RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 KRT24Q2M2I5 525 aa3.09□□□□□ -1.92
LIG4-203ENST00000442234 ZNF394Q53GI3 561 aa3.09□□□□□ -1.92
LIG4-203ENST00000442234 FAAH2Q6GMR7 532 aa3.09□□□□□ -1.92
LIG4-203ENST00000442234 GALNT17Q6IS24 598 aa3.09□□□□□ -1.92
LIG4-203ENST00000442234 ELOA2Q8IYF1 753 aaPredicted RBP3.09□□□□□ -1.92
LIG4-203ENST00000442234 CCDC155Q8N6L0 562 aa3.09□□□□□ -1.92
LIG4-203ENST00000442234 OR8K1Q8NGG5 319 aa3.09□□□□□ -1.92
LIG4-203ENST00000442234 CLIC6Q96NY7 704 aa3.09□□□□□ -1.92
LIG4-203ENST00000442234 MPHOSPH8Q99549 860 aa3.09□□□□□ -1.92
LIG4-203ENST00000442234 OSBPL1AQ9BXW6 950 aa3.09□□□□□ -1.92
LIG4-203ENST00000442234 RNF208Q9H0X6 261 aa3.09□□□□□ -1.92
LIG4-203ENST00000442234 VCX3BQ9H321 246 aa3.09□□□□□ -1.92
LIG4-203ENST00000442234 VCX3AQ9NNX9 186 aa3.09□□□□□ -1.92
LIG4-203ENST00000442234 DDX21Q9NR30 783 aaKnown RBP eCLIP3.09□□□□□ -1.92
LIG4-203ENST00000442234 EXOC1Q9NV70 894 aa3.09□□□□□ -1.92
LIG4-203ENST00000442234 CWC25Q9NXE8 425 aaPredicted RBP3.09□□□□□ -1.92
LIG4-203ENST00000442234 TRPM1Q7Z4N2 1603 aa3.09□□□□□ -1.92
LIG4-203ENST00000442234 IRS2Q9Y4H2 1338 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 MAP3K7O43318 606 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 SH3BP5O60239 455 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 ITGBL1O95965 494 aaPredicted RBP3.08□□□□□ -1.92
LIG4-203ENST00000442234 TFRCP02786 760 aaKnown RBP3.08□□□□□ -1.92
LIG4-203ENST00000442234 ALOX15P16050 662 aaPredicted RBP3.08□□□□□ -1.92
LIG4-203ENST00000442234 PPFIA1Q13136 1202 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 PDIA5Q14554 519 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 DIXDC1Q155Q3 683 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 CYB5D1Q6P9G0 228 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 TTLL7Q6ZT98 887 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 CCDC84Q86UT8 332 aaPredicted RBP3.08□□□□□ -1.92
LIG4-203ENST00000442234 IGSF22Q8N9C0 903 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 PXYLP1Q8TE99 480 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 SREK1Q8WXA9 508 aaKnown RBP3.08□□□□□ -1.92
LIG4-203ENST00000442234 JAKMIP2Q96AA8 810 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 NR1H4Q96RI1 486 aaPredicted RBP3.08□□□□□ -1.92
LIG4-203ENST00000442234 CENPOQ9BU64 300 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 USP26Q9BXU7 913 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 VCXQ9H320 206 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 GBA2Q9HCG7 927 aaPredicted RBP3.08□□□□□ -1.92
LIG4-203ENST00000442234 ABCB6Q9NP58 842 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 MRGBPQ9NV56 204 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 GALNT8Q9NY28 637 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 NOP53Q9NZM5 478 aaKnown RBP3.08□□□□□ -1.92
LIG4-203ENST00000442234 TBC1D7Q9P0N9 293 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 KIAA1468Q9P260 1216 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 TNNQ9UQP3 1299 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 PRELID1Q9Y255 219 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 USH1CQ9Y6N9 552 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 UNC13BO14795 1591 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 CFAP74Q9C0B2 1584 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 CASZ1Q86V15 1759 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 PIK3C2BO00750 1634 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 EIF2AK4Q9P2K8 1649 aaKnown RBP3.08□□□□□ -1.92
LIG4-203ENST00000442234 KNL1Q8NG31 2342 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 SPTBN4Q9H254 2564 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.08□□□□□ -1.92
LIG4-203ENST00000442234 CTAGE15A4D2H0 777 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 CETN3O15182 167 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 PPFIA3O75145 1194 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 SUPT3HO75486 399 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 RPS6KA4O75676 772 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 RNF8O76064 485 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 TUBBP07437 444 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 CTAGE8P0CG41 777 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 MCM3P25205 808 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 DNAJB2P25686 324 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 PSEN2P49810 448 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 STIM1Q13586 685 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 EIF4A2Q14240 407 aaKnown RBP3.08□□□□□ -1.92
LIG4-203ENST00000442234 WLSQ5T9L3 541 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 GKAP1Q5VSY0 366 aaPredicted RBP3.08□□□□□ -1.92
LIG4-203ENST00000442234 HIBCHQ6NVY1 386 aaPredicted RBP3.08□□□□□ -1.92
LIG4-203ENST00000442234 PADI6Q6TGC4 694 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 BZW1Q7L1Q6 419 aaKnown RBP3.08□□□□□ -1.92
LIG4-203ENST00000442234 TRMT1LQ7Z2T5 733 aaKnown RBP3.08□□□□□ -1.92
LIG4-203ENST00000442234 CTAGE6Q86UF2 777 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 CTAGE4Q8IX94 777 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 CCDC148Q8NFR7 591 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 RAET1EQ8TD07 263 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 TRPM4Q8TD43 1214 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 MAIP1Q8WWC4 291 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 DHRS1Q96LJ7 313 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 GDAP1L1Q96MZ0 367 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 SEC62Q99442 399 aaKnown RBP3.08□□□□□ -1.92
LIG4-203ENST00000442234 PAGR1Q9BTK6 254 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 UPF3BQ9BZI7 483 aaKnown RBP3.08□□□□□ -1.92
LIG4-203ENST00000442234 SRCIN1Q9C0H9 1055 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 KAT14Q9H8E8 782 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 ACTR5Q9H9F9 607 aaPredicted RBP3.08□□□□□ -1.92
LIG4-203ENST00000442234 CDHR5Q9HBB8 845 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 SLC39A2Q9NP94 309 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 ANO2Q9NQ90 1003 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 DDX19AQ9NUU7 478 aaKnown RBP3.08□□□□□ -1.92
LIG4-203ENST00000442234 ANO10Q9NW15 660 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 DACT1Q9NYF0 836 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 STAP2Q9UGK3 403 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 SYNPO2Q9UMS6 1093 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 ATP8A1Q9Y2Q0 1164 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 GRXCR2A6NFK2 248 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 NFKBIEO00221 500 aa3.08□□□□□ -1.92
LIG4-203ENST00000442234 DIAPH1O60610 1272 aaKnown RBP3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms