□ 0.24
LINC00299-202ENST00000442956 DCPSQ96C86 337 aaKnown RBP16.54■□□□□ 0.24
LINC00299-202ENST00000442956 MTMR9Q96QG7 549 aa16.54■□□□□ 0.24
LINC00299-202ENST00000442956 P2RX7Q99572 595 aaKnown RBP16.54■□□□□ 0.24
LINC00299-202ENST00000442956 EMILIN3Q9NT22 766 aa16.54■□□□□ 0.24
LINC00299-202ENST00000442956 VCAM1P19320 739 aa16.53■□□□□ 0.24
LINC00299-202ENST00000442956 UBA7P41226 1012 aa16.53■□□□□ 0.24
LINC00299-202ENST00000442956 GPR162Q16538 588 aa16.53■□□□□ 0.24
LINC00299-202ENST00000442956 DLK2Q6UY11 383 aa16.53■□□□□ 0.24
LINC00299-202ENST00000442956 SLF1Q9BQI6 1058 aa16.53■□□□□ 0.24
LINC00299-202ENST00000442956 AS3MTQ9HBK9 375 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms