RNA–Protein interactions for RNA: ENST00000442510.6

PTPRC-209, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRC, Length 5,164 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-209ENST00000442510 ACTN1P12814 892 aa6.11□□□□□ -1.43
PTPRC-209ENST00000442510 ATP5JP18859 108 aa6.11□□□□□ -1.43
PTPRC-209ENST00000442510 GSTT1P30711 240 aa6.11□□□□□ -1.43
PTPRC-209ENST00000442510 FCHO2Q0JRZ9 810 aa6.11□□□□□ -1.43
PTPRC-209ENST00000442510 C6orf118Q5T5N4 469 aa6.11□□□□□ -1.43
PTPRC-209ENST00000442510 TWF2Q6IBS0 349 aaKnown RBP6.11□□□□□ -1.43
PTPRC-209ENST00000442510 CYP26C1Q6V0L0 522 aa6.11□□□□□ -1.43
PTPRC-209ENST00000442510 DNAJC14Q6Y2X3 702 aaPredicted RBP6.11□□□□□ -1.43
PTPRC-209ENST00000442510 SESTD1Q86VW0 696 aa6.11□□□□□ -1.43
PTPRC-209ENST00000442510 UBL4BQ8N7F7 174 aa6.11□□□□□ -1.43
PTPRC-209ENST00000442510 GIPC2Q8TF65 315 aa6.11□□□□□ -1.43
PTPRC-209ENST00000442510 UBLCP1Q8WVY7 318 aaPredicted RBP6.11□□□□□ -1.43
PTPRC-209ENST00000442510 SCG3Q8WXD2 468 aaKnown RBP6.11□□□□□ -1.43
PTPRC-209ENST00000442510 ZSCAN31Q96LW9 406 aaPredicted RBP6.11□□□□□ -1.43
PTPRC-209ENST00000442510 C1orf115Q9H7X2 142 aa6.11□□□□□ -1.43
PTPRC-209ENST00000442510 PARVGQ9HBI0 331 aa6.11□□□□□ -1.43
PTPRC-209ENST00000442510 FKBP14Q9NWM8 211 aa6.11□□□□□ -1.43
PTPRC-209ENST00000442510 MAFFQ9ULX9 164 aa6.11□□□□□ -1.43
PTPRC-209ENST00000442510 SUGT1Q9Y2Z0 365 aa6.11□□□□□ -1.43
PTPRC-209ENST00000442510 CAB39Q9Y376 341 aaPredicted RBP6.11□□□□□ -1.43
PTPRC-209ENST00000442510 NPC1L1Q9UHC9 1359 aa6.1□□□□□ -1.43
PTPRC-209ENST00000442510 DCTN3O75935 186 aa6.1□□□□□ -1.43
PTPRC-209ENST00000442510 ZSCAN22P10073 491 aaPredicted RBP6.1□□□□□ -1.43
PTPRC-209ENST00000442510 EPB41P11171 864 aaKnown RBP6.1□□□□□ -1.43
PTPRC-209ENST00000442510 CD53P19397 219 aa6.1□□□□□ -1.43
PTPRC-209ENST00000442510 TRPC1P48995 793 aa6.1□□□□□ -1.43
PTPRC-209ENST00000442510 IRAK1P51617 712 aa6.1□□□□□ -1.43
PTPRC-209ENST00000442510 TRIM16LQ309B1 348 aa6.1□□□□□ -1.43
PTPRC-209ENST00000442510 SPATA1Q5VX52 437 aa6.1□□□□□ -1.43
PTPRC-209ENST00000442510 CROCCP2Q86T23 111 aa6.1□□□□□ -1.43
PTPRC-209ENST00000442510 CDH24Q86UP0 819 aa6.1□□□□□ -1.43
PTPRC-209ENST00000442510 TTLL11Q8NHH1 800 aa6.1□□□□□ -1.43
PTPRC-209ENST00000442510 NUP88Q99567 741 aaPredicted RBP6.1□□□□□ -1.43
PTPRC-209ENST00000442510 MKS1Q9NXB0 559 aa6.1□□□□□ -1.43
PTPRC-209ENST00000442510 TMEM98Q9Y2Y6 226 aa6.1□□□□□ -1.43
PTPRC-209ENST00000442510 GPC6Q9Y625 555 aaPredicted RBP6.1□□□□□ -1.43
PTPRC-209ENST00000442510 GOLGA8RI6L899 631 aa6.1□□□□□ -1.43
PTPRC-209ENST00000442510 RPS6KA5O75582 802 aa6.1□□□□□ -1.43
PTPRC-209ENST00000442510 NR1D1P20393 614 aa6.1□□□□□ -1.43
PTPRC-209ENST00000442510 EEF1DP29692 281 aaKnown RBP6.1□□□□□ -1.43
PTPRC-209ENST00000442510 STX1BP61266 288 aa6.1□□□□□ -1.43
PTPRC-209ENST00000442510 KPNB1Q14974 876 aaKnown RBP6.1□□□□□ -1.43
PTPRC-209ENST00000442510 R3HDM1Q15032 1099 aaKnown RBP6.1□□□□□ -1.43
PTPRC-209ENST00000442510 HSP90AA4PQ58FG1 418 aa6.1□□□□□ -1.43
PTPRC-209ENST00000442510 C8orf74Q6P047 294 aa6.1□□□□□ -1.43
PTPRC-209ENST00000442510 PRR23CQ6ZRP0 262 aa6.1□□□□□ -1.43
PTPRC-209ENST00000442510 ANKRD49Q8WVL7 239 aa6.1□□□□□ -1.43
PTPRC-209ENST00000442510 CNNM2Q9H8M5 875 aa6.1□□□□□ -1.43
PTPRC-209ENST00000442510 PPCSQ9HAB8 311 aa6.1□□□□□ -1.43
PTPRC-209ENST00000442510 TRIM39Q9HCM9 518 aa6.1□□□□□ -1.43
PTPRC-209ENST00000442510 ATAD3AQ9NVI7 634 aa6.1□□□□□ -1.43
PTPRC-209ENST00000442510 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.1□□□□□ -1.43
PTPRC-209ENST00000442510 CDC23Q9UJX2 597 aa6.1□□□□□ -1.43
PTPRC-209ENST00000442510 RNF123Q5XPI4 1314 aa6.1□□□□□ -1.43
PTPRC-209ENST00000442510 WDR91A4D1P6 747 aa6.1□□□□□ -1.43
PTPRC-209ENST00000442510 MATN2O00339 956 aa6.1□□□□□ -1.43
PTPRC-209ENST00000442510 STX17P56962 302 aa6.1□□□□□ -1.43
PTPRC-209ENST00000442510 PDIA5Q14554 519 aa6.1□□□□□ -1.43
PTPRC-209ENST00000442510 TBC1D25Q3MII6 688 aa6.1□□□□□ -1.43
PTPRC-209ENST00000442510 MIS18BP1Q6P0N0 1132 aa6.1□□□□□ -1.43
PTPRC-209ENST00000442510 TRAF7Q6Q0C0 670 aa6.1□□□□□ -1.43
PTPRC-209ENST00000442510 NLRP14Q86W24 1093 aa6.1□□□□□ -1.43
PTPRC-209ENST00000442510 CROCCP3Q8IVE0 287 aa6.1□□□□□ -1.43
PTPRC-209ENST00000442510 KRI1Q8N9T8 703 aaKnown RBP6.1□□□□□ -1.43
PTPRC-209ENST00000442510 THAP11Q96EK4 314 aa6.1□□□□□ -1.43
PTPRC-209ENST00000442510 RUNDC3BQ96NL0 473 aa6.1□□□□□ -1.43
PTPRC-209ENST00000442510 NKIRAS1Q9NYS0 192 aa6.1□□□□□ -1.43
PTPRC-209ENST00000442510 RTEL1Q9NZ71 1219 aa6.1□□□□□ -1.43
PTPRC-209ENST00000442510 TMEM247A6NEH6 219 aa6.1□□□□□ -1.43
PTPRC-209ENST00000442510 KRT86O43790 486 aa6.1□□□□□ -1.43
PTPRC-209ENST00000442510 BCAR3O75815 825 aa6.1□□□□□ -1.43
PTPRC-209ENST00000442510 KRT3P12035 628 aa6.1□□□□□ -1.43
PTPRC-209ENST00000442510 PEX5P50542 639 aa6.1□□□□□ -1.43
PTPRC-209ENST00000442510 TSC22D1Q15714 1073 aa6.1□□□□□ -1.43
PTPRC-209ENST00000442510 CFAP61Q8NHU2 1237 aa6.1□□□□□ -1.43
PTPRC-209ENST00000442510 CORO1BQ9BR76 489 aa6.1□□□□□ -1.43
PTPRC-209ENST00000442510 KAT14Q9H8E8 782 aa6.1□□□□□ -1.43
PTPRC-209ENST00000442510 DDX20Q9UHI6 824 aaKnown RBP6.1□□□□□ -1.43
PTPRC-209ENST00000442510 CEP164Q9UPV0 1460 aa6.09□□□□□ -1.43
PTPRC-209ENST00000442510 EXTL3O43909 919 aa6.09□□□□□ -1.43
PTPRC-209ENST00000442510 MYL6BP14649 208 aa6.09□□□□□ -1.43
PTPRC-209ENST00000442510 ADD2P35612 726 aa6.09□□□□□ -1.43
PTPRC-209ENST00000442510 MSH2P43246 934 aa6.09□□□□□ -1.43
PTPRC-209ENST00000442510 COX10Q12887 443 aa6.09□□□□□ -1.43
PTPRC-209ENST00000442510 NNTQ13423 1086 aa6.09□□□□□ -1.43
PTPRC-209ENST00000442510 FSCBQ5H9T9 825 aa6.09□□□□□ -1.43
PTPRC-209ENST00000442510 HDAC7Q8WUI4 952 aa6.09□□□□□ -1.43
PTPRC-209ENST00000442510 PPP2R3CQ969Q6 453 aa6.09□□□□□ -1.43
PTPRC-209ENST00000442510 NMD3Q96D46 503 aaKnown RBP6.09□□□□□ -1.43
PTPRC-209ENST00000442510 TRPV6Q9H1D0 765 aa6.09□□□□□ -1.43
PTPRC-209ENST00000442510 PREBQ9HCU5 417 aa6.09□□□□□ -1.43
PTPRC-209ENST00000442510 KCNK9Q9NPC2 374 aa6.09□□□□□ -1.43
PTPRC-209ENST00000442510 POLE3Q9NRF9 147 aa6.09□□□□□ -1.43
PTPRC-209ENST00000442510 ZNF277Q9NRM2 450 aaPredicted RBP6.09□□□□□ -1.43
PTPRC-209ENST00000442510 SCAPERQ9BY12 1400 aa6.09□□□□□ -1.43
PTPRC-209ENST00000442510 SH3D21A4FU49 640 aa6.09□□□□□ -1.43
PTPRC-209ENST00000442510 ANKRD33BA6NCL7 494 aa6.09□□□□□ -1.43
PTPRC-209ENST00000442510 RANBP6O60518 1105 aaKnown RBP6.09□□□□□ -1.43
PTPRC-209ENST00000442510 WBP4O75554 376 aaKnown RBP6.09□□□□□ -1.43
PTPRC-209ENST00000442510 ATP5HO75947 161 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms