RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 TCP11L1Q9NUJ3 509 aa13.86□□□□□ -0.19
TTC28-203ENST00000442232 FRMPD2Q68DX3 1309 aaPredicted RBP13.86□□□□□ -0.19
TTC28-203ENST00000442232 KIAA0355O15063 1070 aa13.85□□□□□ -0.19
TTC28-203ENST00000442232 ZEB2O60315 1214 aa13.85□□□□□ -0.19
TTC28-203ENST00000442232 ASGR1P07306 291 aa13.85□□□□□ -0.19
TTC28-203ENST00000442232 SDSP20132 328 aa13.85□□□□□ -0.19
TTC28-203ENST00000442232 NT5C2P49902 561 aa13.85□□□□□ -0.19
TTC28-203ENST00000442232 SHHQ15465 462 aa13.85□□□□□ -0.19
TTC28-203ENST00000442232 AKNAD1Q5T1N1 836 aa13.85□□□□□ -0.19
TTC28-203ENST00000442232 ANKRD33Q7Z3H0 272 aa13.85□□□□□ -0.19
TTC28-203ENST00000442232 RNPC3Q96LT9 517 aaKnown RBP13.85□□□□□ -0.19
TTC28-203ENST00000442232 MPHOSPH6Q99547 160 aaKnown RBP13.85□□□□□ -0.19
TTC28-203ENST00000442232 RANBP17Q9H2T7 1088 aaKnown RBP13.85□□□□□ -0.19
TTC28-203ENST00000442232 MTMR10Q9NXD2 777 aa13.85□□□□□ -0.19
TTC28-203ENST00000442232 CYP39A1Q9NYL5 469 aa13.85□□□□□ -0.19
TTC28-203ENST00000442232 ADD3Q9UEY8 706 aaKnown RBP13.85□□□□□ -0.19
TTC28-203ENST00000442232 STXBP5LQ9Y2K9 1186 aa13.85□□□□□ -0.19
TTC28-203ENST00000442232 LCTP09848 1927 aa13.84□□□□□ -0.19
TTC28-203ENST00000442232 PTPDC1A2A3K4 754 aa13.84□□□□□ -0.19
TTC28-203ENST00000442232 MYADML2A6NDP7 307 aa13.84□□□□□ -0.19
TTC28-203ENST00000442232 ZNF213O14771 459 aa13.84□□□□□ -0.19
TTC28-203ENST00000442232 SLC16A2P36021 539 aa13.84□□□□□ -0.19
TTC28-203ENST00000442232 NOVP48745 357 aa13.84□□□□□ -0.19
TTC28-203ENST00000442232 NUCB1Q02818 461 aa13.84□□□□□ -0.19
TTC28-203ENST00000442232 CCDC178Q5BJE1 867 aa13.84□□□□□ -0.19
TTC28-203ENST00000442232 MUM1L1Q5H9M0 696 aa13.84□□□□□ -0.19
TTC28-203ENST00000442232 FAM109BQ6ICB4 259 aaPredicted RBP13.84□□□□□ -0.19
TTC28-203ENST00000442232 RASGRP2Q7LDG7 609 aa13.84□□□□□ -0.19
TTC28-203ENST00000442232 TLK2Q86UE8 772 aa13.84□□□□□ -0.19
TTC28-203ENST00000442232 PLEKHM2Q8IWE5 1019 aa13.84□□□□□ -0.19
TTC28-203ENST00000442232 TTC14Q96N46 770 aa13.84□□□□□ -0.19
TTC28-203ENST00000442232 VTA1Q9NP79 307 aa13.84□□□□□ -0.19
TTC28-203ENST00000442232 SOWAHBA6NEL2 793 aa13.83□□□□□ -0.2
TTC28-203ENST00000442232 CABYRO75952 493 aa13.83□□□□□ -0.2
TTC28-203ENST00000442232 FAAP100Q0VG06 881 aa13.83□□□□□ -0.2
TTC28-203ENST00000442232 C9orf50Q5SZB4 431 aa13.83□□□□□ -0.2
TTC28-203ENST00000442232 CCSAPQ6IQ19 270 aaPredicted RBP13.83□□□□□ -0.2
TTC28-203ENST00000442232 TTBK2Q6IQ55 1244 aa13.83□□□□□ -0.2
TTC28-203ENST00000442232 CWC27Q6UX04 472 aaKnown RBP13.83□□□□□ -0.2
TTC28-203ENST00000442232 BTNL9Q6UXG8 535 aa13.83□□□□□ -0.2
TTC28-203ENST00000442232 IQCA1Q86XH1 822 aa13.83□□□□□ -0.2
TTC28-203ENST00000442232 FBXO16Q8IX29 292 aaPredicted RBP13.83□□□□□ -0.2
TTC28-203ENST00000442232 FAM161BQ96MY7 647 aa13.83□□□□□ -0.2
TTC28-203ENST00000442232 OSBPL3Q9H4L5 887 aa13.83□□□□□ -0.2
TTC28-203ENST00000442232 MYH6P13533 1939 aa13.83□□□□□ -0.2
TTC28-203ENST00000442232 LOC102724159A0A0B4J2E5 919 aa13.82□□□□□ -0.2
TTC28-203ENST00000442232 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.82□□□□□ -0.2
TTC28-203ENST00000442232 B4DLN1 442 aa13.82□□□□□ -0.2
TTC28-203ENST00000442232 ARVCFO00192 962 aa13.82□□□□□ -0.2
TTC28-203ENST00000442232 ADCY6O43306 1168 aa13.82□□□□□ -0.2
TTC28-203ENST00000442232 PDHBP11177 359 aa13.82□□□□□ -0.2
TTC28-203ENST00000442232 MRPL12P52815 198 aaKnown RBP13.82□□□□□ -0.2
TTC28-203ENST00000442232 SMAD3P84022 425 aaKnown RBP13.82□□□□□ -0.2
TTC28-203ENST00000442232 BEX3Q00994 111 aa13.82□□□□□ -0.2
TTC28-203ENST00000442232 PPIGQ13427 754 aaKnown RBP eCLIP13.82□□□□□ -0.28e-7■■■□□ 14.9
TTC28-203ENST00000442232 PWP2Q15269 919 aaKnown RBP13.82□□□□□ -0.2
TTC28-203ENST00000442232 GPATCH4Q5T3I0 446 aaKnown RBP13.82□□□□□ -0.2
TTC28-203ENST00000442232 IQSEC1Q6DN90 963 aa13.82□□□□□ -0.2
TTC28-203ENST00000442232 EEPD1Q7L9B9 569 aa13.82□□□□□ -0.2
TTC28-203ENST00000442232 TBC1D10CQ8IV04 446 aa13.82□□□□□ -0.2
TTC28-203ENST00000442232 EXOC6Q8TAG9 804 aa13.82□□□□□ -0.2
TTC28-203ENST00000442232 KATNBL1Q9H079 304 aa13.82□□□□□ -0.2
TTC28-203ENST00000442232 KAT14Q9H8E8 782 aa13.82□□□□□ -0.2
TTC28-203ENST00000442232 TIMP1P01033 207 aa13.81□□□□□ -0.2
TTC28-203ENST00000442232 CALML3P27482 149 aa13.81□□□□□ -0.2
TTC28-203ENST00000442232 ALDH5A1P51649 535 aaPredicted RBP13.81□□□□□ -0.2
TTC28-203ENST00000442232 ZNF543Q08ER8 600 aa13.81□□□□□ -0.2
TTC28-203ENST00000442232 BAATQ14032 418 aaPredicted RBP13.81□□□□□ -0.2
TTC28-203ENST00000442232 FSCN1Q16658 493 aaKnown RBP13.81□□□□□ -0.2
TTC28-203ENST00000442232 IMMTQ16891 758 aaKnown RBP13.81□□□□□ -0.2
TTC28-203ENST00000442232 KIAA1211Q6ZU35 1233 aa13.81□□□□□ -0.2
TTC28-203ENST00000442232 TMEM199Q8N511 208 aa13.81□□□□□ -0.2
TTC28-203ENST00000442232 CTNNA3Q9UI47 895 aa13.81□□□□□ -0.2
TTC28-203ENST00000442232 NEDD4P46934 1319 aa13.81□□□□□ -0.2
TTC28-203ENST00000442232 WDR19Q8NEZ3 1342 aa13.81□□□□□ -0.2
TTC28-203ENST00000442232 NFIBO00712 420 aa13.8□□□□□ -0.2
TTC28-203ENST00000442232 DYNC1LI2O43237 492 aaPredicted RBP13.8□□□□□ -0.2
TTC28-203ENST00000442232 KDM4AO75164 1064 aa13.8□□□□□ -0.2
TTC28-203ENST00000442232 IGHDP01880 384 aa13.8□□□□□ -0.2
TTC28-203ENST00000442232 NKX3-2P78367 333 aa13.8□□□□□ -0.2
TTC28-203ENST00000442232 IRX5P78411 483 aaPredicted RBP13.8□□□□□ -0.2
TTC28-203ENST00000442232 PDE4DQ08499 809 aa13.8□□□□□ -0.2
TTC28-203ENST00000442232 BRDTQ58F21 947 aaPredicted RBP13.8□□□□□ -0.2
TTC28-203ENST00000442232 MFSD5Q6N075 450 aa13.8□□□□□ -0.2
TTC28-203ENST00000442232 RNF207Q6ZRF8 634 aa13.8□□□□□ -0.2
TTC28-203ENST00000442232 DGKHQ86XP1 1220 aa13.8□□□□□ -0.2
TTC28-203ENST00000442232 ZKSCAN3Q9BRR0 538 aa13.8□□□□□ -0.2
TTC28-203ENST00000442232 DSCC1Q9BVC3 393 aa13.8□□□□□ -0.2
TTC28-203ENST00000442232 SEZ6LQ9BYH1 1024 aa13.8□□□□□ -0.2
TTC28-203ENST00000442232 CNNM2Q9H8M5 875 aa13.8□□□□□ -0.2
TTC28-203ENST00000442232 TBX21Q9UL17 535 aa13.8□□□□□ -0.2
TTC28-203ENST00000442232 GNEQ9Y223 722 aaKnown RBP13.8□□□□□ -0.2
TTC28-203ENST00000442232 Q9Y3F1 56 aa13.8□□□□□ -0.2
TTC28-203ENST00000442232 RAD50Q92878 1312 aa13.8□□□□□ -0.2
TTC28-203ENST00000442232 DHX16O60231 1041 aaKnown RBP13.79□□□□□ -0.2
TTC28-203ENST00000442232 SNHG28P0DPA3 235 aa13.79□□□□□ -0.2
TTC28-203ENST00000442232 SMPD1P17405 629 aa13.79□□□□□ -0.2
TTC28-203ENST00000442232 ITGB8P26012 769 aa13.79□□□□□ -0.2
TTC28-203ENST00000442232 CDK7P50613 346 aa13.79□□□□□ -0.2
TTC28-203ENST00000442232 USH1GQ495M9 461 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms